RNA–Protein interactions for RNA: ENST00000519664.1

SYNPO-204, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-204ENST00000519664 TIGD3Q6B0B8 471 aa10.72□□□□□ -0.69
SYNPO-204ENST00000519664 CHRDL2Q6WN34 429 aa10.72□□□□□ -0.69
SYNPO-204ENST00000519664 OR4D11Q8NGI4 311 aa10.72□□□□□ -0.69
SYNPO-204ENST00000519664 RAB40AQ8WXH6 277 aa10.72□□□□□ -0.69
SYNPO-204ENST00000519664 HSD17B8Q92506 261 aa10.72□□□□□ -0.69
SYNPO-204ENST00000519664 ELSPBP1Q96BH3 223 aa10.72□□□□□ -0.69
SYNPO-204ENST00000519664 DCLRE1CQ96SD1 692 aaKnown RBP10.72□□□□□ -0.69
SYNPO-204ENST00000519664 SCPEP1Q9HB40 452 aa10.72□□□□□ -0.69
SYNPO-204ENST00000519664 GPATCH2Q9NW75 528 aa10.72□□□□□ -0.69
SYNPO-204ENST00000519664 OBP2AQ9NY56 170 aa10.72□□□□□ -0.69
SYNPO-204ENST00000519664 SUSD2Q9UGT4 822 aa10.72□□□□□ -0.69
SYNPO-204ENST00000519664 ATAD5Q96QE3 1844 aa10.72□□□□□ -0.69
SYNPO-204ENST00000519664 PAPPA2Q9BXP8 1791 aa10.72□□□□□ -0.69
SYNPO-204ENST00000519664 ZNF638Q14966 1978 aaKnown RBP10.72□□□□□ -0.69
SYNPO-204ENST00000519664 MED12Q93074 2177 aa10.72□□□□□ -0.69
SYNPO-204ENST00000519664 TLCD2A6NGC4 264 aa10.72□□□□□ -0.69
SYNPO-204ENST00000519664 SLC43A1O75387 559 aa10.72□□□□□ -0.69
SYNPO-204ENST00000519664 ZFAND5O76080 213 aa10.72□□□□□ -0.69
SYNPO-204ENST00000519664 AKR7A3O95154 331 aa10.72□□□□□ -0.69
SYNPO-204ENST00000519664 EIF4EP06730 217 aaKnown RBP10.72□□□□□ -0.69
SYNPO-204ENST00000519664 DBHP09172 617 aa10.72□□□□□ -0.69
SYNPO-204ENST00000519664 AGTR1P30556 359 aa10.72□□□□□ -0.69
SYNPO-204ENST00000519664 GPLD1P80108 840 aa10.72□□□□□ -0.69
SYNPO-204ENST00000519664 PDSS1Q5T2R2 415 aa10.72□□□□□ -0.69
SYNPO-204ENST00000519664 ZNF100Q8IYN0 542 aa10.72□□□□□ -0.69
SYNPO-204ENST00000519664 BCORP1Q8N888 145 aa10.72□□□□□ -0.69
SYNPO-204ENST00000519664 OR6F1Q8NGZ6 308 aa10.72□□□□□ -0.69
SYNPO-204ENST00000519664 FGGYQ96C11 551 aa10.72□□□□□ -0.69
SYNPO-204ENST00000519664 SLC46A1Q96NT5 459 aa10.72□□□□□ -0.69
SYNPO-204ENST00000519664 C19orf43Q9BQ61 176 aa10.72□□□□□ -0.69
SYNPO-204ENST00000519664 NAA11Q9BSU3 229 aaPredicted RBP10.72□□□□□ -0.69
SYNPO-204ENST00000519664 KIF13BQ9NQT8 1826 aa10.72□□□□□ -0.69
SYNPO-204ENST00000519664 A6NIZ1 184 aa10.72□□□□□ -0.69
SYNPO-204ENST00000519664 PAPLNO95428 1278 aa10.72□□□□□ -0.69
SYNPO-204ENST00000519664 THBS1P07996 1170 aa10.72□□□□□ -0.69
SYNPO-204ENST00000519664 CSNK1A1P48729 337 aa10.72□□□□□ -0.69
SYNPO-204ENST00000519664 RAP1BP61224 184 aa10.72□□□□□ -0.69
SYNPO-204ENST00000519664 RAP1AP62834 184 aa10.72□□□□□ -0.69
SYNPO-204ENST00000519664 RPS15P62841 145 aaKnown RBP10.72□□□□□ -0.69
SYNPO-204ENST00000519664 CLCC1Q96S66 551 aa10.72□□□□□ -0.69
SYNPO-204ENST00000519664 STACQ99469 402 aa10.72□□□□□ -0.69
SYNPO-204ENST00000519664 DDOQ99489 341 aa10.72□□□□□ -0.69
SYNPO-204ENST00000519664 NARFLQ9H6Q4 476 aa10.72□□□□□ -0.69
SYNPO-204ENST00000519664 SLC17A4Q9Y2C5 497 aa10.72□□□□□ -0.69
SYNPO-204ENST00000519664 PRAF2O60831 178 aa10.71□□□□□ -0.69
SYNPO-204ENST00000519664 GLCEO94923 617 aa10.71□□□□□ -0.69
SYNPO-204ENST00000519664 SYNGR4O95473 234 aa10.71□□□□□ -0.69
SYNPO-204ENST00000519664 FOSL2P15408 326 aa10.71□□□□□ -0.69
SYNPO-204ENST00000519664 HTR2CP28335 458 aa10.71□□□□□ -0.69
SYNPO-204ENST00000519664 DLSTP36957 453 aa10.71□□□□□ -0.69
SYNPO-204ENST00000519664 KIAA1024LP59773 190 aa10.71□□□□□ -0.69
SYNPO-204ENST00000519664 MPEG1Q2M385 716 aa10.71□□□□□ -0.69
SYNPO-204ENST00000519664 UBE2NLQ5JXB2 153 aa10.71□□□□□ -0.69
SYNPO-204ENST00000519664 CA13Q8N1Q1 262 aa10.71□□□□□ -0.69
SYNPO-204ENST00000519664 RHBDD1Q8TEB9 315 aa10.71□□□□□ -0.69
SYNPO-204ENST00000519664 GSX2Q9BZM3 304 aa10.71□□□□□ -0.69
SYNPO-204ENST00000519664 SRRQ9GZT4 340 aa10.71□□□□□ -0.69
SYNPO-204ENST00000519664 EIF5A2Q9GZV4 153 aaKnown RBP10.71□□□□□ -0.69
SYNPO-204ENST00000519664 NPFFR2Q9Y5X5 522 aa10.71□□□□□ -0.69
SYNPO-204ENST00000519664 MIA3Q5JRA6 1907 aa10.71□□□□□ -0.69
SYNPO-204ENST00000519664 TP53P04637 393 aaPredicted RBP10.71□□□□□ -0.69
SYNPO-204ENST00000519664 GLI4P10075 376 aa10.71□□□□□ -0.69
SYNPO-204ENST00000519664 KIR2DL3P43628 341 aa10.71□□□□□ -0.69
SYNPO-204ENST00000519664 LYSMD4Q5XG99 296 aa10.71□□□□□ -0.69
SYNPO-204ENST00000519664 KANSL1Q7Z3B3 1105 aa10.71□□□□□ -0.69
SYNPO-204ENST00000519664 DCXRQ7Z4W1 244 aa10.71□□□□□ -0.69
SYNPO-204ENST00000519664 BATF2Q8N1L9 274 aa10.71□□□□□ -0.69
SYNPO-204ENST00000519664 ZSCAN1Q8NBB4 408 aa10.71□□□□□ -0.69
SYNPO-204ENST00000519664 ZBTB44Q8NCP5 570 aa10.71□□□□□ -0.69
SYNPO-204ENST00000519664 TMEM185AQ8NFB2 350 aa10.71□□□□□ -0.69
SYNPO-204ENST00000519664 GPR119Q8TDV5 335 aa10.71□□□□□ -0.69
SYNPO-204ENST00000519664 CDC6Q99741 560 aa10.71□□□□□ -0.69
SYNPO-204ENST00000519664 SLC22A13Q9Y226 551 aa10.71□□□□□ -0.69
SYNPO-204ENST00000519664 UBE2J1Q9Y385 318 aaPredicted RBP10.71□□□□□ -0.69
SYNPO-204ENST00000519664 GREB1LQ9C091 1923 aaPredicted RBP10.71□□□□□ -0.7
SYNPO-204ENST00000519664 DSCR3O14972 297 aa10.71□□□□□ -0.7
SYNPO-204ENST00000519664 PLRG1O43660 514 aaKnown RBP10.71□□□□□ -0.7
SYNPO-204ENST00000519664 LIMS3P0CW19 117 aa10.71□□□□□ -0.7
SYNPO-204ENST00000519664 LIMS4P0CW20 117 aa10.71□□□□□ -0.7
SYNPO-204ENST00000519664 RGS19P49795 217 aa10.71□□□□□ -0.7
SYNPO-204ENST00000519664 MC2RQ01718 297 aa10.71□□□□□ -0.7
SYNPO-204ENST00000519664 TNK1Q13470 666 aa10.71□□□□□ -0.7
SYNPO-204ENST00000519664 TDGQ13569 410 aa10.71□□□□□ -0.7
SYNPO-204ENST00000519664 SLC36A2Q495M3 483 aa10.71□□□□□ -0.7
SYNPO-204ENST00000519664 MEX3BQ6ZN04 569 aaKnown RBP10.71□□□□□ -0.7
SYNPO-204ENST00000519664 MFSD4AQ8N468 514 aa10.71□□□□□ -0.7
SYNPO-204ENST00000519664 FAM3DQ96BQ1 224 aa10.71□□□□□ -0.7
SYNPO-204ENST00000519664 SIRT3Q9NTG7 399 aaPredicted RBP10.71□□□□□ -0.7
SYNPO-204ENST00000519664 KCNS2Q9ULS6 477 aa10.71□□□□□ -0.7
SYNPO-204ENST00000519664 MMP17Q9ULZ9 603 aa10.71□□□□□ -0.7
SYNPO-204ENST00000519664 CAMK2AQ9UQM7 478 aa10.71□□□□□ -0.7
SYNPO-204ENST00000519664 GPR179Q6PRD1 2367 aa10.71□□□□□ -0.7
SYNPO-204ENST00000519664 TMEM212A6NML5 194 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 CDC42EP2O14613 210 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 GAAP10253 952 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 IFNGR1P15260 489 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 ZFP36L2P47974 494 aaKnown RBP10.7□□□□□ -0.7
SYNPO-204ENST00000519664 DUSP3P51452 185 aaPredicted RBP10.7□□□□□ -0.7
SYNPO-204ENST00000519664 HSD17B7P56937 341 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 S100A12P80511 92 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms