RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 RUNX1T1Q06455 604 aa16.04■□□□□ 0.16
CAPN1-203ENST00000525013 RAB39AQ14964 217 aa16.04■□□□□ 0.16
CAPN1-203ENST00000525013 LAPTM4AQ15012 233 aa16.04■□□□□ 0.16
CAPN1-203ENST00000525013 HDDC2Q7Z4H3 204 aa16.04■□□□□ 0.16
CAPN1-203ENST00000525013 MOSPD2Q8NHP6 518 aa16.04■□□□□ 0.16
CAPN1-203ENST00000525013 PRRC1Q96M27 445 aa16.04■□□□□ 0.16
CAPN1-203ENST00000525013 ZNF347Q96SE7 839 aa16.04■□□□□ 0.16
CAPN1-203ENST00000525013 SH3GL3Q99963 347 aa16.04■□□□□ 0.16
CAPN1-203ENST00000525013 FNDC11Q9BVV2 318 aa16.04■□□□□ 0.16
CAPN1-203ENST00000525013 FAM107BQ9H098 131 aa16.04■□□□□ 0.16
CAPN1-203ENST00000525013 RAB1BQ9H0U4 201 aa16.04■□□□□ 0.16
CAPN1-203ENST00000525013 DYNLRB1Q9NP97 96 aa16.04■□□□□ 0.16
CAPN1-203ENST00000525013 RHCGQ9UBD6 479 aa16.04■□□□□ 0.16
CAPN1-203ENST00000525013 FBXO9Q9UK97 447 aaPredicted RBP16.04■□□□□ 0.16
CAPN1-203ENST00000525013 A4GNTQ9UNA3 340 aa16.04■□□□□ 0.16
CAPN1-203ENST00000525013 CMAHPQ9Y471 501 aa16.04■□□□□ 0.16
CAPN1-203ENST00000525013 SNX13Q9Y5W8 968 aa16.04■□□□□ 0.16
CAPN1-203ENST00000525013 MALRD1Q5VYJ5 2156 aa16.03■□□□□ 0.16
CAPN1-203ENST00000525013 A0A096LNT2 108 aa16.03■□□□□ 0.16
CAPN1-203ENST00000525013 ATP8B1O43520 1251 aa16.03■□□□□ 0.16
CAPN1-203ENST00000525013 CRLF1O75462 422 aa16.03■□□□□ 0.16
CAPN1-203ENST00000525013 IGF2P01344 180 aa16.03■□□□□ 0.16
CAPN1-203ENST00000525013 IFI30P13284 250 aa16.03■□□□□ 0.16
CAPN1-203ENST00000525013 ACADSP16219 412 aa16.03■□□□□ 0.16
CAPN1-203ENST00000525013 LSP1P33241 339 aa16.03■□□□□ 0.16
CAPN1-203ENST00000525013 GSK3BP49841 420 aa16.03■□□□□ 0.16
CAPN1-203ENST00000525013 PPOXP50336 477 aa16.03■□□□□ 0.16
CAPN1-203ENST00000525013 ZNF84P51523 738 aa16.03■□□□□ 0.16
CAPN1-203ENST00000525013 SEC24CP53992 1094 aa16.03■□□□□ 0.16
CAPN1-203ENST00000525013 LOXL1Q08397 574 aaPredicted RBP16.03■□□□□ 0.16
CAPN1-203ENST00000525013 TMEM249Q2WGJ8 235 aa16.03■□□□□ 0.16
CAPN1-203ENST00000525013 GKAP1Q5VSY0 366 aaPredicted RBP16.03■□□□□ 0.16
CAPN1-203ENST00000525013 FKBP9P1Q75LS8 142 aa16.03■□□□□ 0.16
CAPN1-203ENST00000525013 ZCCHC24Q8N2G6 241 aaKnown RBP16.03■□□□□ 0.16
CAPN1-203ENST00000525013 OR4K5Q8NGD3 323 aa16.03■□□□□ 0.16
CAPN1-203ENST00000525013 FGFBP3Q8TAT2 258 aa16.03■□□□□ 0.16
CAPN1-203ENST00000525013 ASB10Q8WXI3 467 aa16.03■□□□□ 0.16
CAPN1-203ENST00000525013 MCHR2Q969V1 340 aa16.03■□□□□ 0.16
CAPN1-203ENST00000525013 BPIFA2Q96DR5 249 aa16.03■□□□□ 0.16
CAPN1-203ENST00000525013 ZNF75AQ96N20 296 aa16.03■□□□□ 0.16
CAPN1-203ENST00000525013 DOK1Q99704 481 aa16.03■□□□□ 0.16
CAPN1-203ENST00000525013 RNF121Q9H920 327 aa16.03■□□□□ 0.16
CAPN1-203ENST00000525013 FBXL3Q9UKT7 428 aa16.03■□□□□ 0.16
CAPN1-203ENST00000525013 ATRQ13535 2644 aa16.02■□□□□ 0.16
CAPN1-203ENST00000525013 TRMUO75648 421 aaKnown RBP16.02■□□□□ 0.16
CAPN1-203ENST00000525013 ERCC1P07992 297 aaPredicted RBP16.02■□□□□ 0.16
CAPN1-203ENST00000525013 ZNF35P13682 527 aa16.02■□□□□ 0.16
CAPN1-203ENST00000525013 USF1P22415 310 aaPredicted RBP16.02■□□□□ 0.16
CAPN1-203ENST00000525013 GGTLC2Q14390 218 aa16.02■□□□□ 0.16
CAPN1-203ENST00000525013 IFI44LQ53G44 452 aa16.02■□□□□ 0.16
CAPN1-203ENST00000525013 TMEM53Q6P2H8 277 aa16.02■□□□□ 0.16
CAPN1-203ENST00000525013 HACD2Q6Y1H2 254 aa16.02■□□□□ 0.16
CAPN1-203ENST00000525013 MEX3DQ86XN8 651 aaKnown RBP16.02■□□□□ 0.16
CAPN1-203ENST00000525013 PRIMA1Q86XR5 153 aa16.02■□□□□ 0.16
CAPN1-203ENST00000525013 CDK20Q8IZL9 346 aa16.02■□□□□ 0.16
CAPN1-203ENST00000525013 NOXO1Q8NFA2 376 aa16.02■□□□□ 0.16
CAPN1-203ENST00000525013 LIPHQ8WWY8 451 aa16.02■□□□□ 0.16
CAPN1-203ENST00000525013 GEMIN6Q8WXD5 167 aaKnown RBP16.02■□□□□ 0.16
CAPN1-203ENST00000525013 FAM162AQ96A26 154 aa16.02■□□□□ 0.16
CAPN1-203ENST00000525013 CMTM5Q96DZ9 223 aa16.02■□□□□ 0.16
CAPN1-203ENST00000525013 KCTD14Q9BQ13 255 aaPredicted RBP16.02■□□□□ 0.16
CAPN1-203ENST00000525013 PIMREGQ9BSJ6 248 aa16.02■□□□□ 0.16
CAPN1-203ENST00000525013 MRPL13Q9BYD1 178 aaKnown RBP16.02■□□□□ 0.16
CAPN1-203ENST00000525013 STX18Q9P2W9 335 aaKnown RBP16.02■□□□□ 0.16
CAPN1-203ENST00000525013 TMEM129A0AVI4 362 aa16.01■□□□□ 0.15
CAPN1-203ENST00000525013 A8MV72 311 aaPredicted RBP16.01■□□□□ 0.15
CAPN1-203ENST00000525013 J3KTA2 159 aa16.01■□□□□ 0.15
CAPN1-203ENST00000525013 NDUFS8O00217 210 aa16.01■□□□□ 0.15
CAPN1-203ENST00000525013 NDUFAB1O14561 156 aa16.01■□□□□ 0.15
CAPN1-203ENST00000525013 SERPINA1P01009 418 aa16.01■□□□□ 0.15
CAPN1-203ENST00000525013 SERPINA5P05154 406 aa16.01■□□□□ 0.15
CAPN1-203ENST00000525013 ADRA2AP08913 450 aa16.01■□□□□ 0.15
CAPN1-203ENST00000525013 SAGP10523 405 aaPredicted RBP16.01■□□□□ 0.15
CAPN1-203ENST00000525013 FUT4P22083 530 aa16.01■□□□□ 0.15
CAPN1-203ENST00000525013 LSM11P83369 360 aaKnown RBP eCLIP16.01■□□□□ 0.15
CAPN1-203ENST00000525013 TOP3AQ13472 1001 aaPredicted RBP16.01■□□□□ 0.15
CAPN1-203ENST00000525013 TRAM2Q15035 370 aa16.01■□□□□ 0.15
CAPN1-203ENST00000525013 HIST3H3Q16695 136 aa16.01■□□□□ 0.15
CAPN1-203ENST00000525013 ALG10Q5BKT4 473 aa16.01■□□□□ 0.15
CAPN1-203ENST00000525013 CBLL1Q75N03 491 aa16.01■□□□□ 0.15
CAPN1-203ENST00000525013 NRMQ8IXM6 262 aa16.01■□□□□ 0.15
CAPN1-203ENST00000525013 OFCC1Q8IZS5 231 aa16.01■□□□□ 0.15
CAPN1-203ENST00000525013 HSH2DQ96JZ2 352 aa16.01■□□□□ 0.15
CAPN1-203ENST00000525013 FOXN4Q96NZ1 517 aa16.01■□□□□ 0.15
CAPN1-203ENST00000525013 MYOZ1Q9NP98 299 aaPredicted RBP16.01■□□□□ 0.15
CAPN1-203ENST00000525013 LOC390937A0A1W2PQ73 354 aa16■□□□□ 0.15
CAPN1-203ENST00000525013 HTR3EA5X5Y0 456 aa16■□□□□ 0.15
CAPN1-203ENST00000525013 CENPBD1B2RD01 187 aa16■□□□□ 0.15
CAPN1-203ENST00000525013 TSPAN19P0C672 248 aa16■□□□□ 0.15
CAPN1-203ENST00000525013 NCK1P16333 377 aa16■□□□□ 0.15
CAPN1-203ENST00000525013 GLRXP35754 106 aa16■□□□□ 0.15
CAPN1-203ENST00000525013 PSME3P61289 254 aa16■□□□□ 0.15
CAPN1-203ENST00000525013 RPS23P62266 143 aaKnown RBP16■□□□□ 0.15
CAPN1-203ENST00000525013 VLDLRP98155 873 aa16■□□□□ 0.15
CAPN1-203ENST00000525013 CD47Q08722 323 aa16■□□□□ 0.15
CAPN1-203ENST00000525013 SLC36A2Q495M3 483 aa16■□□□□ 0.15
CAPN1-203ENST00000525013 ARMC4Q5T2S8 1044 aa16■□□□□ 0.15
CAPN1-203ENST00000525013 C8orf82Q6P1X6 216 aaPredicted RBP16■□□□□ 0.15
CAPN1-203ENST00000525013 ZNF730Q6ZMV8 503 aa16■□□□□ 0.15
CAPN1-203ENST00000525013 SLC16A14Q7RTX9 510 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms