RNA–Protein interactions for RNA: ENST00000509748.1

LIN54-208, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 5

Gene LIN54, Length 729 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-208ENST00000509748 PIP5K1CO60331 668 aa18.3■□□□□ 0.52
LIN54-208ENST00000509748 UBL3O95164 117 aa18.3■□□□□ 0.52
LIN54-208ENST00000509748 PDLIM4P50479 330 aa18.3■□□□□ 0.52
LIN54-208ENST00000509748 ZNF133P52736 654 aaPredicted RBP18.3■□□□□ 0.52
LIN54-208ENST00000509748 RAB39AQ14964 217 aa18.3■□□□□ 0.52
LIN54-208ENST00000509748 LAPTM4AQ15012 233 aa18.3■□□□□ 0.52
LIN54-208ENST00000509748 ARMC4Q5T2S8 1044 aa18.3■□□□□ 0.52
LIN54-208ENST00000509748 SPATA21Q7Z572 469 aa18.3■□□□□ 0.52
LIN54-208ENST00000509748 ARPINQ7Z6K5 226 aa18.3■□□□□ 0.52
LIN54-208ENST00000509748 VTCN1Q7Z7D3 282 aa18.3■□□□□ 0.52
LIN54-208ENST00000509748 CDK20Q8IZL9 346 aa18.3■□□□□ 0.52
LIN54-208ENST00000509748 ZCCHC24Q8N2G6 241 aaKnown RBP18.3■□□□□ 0.52
LIN54-208ENST00000509748 MCHR2Q969V1 340 aa18.3■□□□□ 0.52
LIN54-208ENST00000509748 FOXN4Q96NZ1 517 aa18.3■□□□□ 0.52
LIN54-208ENST00000509748 ZNF347Q96SE7 839 aa18.3■□□□□ 0.52
LIN54-208ENST00000509748 SH3GL3Q99963 347 aa18.3■□□□□ 0.52
LIN54-208ENST00000509748 MAN2C1Q9NTJ4 1040 aa18.3■□□□□ 0.52
LIN54-208ENST00000509748 MED31Q9Y3C7 131 aa18.3■□□□□ 0.52
LIN54-208ENST00000509748 VSTM5A8MXK1 200 aa18.29■□□□□ 0.52
LIN54-208ENST00000509748 FFAR1O14842 300 aa18.29■□□□□ 0.52
LIN54-208ENST00000509748 CCDC22O60826 627 aa18.29■□□□□ 0.52
LIN54-208ENST00000509748 TRMUO75648 421 aaKnown RBP18.29■□□□□ 0.52
LIN54-208ENST00000509748 IGHG1P01857 330 aa18.29■□□□□ 0.52
LIN54-208ENST00000509748 OR8G3PP0DMU2 310 aa18.29■□□□□ 0.52
LIN54-208ENST00000509748 USF1P22415 310 aaPredicted RBP18.29■□□□□ 0.52
LIN54-208ENST00000509748 FXNQ16595 210 aa18.29■□□□□ 0.52
LIN54-208ENST00000509748 C6orf52Q5T4I8 152 aa18.29■□□□□ 0.52
LIN54-208ENST00000509748 HIPK1Q86Z02 1210 aa18.29■□□□□ 0.52
LIN54-208ENST00000509748 NMD3Q96D46 503 aaKnown RBP18.29■□□□□ 0.52
LIN54-208ENST00000509748 PRRC1Q96M27 445 aa18.29■□□□□ 0.52
LIN54-208ENST00000509748 INIPQ9NRY2 104 aa18.29■□□□□ 0.52
LIN54-208ENST00000509748 FBXO9Q9UK97 447 aaPredicted RBP18.29■□□□□ 0.52
LIN54-208ENST00000509748 A0A1W2PRG6 482 aa18.28■□□□□ 0.52
LIN54-208ENST00000509748 A8MV72 311 aaPredicted RBP18.28■□□□□ 0.52
LIN54-208ENST00000509748 CENPBD1B2RD01 187 aa18.28■□□□□ 0.52
LIN54-208ENST00000509748 NDUFS8O00217 210 aa18.28■□□□□ 0.52
LIN54-208ENST00000509748 RAB36O95755 333 aa18.28■□□□□ 0.52
LIN54-208ENST00000509748 SERPINA5P05154 406 aa18.28■□□□□ 0.52
LIN54-208ENST00000509748 IGHV4-31P0DP07 118 aa18.28■□□□□ 0.52
LIN54-208ENST00000509748 ACADSP16219 412 aa18.28■□□□□ 0.52
LIN54-208ENST00000509748 GLRXP35754 106 aa18.28■□□□□ 0.52
LIN54-208ENST00000509748 NR4A2P43354 598 aa18.28■□□□□ 0.52
LIN54-208ENST00000509748 SLC7A2P52569 658 aa18.28■□□□□ 0.52
LIN54-208ENST00000509748 MYBPC1Q00872 1141 aa18.28■□□□□ 0.52
LIN54-208ENST00000509748 ST3GAL3Q11203 375 aa18.28■□□□□ 0.52
LIN54-208ENST00000509748 HACD2Q6Y1H2 254 aa18.28■□□□□ 0.52
LIN54-208ENST00000509748 SYT14Q8NB59 555 aa18.28■□□□□ 0.52
LIN54-208ENST00000509748 NOXO1Q8NFA2 376 aa18.28■□□□□ 0.52
LIN54-208ENST00000509748 OR4K5Q8NGD3 323 aa18.28■□□□□ 0.52
LIN54-208ENST00000509748 MRPL24Q96A35 216 aaKnown RBP18.28■□□□□ 0.52
LIN54-208ENST00000509748 MDFIQ99750 246 aa18.28■□□□□ 0.52
LIN54-208ENST00000509748 HOPXQ9BPY8 73 aaPredicted RBP18.28■□□□□ 0.52
LIN54-208ENST00000509748 MRPL37Q9BZE1 423 aaKnown RBP18.28■□□□□ 0.52
LIN54-208ENST00000509748 RAB1BQ9H0U4 201 aa18.28■□□□□ 0.52
LIN54-208ENST00000509748 MYLK2Q9H1R3 596 aa18.28■□□□□ 0.52
LIN54-208ENST00000509748 CMAHPQ9Y471 501 aa18.28■□□□□ 0.52
LIN54-208ENST00000509748 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.28■□□□□ 0.522e-13■■■□□ 15.5
LIN54-208ENST00000509748 LOC390937A0A1W2PQ73 354 aa18.27■□□□□ 0.52
LIN54-208ENST00000509748 NPIPB13A6NJU9 1138 aa18.27■□□□□ 0.52
LIN54-208ENST00000509748 NPIPB4C9JG80 1138 aa18.27■□□□□ 0.52
LIN54-208ENST00000509748 J3KTA2 159 aa18.27■□□□□ 0.52
LIN54-208ENST00000509748 CXCR6O00574 342 aa18.27■□□□□ 0.52
LIN54-208ENST00000509748 YAP1P46937 504 aaKnown RBP18.27■□□□□ 0.52
LIN54-208ENST00000509748 EVX1P49640 407 aa18.27■□□□□ 0.52
LIN54-208ENST00000509748 GSK3BP49841 420 aa18.27■□□□□ 0.52
LIN54-208ENST00000509748 CLRN1P58418 232 aa18.27■□□□□ 0.52
LIN54-208ENST00000509748 FHL1Q13642 323 aa18.27■□□□□ 0.52
LIN54-208ENST00000509748 C10orf128Q5T292 105 aa18.27■□□□□ 0.52
LIN54-208ENST00000509748 CBLL1Q75N03 491 aa18.27■□□□□ 0.52
LIN54-208ENST00000509748 TSEN54Q7Z6J9 526 aaKnown RBP18.27■□□□□ 0.52
LIN54-208ENST00000509748 LZICQ8WZA0 190 aa18.27■□□□□ 0.52
LIN54-208ENST00000509748 EFCAB1Q9HAE3 211 aa18.27■□□□□ 0.52
LIN54-208ENST00000509748 MYOZ1Q9NP98 299 aaPredicted RBP18.27■□□□□ 0.52
LIN54-208ENST00000509748 FBXL3Q9UKT7 428 aa18.27■□□□□ 0.52
LIN54-208ENST00000509748 HIF3AQ9Y2N7 669 aa18.27■□□□□ 0.52
LIN54-208ENST00000509748 CUBNO60494 3623 aa18.27■□□□□ 0.52
LIN54-208ENST00000509748 MXRA5Q9NR99 2828 aa18.27■□□□□ 0.51
LIN54-208ENST00000509748 IGKV1D-43A0A0B4J1Z2 117 aa18.26■□□□□ 0.51
LIN54-208ENST00000509748 IGHV4-61A0A0C4DH41 118 aa18.26■□□□□ 0.51
LIN54-208ENST00000509748 SH3PXD2BA1X283 911 aa18.26■□□□□ 0.51
LIN54-208ENST00000509748 PRSS23O95084 383 aa18.26■□□□□ 0.51
LIN54-208ENST00000509748 MAKP20794 623 aa18.26■□□□□ 0.51
LIN54-208ENST00000509748 DAP3P51398 398 aaKnown RBP18.26■□□□□ 0.51
LIN54-208ENST00000509748 NRN1LQ496H8 165 aa18.26■□□□□ 0.51
LIN54-208ENST00000509748 LRP11Q86VZ4 500 aa18.26■□□□□ 0.51
LIN54-208ENST00000509748 OFCC1Q8IZS5 231 aa18.26■□□□□ 0.51
LIN54-208ENST00000509748 PAQR4Q8N4S7 273 aaPredicted RBP18.26■□□□□ 0.51
LIN54-208ENST00000509748 LRRC75AQ8NAA5 344 aa18.26■□□□□ 0.51
LIN54-208ENST00000509748 NEU4Q8WWR8 484 aaPredicted RBP18.26■□□□□ 0.51
LIN54-208ENST00000509748 HDAC2Q92769 488 aaKnown RBP18.26■□□□□ 0.51
LIN54-208ENST00000509748 BPIFA2Q96DR5 249 aa18.26■□□□□ 0.51
LIN54-208ENST00000509748 PIMREGQ9BSJ6 248 aa18.26■□□□□ 0.51
LIN54-208ENST00000509748 TXNIPQ9H3M7 391 aa18.26■□□□□ 0.51
LIN54-208ENST00000509748 RHCGQ9UBD6 479 aa18.26■□□□□ 0.51
LIN54-208ENST00000509748 SPEF1Q9Y4P9 236 aa18.26■□□□□ 0.51
LIN54-208ENST00000509748 UGT2A1Q9Y4X1 527 aa18.26■□□□□ 0.51
LIN54-208ENST00000509748 HTR3EA5X5Y0 456 aa18.25■□□□□ 0.51
LIN54-208ENST00000509748 MCIDASD6RGH6 385 aa18.25■□□□□ 0.51
LIN54-208ENST00000509748 ATP8B1O43520 1251 aa18.25■□□□□ 0.51
LIN54-208ENST00000509748 STAMBPO95630 424 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms