RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 ULBP2Q9BZM5 246 aa7.4□□□□□ -1.22
PABPC1-213ENST00000519848 PCDHAC1Q9H158 963 aa7.4□□□□□ -1.22
PABPC1-213ENST00000519848 RAD21L1Q9H4I0 556 aa7.4□□□□□ -1.22
PABPC1-213ENST00000519848 TMEM38BQ9NVV0 291 aa7.4□□□□□ -1.22
PABPC1-213ENST00000519848 ZNF232Q9UNY5 417 aa7.4□□□□□ -1.22
PABPC1-213ENST00000519848 SNX13Q9Y5W8 968 aa7.4□□□□□ -1.22
PABPC1-213ENST00000519848 ARHGAP32A7KAX9 2087 aa7.4□□□□□ -1.23
PABPC1-213ENST00000519848 LOC390937A0A1W2PQ73 354 aa7.39□□□□□ -1.23
PABPC1-213ENST00000519848 MGRN1O60291 552 aa7.39□□□□□ -1.23
PABPC1-213ENST00000519848 TGDSO95455 350 aa7.39□□□□□ -1.23
PABPC1-213ENST00000519848 F13BP05160 661 aa7.39□□□□□ -1.23
PABPC1-213ENST00000519848 MMP7P09237 267 aaPredicted RBP7.39□□□□□ -1.23
PABPC1-213ENST00000519848 CSF3P09919 207 aa7.39□□□□□ -1.23
PABPC1-213ENST00000519848 TSPAN19P0C672 248 aa7.39□□□□□ -1.23
PABPC1-213ENST00000519848 NAT2P11245 290 aa7.39□□□□□ -1.23
PABPC1-213ENST00000519848 NQO1P15559 274 aaKnown RBP7.39□□□□□ -1.23
PABPC1-213ENST00000519848 H2AFXP16104 143 aaPredicted RBP7.39□□□□□ -1.23
PABPC1-213ENST00000519848 ANOS1P23352 680 aa7.39□□□□□ -1.23
PABPC1-213ENST00000519848 CDAP32320 146 aa7.39□□□□□ -1.23
PABPC1-213ENST00000519848 WNT5AP41221 380 aa7.39□□□□□ -1.23
PABPC1-213ENST00000519848 CAPZA2P47755 286 aa7.39□□□□□ -1.23
PABPC1-213ENST00000519848 CDH15P55291 814 aa7.39□□□□□ -1.23
PABPC1-213ENST00000519848 STX1BP61266 288 aa7.39□□□□□ -1.23
PABPC1-213ENST00000519848 IL1RL1Q01638 556 aa7.39□□□□□ -1.23
PABPC1-213ENST00000519848 GLO1Q04760 184 aa7.39□□□□□ -1.23
PABPC1-213ENST00000519848 CHRNB3Q05901 458 aa7.39□□□□□ -1.23
PABPC1-213ENST00000519848 RPL18Q07020 188 aaKnown RBP7.39□□□□□ -1.23
PABPC1-213ENST00000519848 PMS2P3Q13401 168 aa7.39□□□□□ -1.23
PABPC1-213ENST00000519848 DAG1Q14118 895 aa7.39□□□□□ -1.23
PABPC1-213ENST00000519848 HIST3H3Q16695 136 aa7.39□□□□□ -1.23
PABPC1-213ENST00000519848 GSG1Q2KHT4 349 aa7.39□□□□□ -1.23
PABPC1-213ENST00000519848 PODNL1Q6PEZ8 512 aa7.39□□□□□ -1.23
PABPC1-213ENST00000519848 SLC35D2Q76EJ3 337 aa7.39□□□□□ -1.23
PABPC1-213ENST00000519848 ABHD12BQ7Z5M8 362 aaPredicted RBP7.39□□□□□ -1.23
PABPC1-213ENST00000519848 SYT9Q86SS6 491 aa7.39□□□□□ -1.23
PABPC1-213ENST00000519848 ZNF101Q8IZC7 436 aa7.39□□□□□ -1.23
PABPC1-213ENST00000519848 ZNF786Q8N393 782 aa7.39□□□□□ -1.23
PABPC1-213ENST00000519848 SCAIQ8N9R8 606 aa7.39□□□□□ -1.23
PABPC1-213ENST00000519848 RBM15BQ8NDT2 890 aaKnown RBP7.39□□□□□ -1.23
PABPC1-213ENST00000519848 CPEB3Q8NE35 698 aaKnown RBP7.39□□□□□ -1.23
PABPC1-213ENST00000519848 OR5J2Q8NH18 312 aa7.39□□□□□ -1.23
PABPC1-213ENST00000519848 DNAJA4Q8WW22 397 aaPredicted RBP7.39□□□□□ -1.23
PABPC1-213ENST00000519848 HDAC2Q92769 488 aaKnown RBP7.39□□□□□ -1.23
PABPC1-213ENST00000519848 SLC47A1Q96FL8 570 aa7.39□□□□□ -1.23
PABPC1-213ENST00000519848 MRPL13Q9BYD1 178 aaKnown RBP7.39□□□□□ -1.23
PABPC1-213ENST00000519848 POFUT1Q9H488 388 aa7.39□□□□□ -1.23
PABPC1-213ENST00000519848 MAN2C1Q9NTJ4 1040 aa7.39□□□□□ -1.23
PABPC1-213ENST00000519848 ZNF446Q9NWS9 450 aa7.39□□□□□ -1.23
PABPC1-213ENST00000519848 THUMPD1Q9NXG2 353 aaKnown RBP7.39□□□□□ -1.23
PABPC1-213ENST00000519848 RPS6KB2Q9UBS0 482 aa7.39□□□□□ -1.23
PABPC1-213ENST00000519848 CDC42EP3Q9UKI2 254 aa7.39□□□□□ -1.23
PABPC1-213ENST00000519848 ANGPT4Q9Y264 503 aa7.39□□□□□ -1.23
PABPC1-213ENST00000519848 ADARB2-AS1A8MUL3 147 aa7.38□□□□□ -1.23
PABPC1-213ENST00000519848 J3KTA2 159 aa7.38□□□□□ -1.23
PABPC1-213ENST00000519848 FFAR1O14842 300 aa7.38□□□□□ -1.23
PABPC1-213ENST00000519848 OR2T1O43869 369 aa7.38□□□□□ -1.23
PABPC1-213ENST00000519848 RGS9O75916 674 aaPredicted RBP7.38□□□□□ -1.23
PABPC1-213ENST00000519848 VENTXO95231 258 aa7.38□□□□□ -1.23
PABPC1-213ENST00000519848 TGFAP01135 160 aa7.38□□□□□ -1.23
PABPC1-213ENST00000519848 ADORA3P0DMS8 318 aa7.38□□□□□ -1.23
PABPC1-213ENST00000519848 ITGA2P17301 1181 aa7.38□□□□□ -1.23
PABPC1-213ENST00000519848 AHCYP23526 432 aa7.38□□□□□ -1.23
PABPC1-213ENST00000519848 SLC6A2P23975 617 aa7.38□□□□□ -1.23
PABPC1-213ENST00000519848 APEX1P27695 318 aaKnown RBP7.38□□□□□ -1.23
PABPC1-213ENST00000519848 GTF2E2P29084 291 aaKnown RBP7.38□□□□□ -1.23
PABPC1-213ENST00000519848 ARR3P36575 388 aa7.38□□□□□ -1.23
PABPC1-213ENST00000519848 MPV17P39210 176 aa7.38□□□□□ -1.23
PABPC1-213ENST00000519848 AQP2P41181 271 aa7.38□□□□□ -1.23
PABPC1-213ENST00000519848 OR1E2P47887 323 aa7.38□□□□□ -1.23
PABPC1-213ENST00000519848 CSNK1A1P48729 337 aa7.38□□□□□ -1.23
PABPC1-213ENST00000519848 GZMKP49863 264 aa7.38□□□□□ -1.23
PABPC1-213ENST00000519848 LMO4P61968 165 aa7.38□□□□□ -1.23
PABPC1-213ENST00000519848 PIN1Q13526 163 aaPredicted RBP7.38□□□□□ -1.23
PABPC1-213ENST00000519848 NFYCQ13952 458 aa7.38□□□□□ -1.23
PABPC1-213ENST00000519848 CYP51A1Q16850 503 aa7.38□□□□□ -1.23
PABPC1-213ENST00000519848 VMACQ2NL98 169 aa7.38□□□□□ -1.23
PABPC1-213ENST00000519848 ARMC4Q5T2S8 1044 aa7.38□□□□□ -1.23
PABPC1-213ENST00000519848 REP15Q6BDI9 236 aa7.38□□□□□ -1.23
PABPC1-213ENST00000519848 FAM166AQ6J272 317 aa7.38□□□□□ -1.23
PABPC1-213ENST00000519848 NANOGP8Q6NSW7 305 aa7.38□□□□□ -1.23
PABPC1-213ENST00000519848 ZNF613Q6PF04 617 aa7.38□□□□□ -1.23
PABPC1-213ENST00000519848 SHISA2Q6UWI4 295 aa7.38□□□□□ -1.23
PABPC1-213ENST00000519848 RFPL4BQ6ZWI9 263 aa7.38□□□□□ -1.23
PABPC1-213ENST00000519848 PXKQ7Z7A4 578 aa7.38□□□□□ -1.23
PABPC1-213ENST00000519848 CROCCP2Q86T23 111 aa7.38□□□□□ -1.23
PABPC1-213ENST00000519848 IGFN1Q86VF2 1251 aa7.38□□□□□ -1.23
PABPC1-213ENST00000519848 DEPDC4Q8N2C3 294 aa7.38□□□□□ -1.23
PABPC1-213ENST00000519848 SLC22A24Q8N4F4 322 aa7.38□□□□□ -1.23
PABPC1-213ENST00000519848 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.38□□□□□ -1.23
PABPC1-213ENST00000519848 LRRC75AQ8NAA5 344 aa7.38□□□□□ -1.23
PABPC1-213ENST00000519848 C11orf65Q8NCR3 313 aa7.38□□□□□ -1.23
PABPC1-213ENST00000519848 NOXO1Q8NFA2 376 aa7.38□□□□□ -1.23
PABPC1-213ENST00000519848 SEMA6DQ8NFY4 1073 aa7.38□□□□□ -1.23
PABPC1-213ENST00000519848 OR4K5Q8NGD3 323 aa7.38□□□□□ -1.23
PABPC1-213ENST00000519848 STON2Q8WXE9 905 aa7.38□□□□□ -1.23
PABPC1-213ENST00000519848 ASB10Q8WXI3 467 aa7.38□□□□□ -1.23
PABPC1-213ENST00000519848 LRR1Q96L50 414 aa7.38□□□□□ -1.23
PABPC1-213ENST00000519848 TMEM120AQ9BXJ8 343 aa7.38□□□□□ -1.23
PABPC1-213ENST00000519848 ASPNQ9BXN1 380 aa7.38□□□□□ -1.23
PABPC1-213ENST00000519848 NANOGQ9H9S0 305 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms