RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 OR2M3Q8NG83 312 aa13.37□□□□□ -0.27
PHF3-209ENST00000509330 DERL3Q96Q80 235 aa13.37□□□□□ -0.27
PHF3-209ENST00000509330 NEURL2Q9BR09 285 aa13.37□□□□□ -0.27
PHF3-209ENST00000509330 MMP28Q9H239 520 aa13.37□□□□□ -0.27
PHF3-209ENST00000509330 BRD7Q9NPI1 651 aa13.37□□□□□ -0.27
PHF3-209ENST00000509330 FRRS1LQ9P0K9 344 aa13.37□□□□□ -0.27
PHF3-209ENST00000509330 MRPS18BQ9Y676 258 aaKnown RBP13.37□□□□□ -0.27
PHF3-209ENST00000509330 IGHV3-15A0A0B4J1V0 119 aa13.36□□□□□ -0.27
PHF3-209ENST00000509330 A0A0G2JMP0 313 aa13.36□□□□□ -0.27
PHF3-209ENST00000509330 A0A0X1KG70 313 aa13.36□□□□□ -0.27
PHF3-209ENST00000509330 ISPDA4D126 451 aa13.36□□□□□ -0.27
PHF3-209ENST00000509330 SC5DO75845 299 aa13.36□□□□□ -0.27
PHF3-209ENST00000509330 SDHBP21912 280 aa13.36□□□□□ -0.27
PHF3-209ENST00000509330 BIDP55957 195 aa13.36□□□□□ -0.27
PHF3-209ENST00000509330 OR2B6P58173 313 aa13.36□□□□□ -0.27
PHF3-209ENST00000509330 H1FNTQ75WM6 255 aaPredicted RBP13.36□□□□□ -0.27
PHF3-209ENST00000509330 RPS19BP1Q86WX3 136 aaKnown RBP13.36□□□□□ -0.27
PHF3-209ENST00000509330 Q8N402 240 aa13.36□□□□□ -0.27
PHF3-209ENST00000509330 MS4A15Q8N5U1 240 aa13.36□□□□□ -0.27
PHF3-209ENST00000509330 DNAAF1Q8NEP3 725 aa13.36□□□□□ -0.27
PHF3-209ENST00000509330 OR4M2Q8NGB6 313 aa13.36□□□□□ -0.27
PHF3-209ENST00000509330 TRMT10AQ8TBZ6 339 aaKnown RBP13.36□□□□□ -0.27
PHF3-209ENST00000509330 CT55Q8WUE5 264 aa13.36□□□□□ -0.27
PHF3-209ENST00000509330 RNF166Q96A37 237 aaPredicted RBP13.36□□□□□ -0.27
PHF3-209ENST00000509330 KLHL15Q96M94 604 aa13.36□□□□□ -0.27
PHF3-209ENST00000509330 CCDC32Q9BV29 185 aa13.36□□□□□ -0.27
PHF3-209ENST00000509330 PRRC2CQ9Y520 2896 aaKnown RBP13.36□□□□□ -0.27
PHF3-209ENST00000509330 LOC102723996A0A087X1L8 192 aa13.36□□□□□ -0.27
PHF3-209ENST00000509330 A0A1W2PNU3 283 aaPredicted RBP13.36□□□□□ -0.27
PHF3-209ENST00000509330 HTR3EA5X5Y0 456 aa13.36□□□□□ -0.27
PHF3-209ENST00000509330 PIN1P1O15428 100 aa13.36□□□□□ -0.27
PHF3-209ENST00000509330 UPK3AO75631 287 aa13.36□□□□□ -0.27
PHF3-209ENST00000509330 CD59P13987 128 aa13.36□□□□□ -0.27
PHF3-209ENST00000509330 CAMK2DQ13557 499 aa13.36□□□□□ -0.27
PHF3-209ENST00000509330 HSD17B12Q53GQ0 312 aa13.36□□□□□ -0.27
PHF3-209ENST00000509330 HBMQ6B0K9 141 aa13.36□□□□□ -0.27
PHF3-209ENST00000509330 PXKQ7Z7A4 578 aa13.36□□□□□ -0.27
PHF3-209ENST00000509330 IZUMO1Q8IYV9 350 aa13.36□□□□□ -0.27
PHF3-209ENST00000509330 HPS1Q92902 700 aa13.36□□□□□ -0.27
PHF3-209ENST00000509330 MRPL39Q9NYK5 338 aaKnown RBP13.36□□□□□ -0.27
PHF3-209ENST00000509330 TCFL5Q9UL49 500 aa13.36□□□□□ -0.27
PHF3-209ENST00000509330 A0A0G2JK05 382 aa13.35□□□□□ -0.27
PHF3-209ENST00000509330 TRIM3O75382 744 aaPredicted RBP13.35□□□□□ -0.27
PHF3-209ENST00000509330 APOA1P02647 267 aa13.35□□□□□ -0.27
PHF3-209ENST00000509330 NAGAP17050 411 aa13.35□□□□□ -0.27
PHF3-209ENST00000509330 ATF1P18846 271 aa13.35□□□□□ -0.27
PHF3-209ENST00000509330 ALOX5APP20292 161 aa13.35□□□□□ -0.27
PHF3-209ENST00000509330 DNASE1L1P49184 302 aa13.35□□□□□ -0.27
PHF3-209ENST00000509330 HSF1Q00613 529 aa13.35□□□□□ -0.27
PHF3-209ENST00000509330 SPEM2Q0P670 501 aa13.35□□□□□ -0.27
PHF3-209ENST00000509330 RAET1LQ5VY80 246 aa13.35□□□□□ -0.27
PHF3-209ENST00000509330 NAXDQ8IW45 347 aa13.35□□□□□ -0.27
PHF3-209ENST00000509330 ZNF676Q8N7Q3 588 aa13.35□□□□□ -0.27
PHF3-209ENST00000509330 ELOVL3Q9HB03 270 aa13.35□□□□□ -0.27
PHF3-209ENST00000509330 HPF1Q9NWY4 346 aa13.35□□□□□ -0.27
PHF3-209ENST00000509330 KLHL13Q9P2N7 655 aa13.35□□□□□ -0.27
PHF3-209ENST00000509330 SLC22A13Q9Y226 551 aa13.35□□□□□ -0.27
PHF3-209ENST00000509330 N6AMT1Q9Y5N5 214 aa13.35□□□□□ -0.27
PHF3-209ENST00000509330 ZFHX4Q86UP3 3567 aa13.35□□□□□ -0.27
PHF3-209ENST00000509330 A0A0G2JMM0 328 aa13.35□□□□□ -0.27
PHF3-209ENST00000509330 A0A1W2PPB8 328 aa13.35□□□□□ -0.27
PHF3-209ENST00000509330 A0A1W2PRS3 328 aa13.35□□□□□ -0.27
PHF3-209ENST00000509330 LIPT2A6NK58 231 aa13.35□□□□□ -0.27
PHF3-209ENST00000509330 KIR3DP1A8MWS1 328 aa13.35□□□□□ -0.27
PHF3-209ENST00000509330 H0YC42 278 aa13.35□□□□□ -0.27
PHF3-209ENST00000509330 TP53I11O14683 189 aa13.35□□□□□ -0.27
PHF3-209ENST00000509330 GP1BAP07359 652 aa13.35□□□□□ -0.27
PHF3-209ENST00000509330 SSR4P51571 173 aa13.35□□□□□ -0.27
PHF3-209ENST00000509330 MZT2AQ6P582 158 aa13.35□□□□□ -0.27
PHF3-209ENST00000509330 OR4M1Q8NGD0 313 aa13.35□□□□□ -0.27
PHF3-209ENST00000509330 ZNF700Q9H0M5 742 aa13.35□□□□□ -0.27
PHF3-209ENST00000509330 CHST11Q9NPF2 352 aa13.35□□□□□ -0.27
PHF3-209ENST00000509330 SDHAF3Q9NRP4 125 aa13.35□□□□□ -0.27
PHF3-209ENST00000509330 THBS2P35442 1172 aa13.35□□□□□ -0.27
PHF3-209ENST00000509330 Q0VFX4 171 aa13.35□□□□□ -0.27
PHF3-209ENST00000509330 EIF2B1Q14232 305 aaKnown RBP13.35□□□□□ -0.27
PHF3-209ENST00000509330 CEP78Q5JTW2 689 aa13.35□□□□□ -0.27
PHF3-209ENST00000509330 ZNF684Q5T5D7 378 aa13.35□□□□□ -0.27
PHF3-209ENST00000509330 C6orf15Q6UXA7 325 aaPredicted RBP13.35□□□□□ -0.27
PHF3-209ENST00000509330 ZNF517Q6ZMY9 492 aaPredicted RBP13.35□□□□□ -0.27
PHF3-209ENST00000509330 OR5AK2Q8NH90 309 aa13.35□□□□□ -0.27
PHF3-209ENST00000509330 ZNF775Q96BV0 537 aaPredicted RBP13.35□□□□□ -0.27
PHF3-209ENST00000509330 EDEM2Q9BV94 578 aa13.35□□□□□ -0.27
PHF3-209ENST00000509330 SERINC1Q9NRX5 453 aa13.35□□□□□ -0.27
PHF3-209ENST00000509330 UGT2A1Q9Y4X1 527 aa13.35□□□□□ -0.27
PHF3-209ENST00000509330 RTTNQ86VV8 2226 aa13.34□□□□□ -0.27
PHF3-209ENST00000509330 IGLV1-36A0A0B4J1U3 117 aa13.34□□□□□ -0.27
PHF3-209ENST00000509330 C9orf172C9J069 976 aa13.34□□□□□ -0.27
PHF3-209ENST00000509330 DKK1O94907 266 aa13.34□□□□□ -0.27
PHF3-209ENST00000509330 EVX1P49640 407 aa13.34□□□□□ -0.27
PHF3-209ENST00000509330 XKRXQ6PP77 449 aa13.34□□□□□ -0.27
PHF3-209ENST00000509330 ASB18Q6ZVZ8 466 aa13.34□□□□□ -0.27
PHF3-209ENST00000509330 PPP1R32Q7Z5V6 425 aa13.34□□□□□ -0.27
PHF3-209ENST00000509330 MFSD8Q8NHS3 518 aa13.34□□□□□ -0.27
PHF3-209ENST00000509330 OTOSQ8NHW6 89 aa13.34□□□□□ -0.27
PHF3-209ENST00000509330 ZNF671Q8TAW3 534 aa13.34□□□□□ -0.27
PHF3-209ENST00000509330 C11orf54Q9H0W9 315 aaPredicted RBP13.34□□□□□ -0.27
PHF3-209ENST00000509330 PTGES2Q9H7Z7 377 aa13.34□□□□□ -0.27
PHF3-209ENST00000509330 FBXL3Q9UKT7 428 aa13.34□□□□□ -0.27
PHF3-209ENST00000509330 ZNF281Q9Y2X9 895 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms