RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 HNRNPCP07910 306 aaKnown RBP eCLIP6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 MRPL3P09001 348 aaKnown RBP6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 CLEC2LP0C7M8 214 aa6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 IL7P13232 177 aa6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 MYF5P13349 255 aa6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 RBMS1P29558 406 aaKnown RBP6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 EIF1P41567 113 aaKnown RBP6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 RPS5P46782 204 aaKnown RBP6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 EVX1P49640 407 aa6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 DAP3P51398 398 aaKnown RBP6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 CCR9P51686 369 aa6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 E2F1Q01094 437 aa6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 ROM1Q03395 351 aa6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 MXD1Q05195 221 aa6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 RASGEF1BQ0VAM2 473 aa6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 TOMM34Q15785 309 aaPredicted RBP6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 ACSM3Q53FZ2 586 aa6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 ZMAT1Q5H9K5 638 aa6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 PHF19Q5T6S3 580 aa6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 FCRLBQ6BAA4 426 aa6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 ZNF544Q6NX49 715 aa6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 SFXN4Q6P4A7 337 aa6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 OPN5Q6U736 354 aa6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 FAM198BQ6UWH4 519 aa6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 FAM131AQ6UXB0 335 aa6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 SSX6Q7RTT6 188 aa6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 PRSS58Q8IYP2 241 aa6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 ZNF248Q8NDW4 579 aa6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 OR6K6Q8NGW6 343 aa6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 GHSRQ92847 366 aa6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 SPACA9Q96E40 222 aaPredicted RBP6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 DIRAS2Q96HU8 199 aa6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 DCLRE1CQ96SD1 692 aaKnown RBP6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 INTS14Q96SY0 518 aa6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 TBX5Q99593 518 aa6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 KCNJ15Q99712 375 aa6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 NEURL2Q9BR09 285 aa6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 PRDM14Q9GZV8 571 aa6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 SLC22A4Q9H015 551 aa6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 TPK1Q9H3S4 243 aa6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 WDR76Q9H967 626 aa6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 RPRD1BQ9NQG5 326 aaKnown RBP6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 SERINC1Q9NRX5 453 aa6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 CYSLTR2Q9NS75 346 aa6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 ALKBH4Q9NXW9 302 aa6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 B3GALT5Q9Y2C3 310 aa6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 ZNF281Q9Y2X9 895 aa6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 WIF1Q9Y5W5 379 aa6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 XIRP2A4UGR9 3374 aa6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 ASXL3Q9C0F0 2248 aa6.03□□□□□ -1.44
CTNNA1-228ENST00000521640 COL27A1Q8IZC6 1860 aaPredicted RBP6.02□□□□□ -1.44
CTNNA1-228ENST00000521640 CABIN1Q9Y6J0 2220 aa6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 SEC16AO15027 2179 aa6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 IGHV1-45A0A0A0MS14 117 aa6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 IGLV1-36A0A0B4J1U3 117 aa6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 A0A0G2JK05 382 aa6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 TRBV2A0A0J9YWF9 115 aa6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 TRBV5-5A0A0J9YX44 114 aa6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 LOC102725191A0A1B0GVB3 256 aa6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 CD8B2A6NJW9 211 aa6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 TMEM212A6NML5 194 aa6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 E9PI62 339 aa6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 PAX4O43316 350 aa6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 PRKNO60260 465 aaPredicted RBP6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 SELENOFO60613 162 aa6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 TMCC2O75069 709 aa6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 ZNF254O75437 659 aa6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 ITGA10O75578 1167 aa6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 UPK3AO75631 287 aa6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 LDOC1O95751 146 aaPredicted RBP6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 PDGFBP01127 241 aaPredicted RBP6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 HRGP04196 525 aa6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 KRT8P05787 483 aa6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 GYPBP06028 91 aa6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 RAB40ALP0C0E4 278 aa6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 ALOX5APP20292 161 aa6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 RAB3BP20337 219 aa6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 NPR2P20594 1047 aa6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 GTF2E2P29084 291 aaKnown RBP6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 GRPRP30550 384 aa6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 THBS2P35442 1172 aa6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 TALDO1P37837 337 aa6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 PTGDSP41222 190 aa6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 NAA10P41227 235 aaPredicted RBP6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 PSMD7P51665 324 aa6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 ZNF41P51814 821 aaPredicted RBP6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 RPS11P62280 158 aaKnown RBP eCLIP6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 SLC3A1Q07837 685 aa6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 PUDPQ08623 228 aa6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 ALKBH1Q13686 389 aaKnown RBP6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 PCOLCEQ15113 449 aa6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 ACKR1Q16570 336 aa6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 PCK2Q16822 640 aa6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 PLPPR5Q32ZL2 321 aa6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 TP53I3Q53FA7 332 aa6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 TEX30Q5JUR7 227 aa6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 PYHIN1Q6K0P9 492 aa6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 C3orf33Q6P1S2 294 aa6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 CNIH2Q6PI25 160 aa6.02□□□□□ -1.45
CTNNA1-228ENST00000521640 DEGS2Q6QHC5 323 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms