RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-208ENST00000511001 RAB1AP62820 205 aa10.4□□□□□ -0.74
CHFR-208ENST00000511001 SELENOWP63302 87 aa10.4□□□□□ -0.74
CHFR-208ENST00000511001 LSM11P83369 360 aaKnown RBP eCLIP10.4□□□□□ -0.74
CHFR-208ENST00000511001 SNTB2Q13425 540 aaKnown RBP10.4□□□□□ -0.74
CHFR-208ENST00000511001 DAG1Q14118 895 aa10.4□□□□□ -0.74
CHFR-208ENST00000511001 HIST3H3Q16695 136 aa10.4□□□□□ -0.74
CHFR-208ENST00000511001 TMEM249Q2WGJ8 235 aa10.4□□□□□ -0.74
CHFR-208ENST00000511001 KRT80Q6KB66 452 aa10.4□□□□□ -0.74
CHFR-208ENST00000511001 PIWIL3Q7Z3Z3 882 aaKnown RBP10.4□□□□□ -0.74
CHFR-208ENST00000511001 VTCN1Q7Z7D3 282 aa10.4□□□□□ -0.74
CHFR-208ENST00000511001 ZNF584Q8IVC4 421 aa10.4□□□□□ -0.74
CHFR-208ENST00000511001 SLC22A24Q8N4F4 322 aa10.4□□□□□ -0.74
CHFR-208ENST00000511001 MOSPD2Q8NHP6 518 aa10.4□□□□□ -0.74
CHFR-208ENST00000511001 ASB10Q8WXI3 467 aa10.4□□□□□ -0.74
CHFR-208ENST00000511001 ZNF566Q969W8 418 aa10.4□□□□□ -0.74
CHFR-208ENST00000511001 TPD52L3Q96J77 140 aa10.4□□□□□ -0.74
CHFR-208ENST00000511001 PRRC1Q96M27 445 aa10.4□□□□□ -0.74
CHFR-208ENST00000511001 TNFRSF13CQ96RJ3 184 aa10.4□□□□□ -0.74
CHFR-208ENST00000511001 ZNF347Q96SE7 839 aa10.4□□□□□ -0.74
CHFR-208ENST00000511001 SEPHS2Q99611 448 aa10.4□□□□□ -0.74
CHFR-208ENST00000511001 VRK1Q99986 396 aaPredicted RBP10.4□□□□□ -0.74
CHFR-208ENST00000511001 AP3M1Q9Y2T2 418 aa10.4□□□□□ -0.74
CHFR-208ENST00000511001 SNX13Q9Y5W8 968 aa10.4□□□□□ -0.74
CHFR-208ENST00000511001 J3KTA2 159 aa10.39□□□□□ -0.75
CHFR-208ENST00000511001 TRMUO75648 421 aaKnown RBP10.39□□□□□ -0.75
CHFR-208ENST00000511001 UBL3O95164 117 aa10.39□□□□□ -0.75
CHFR-208ENST00000511001 IGHG1P01857 330 aa10.39□□□□□ -0.75
CHFR-208ENST00000511001 TP53P04637 393 aaPredicted RBP10.39□□□□□ -0.75
CHFR-208ENST00000511001 QDPRP09417 244 aa10.39□□□□□ -0.75
CHFR-208ENST00000511001 PTDSS1P48651 473 aaKnown RBP10.39□□□□□ -0.75
CHFR-208ENST00000511001 GSK3BP49841 420 aa10.39□□□□□ -0.75
CHFR-208ENST00000511001 PDLIM4P50479 330 aa10.39□□□□□ -0.75
CHFR-208ENST00000511001 SLC7A2P52569 658 aa10.39□□□□□ -0.75
CHFR-208ENST00000511001 ZNF133P52736 654 aaPredicted RBP10.39□□□□□ -0.75
CHFR-208ENST00000511001 VLDLRP98155 873 aa10.39□□□□□ -0.75
CHFR-208ENST00000511001 MYBPC1Q00872 1141 aa10.39□□□□□ -0.75
CHFR-208ENST00000511001 LIPEQ05469 1076 aa10.39□□□□□ -0.75
CHFR-208ENST00000511001 RAB39AQ14964 217 aa10.39□□□□□ -0.75
CHFR-208ENST00000511001 GKAP1Q5VSY0 366 aaPredicted RBP10.39□□□□□ -0.75
CHFR-208ENST00000511001 HACD2Q6Y1H2 254 aa10.39□□□□□ -0.75
CHFR-208ENST00000511001 CBLL1Q75N03 491 aa10.39□□□□□ -0.75
CHFR-208ENST00000511001 SPATA21Q7Z572 469 aa10.39□□□□□ -0.75
CHFR-208ENST00000511001 ARPINQ7Z6K5 226 aa10.39□□□□□ -0.75
CHFR-208ENST00000511001 CDK20Q8IZL9 346 aa10.39□□□□□ -0.75
CHFR-208ENST00000511001 ZCCHC24Q8N2G6 241 aaKnown RBP10.39□□□□□ -0.75
CHFR-208ENST00000511001 SVOPLQ8N434 492 aa10.39□□□□□ -0.75
CHFR-208ENST00000511001 SPATA3Q8NHX4 192 aa10.39□□□□□ -0.75
CHFR-208ENST00000511001 MCHR2Q969V1 340 aa10.39□□□□□ -0.75
CHFR-208ENST00000511001 NMD3Q96D46 503 aaKnown RBP10.39□□□□□ -0.75
CHFR-208ENST00000511001 MYLK2Q9H1R3 596 aa10.39□□□□□ -0.75
CHFR-208ENST00000511001 DENND2DQ9H6A0 471 aaPredicted RBP10.39□□□□□ -0.75
CHFR-208ENST00000511001 YAE1D1Q9NRH1 226 aa10.39□□□□□ -0.75
CHFR-208ENST00000511001 INIPQ9NRY2 104 aa10.39□□□□□ -0.75
CHFR-208ENST00000511001 MAN2C1Q9NTJ4 1040 aa10.39□□□□□ -0.75
CHFR-208ENST00000511001 MED31Q9Y3C7 131 aa10.39□□□□□ -0.75
CHFR-208ENST00000511001 FKBP7Q9Y680 259 aa10.39□□□□□ -0.75
CHFR-208ENST00000511001 FBN1P35555 2871 aaKnown RBP10.38□□□□□ -0.75
CHFR-208ENST00000511001 IGKV1D-43A0A0B4J1Z2 117 aa10.38□□□□□ -0.75
CHFR-208ENST00000511001 A0A1W2PRG6 482 aa10.38□□□□□ -0.75
CHFR-208ENST00000511001 CENPBD1B2RD01 187 aa10.38□□□□□ -0.75
CHFR-208ENST00000511001 CXCR6O00574 342 aa10.38□□□□□ -0.75
CHFR-208ENST00000511001 FFAR1O14842 300 aa10.38□□□□□ -0.75
CHFR-208ENST00000511001 CCDC22O60826 627 aa10.38□□□□□ -0.75
CHFR-208ENST00000511001 PRSS23O95084 383 aa10.38□□□□□ -0.75
CHFR-208ENST00000511001 OR8G3PP0DMU2 310 aa10.38□□□□□ -0.75
CHFR-208ENST00000511001 ACADSP16219 412 aa10.38□□□□□ -0.75
CHFR-208ENST00000511001 YAP1P46937 504 aaKnown RBP10.38□□□□□ -0.75
CHFR-208ENST00000511001 ST3GAL3Q11203 375 aa10.38□□□□□ -0.75
CHFR-208ENST00000511001 FHL1Q13642 323 aa10.38□□□□□ -0.75
CHFR-208ENST00000511001 LAPTM4AQ15012 233 aa10.38□□□□□ -0.75
CHFR-208ENST00000511001 FXNQ16595 210 aa10.38□□□□□ -0.75
CHFR-208ENST00000511001 ARMC4Q5T2S8 1044 aa10.38□□□□□ -0.75
CHFR-208ENST00000511001 C6orf52Q5T4I8 152 aa10.38□□□□□ -0.75
CHFR-208ENST00000511001 TSEN54Q7Z6J9 526 aaKnown RBP10.38□□□□□ -0.75
CHFR-208ENST00000511001 OFCC1Q8IZS5 231 aa10.38□□□□□ -0.75
CHFR-208ENST00000511001 LRRC75AQ8NAA5 344 aa10.38□□□□□ -0.75
CHFR-208ENST00000511001 NOXO1Q8NFA2 376 aa10.38□□□□□ -0.75
CHFR-208ENST00000511001 HDAC2Q92769 488 aaKnown RBP10.38□□□□□ -0.75
CHFR-208ENST00000511001 MRPL24Q96A35 216 aaKnown RBP10.38□□□□□ -0.75
CHFR-208ENST00000511001 FOXN4Q96NZ1 517 aa10.38□□□□□ -0.75
CHFR-208ENST00000511001 SH3GL3Q99963 347 aa10.38□□□□□ -0.75
CHFR-208ENST00000511001 HOPXQ9BPY8 73 aaPredicted RBP10.38□□□□□ -0.75
CHFR-208ENST00000511001 MRPL37Q9BZE1 423 aaKnown RBP10.38□□□□□ -0.75
CHFR-208ENST00000511001 NSRP1Q9H0G5 558 aaKnown RBP10.38□□□□□ -0.75
CHFR-208ENST00000511001 ABCD2Q9UBJ2 740 aa10.38□□□□□ -0.75
CHFR-208ENST00000511001 HIF3AQ9Y2N7 669 aa10.38□□□□□ -0.75
CHFR-208ENST00000511001 CUBNO60494 3623 aa10.38□□□□□ -0.75
CHFR-208ENST00000511001 NPIPB13A6NJU9 1138 aa10.37□□□□□ -0.75
CHFR-208ENST00000511001 NPIPB4C9JG80 1138 aa10.37□□□□□ -0.75
CHFR-208ENST00000511001 NDUFS8O00217 210 aa10.37□□□□□ -0.75
CHFR-208ENST00000511001 RAB36O95755 333 aa10.37□□□□□ -0.75
CHFR-208ENST00000511001 SERPINA5P05154 406 aa10.37□□□□□ -0.75
CHFR-208ENST00000511001 IGHV4-31P0DP07 118 aa10.37□□□□□ -0.75
CHFR-208ENST00000511001 IFI30P13284 250 aa10.37□□□□□ -0.75
CHFR-208ENST00000511001 MAKP20794 623 aa10.37□□□□□ -0.75
CHFR-208ENST00000511001 DRD4P21917 467 aa10.37□□□□□ -0.75
CHFR-208ENST00000511001 USF1P22415 310 aaPredicted RBP10.37□□□□□ -0.75
CHFR-208ENST00000511001 GLRXP35754 106 aa10.37□□□□□ -0.75
CHFR-208ENST00000511001 NR4A2P43354 598 aa10.37□□□□□ -0.75
CHFR-208ENST00000511001 SEC24CP53992 1094 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms