RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 SMCO2A6NFE2 343 aa3.68□□□□□ -1.82
SSR3-208ENST00000496050 CDC7O00311 574 aa3.68□□□□□ -1.82
SSR3-208ENST00000496050 LAD1O00515 517 aa3.68□□□□□ -1.82
SSR3-208ENST00000496050 MRPS12O15235 138 aaKnown RBP3.68□□□□□ -1.82
SSR3-208ENST00000496050 TRAF3IP2O43734 574 aaPredicted RBP3.68□□□□□ -1.82
SSR3-208ENST00000496050 ZNF861PO60384 105 aa3.68□□□□□ -1.82
SSR3-208ENST00000496050 EEDO75530 441 aaKnown RBP3.68□□□□□ -1.82
SSR3-208ENST00000496050 H6PDO95479 791 aa3.68□□□□□ -1.82
SSR3-208ENST00000496050 MOSP00540 346 aa3.68□□□□□ -1.82
SSR3-208ENST00000496050 ANXA5P08758 320 aa3.68□□□□□ -1.82
SSR3-208ENST00000496050 DUX4L4P0CJ87 422 aa3.68□□□□□ -1.82
SSR3-208ENST00000496050 CALM1P0DP23 149 aa3.68□□□□□ -1.82
SSR3-208ENST00000496050 CALM2P0DP24 149 aa3.68□□□□□ -1.82
SSR3-208ENST00000496050 CALM3P0DP25 149 aa3.68□□□□□ -1.82
SSR3-208ENST00000496050 SERPINB5P36952 375 aa3.68□□□□□ -1.82
SSR3-208ENST00000496050 KRTAP10-7P60409 375 aaPredicted RBP3.68□□□□□ -1.82
SSR3-208ENST00000496050 ADARB1P78563 741 aaKnown RBP3.68□□□□□ -1.82
SSR3-208ENST00000496050 TWF1Q12792 350 aa3.68□□□□□ -1.82
SSR3-208ENST00000496050 MERTKQ12866 999 aa3.68□□□□□ -1.82
SSR3-208ENST00000496050 PRPSAP1Q14558 356 aa3.68□□□□□ -1.82
SSR3-208ENST00000496050 SGCAQ16586 387 aa3.68□□□□□ -1.82
SSR3-208ENST00000496050 LCE1EQ5T753 118 aa3.68□□□□□ -1.82
SSR3-208ENST00000496050 TMEM179Q6ZVK1 233 aa3.68□□□□□ -1.82
SSR3-208ENST00000496050 CAMK2N1Q7Z7J9 78 aa3.68□□□□□ -1.82
SSR3-208ENST00000496050 CCDC148Q8NFR7 591 aa3.68□□□□□ -1.82
SSR3-208ENST00000496050 BLOC1S5Q8TDH9 187 aa3.68□□□□□ -1.82
SSR3-208ENST00000496050 PIK3IP1Q96FE7 263 aa3.68□□□□□ -1.82
SSR3-208ENST00000496050 AURKBQ96GD4 344 aaPredicted RBP3.68□□□□□ -1.82
SSR3-208ENST00000496050 OR51M1Q9H341 326 aa3.68□□□□□ -1.82
SSR3-208ENST00000496050 EXO5Q9H790 373 aa3.68□□□□□ -1.82
SSR3-208ENST00000496050 FGF20Q9NP95 211 aaPredicted RBP3.68□□□□□ -1.82
SSR3-208ENST00000496050 CTPS2Q9NRF8 586 aa3.68□□□□□ -1.82
SSR3-208ENST00000496050 ZNF226Q9NYT6 803 aa3.68□□□□□ -1.82
SSR3-208ENST00000496050 DEC1Q9P2X7 70 aa3.68□□□□□ -1.82
SSR3-208ENST00000496050 LSM7Q9UK45 103 aaKnown RBP3.68□□□□□ -1.82
SSR3-208ENST00000496050 TP53TG5Q9Y2B4 290 aa3.68□□□□□ -1.82
SSR3-208ENST00000496050 GOLT1BQ9Y3E0 138 aa3.68□□□□□ -1.82
SSR3-208ENST00000496050 AKNAQ7Z591 1439 aa3.68□□□□□ -1.82
SSR3-208ENST00000496050 A6NDX4 124 aa3.67□□□□□ -1.82
SSR3-208ENST00000496050 OR2AG2A6NM03 316 aa3.67□□□□□ -1.82
SSR3-208ENST00000496050 CACNG3O60359 315 aa3.67□□□□□ -1.82
SSR3-208ENST00000496050 ZNF17P17021 662 aa3.67□□□□□ -1.82
SSR3-208ENST00000496050 RCC1P18754 421 aaPredicted RBP3.67□□□□□ -1.82
SSR3-208ENST00000496050 AK4P27144 223 aaPredicted RBP3.67□□□□□ -1.82
SSR3-208ENST00000496050 NMUP48645 174 aa3.67□□□□□ -1.82
SSR3-208ENST00000496050 CX3CR1P49238 355 aa3.67□□□□□ -1.82
SSR3-208ENST00000496050 FGF8P55075 233 aaPredicted RBP3.67□□□□□ -1.82
SSR3-208ENST00000496050 RAB10P61026 200 aa3.67□□□□□ -1.82
SSR3-208ENST00000496050 RPS15P62841 145 aaKnown RBP3.67□□□□□ -1.82
SSR3-208ENST00000496050 SMARCB1Q12824 385 aa3.67□□□□□ -1.82
SSR3-208ENST00000496050 IL18Q14116 193 aa3.67□□□□□ -1.82
SSR3-208ENST00000496050 CHRNA6Q15825 494 aa3.67□□□□□ -1.82
SSR3-208ENST00000496050 MRPL23Q16540 153 aaKnown RBP3.67□□□□□ -1.82
SSR3-208ENST00000496050 VAX1Q5SQQ9 334 aa3.67□□□□□ -1.82
SSR3-208ENST00000496050 C22orf42Q6IC83 251 aa3.67□□□□□ -1.82
SSR3-208ENST00000496050 ANKRD26P1Q6NSI1 321 aa3.67□□□□□ -1.82
SSR3-208ENST00000496050 REEP3Q6NUK4 255 aa3.67□□□□□ -1.82
SSR3-208ENST00000496050 MKXQ8IYA7 352 aa3.67□□□□□ -1.82
SSR3-208ENST00000496050 MREGQ8N565 214 aa3.67□□□□□ -1.82
SSR3-208ENST00000496050 Q8N7P7 452 aa3.67□□□□□ -1.82
SSR3-208ENST00000496050 Q8N9W7 124 aa3.67□□□□□ -1.82
SSR3-208ENST00000496050 OR4A4PQ8NGN8 299 aa3.67□□□□□ -1.82
SSR3-208ENST00000496050 SLC7A13Q8TCU3 470 aa3.67□□□□□ -1.82
SSR3-208ENST00000496050 PKNOX2Q96KN3 472 aa3.67□□□□□ -1.82
SSR3-208ENST00000496050 FAM210BQ96KR6 192 aa3.67□□□□□ -1.82
SSR3-208ENST00000496050 TSSK3Q96PN8 268 aa3.67□□□□□ -1.82
SSR3-208ENST00000496050 GSDMAQ96QA5 445 aa3.67□□□□□ -1.82
SSR3-208ENST00000496050 P2RX4Q99571 388 aa3.67□□□□□ -1.82
SSR3-208ENST00000496050 SLC29A1Q99808 456 aa3.67□□□□□ -1.82
SSR3-208ENST00000496050 MTG1Q9BT17 334 aaPredicted RBP3.67□□□□□ -1.82
SSR3-208ENST00000496050 GABARAPL3Q9BY60 117 aa3.67□□□□□ -1.82
SSR3-208ENST00000496050 ANAPC11Q9NYG5 84 aa3.67□□□□□ -1.82
SSR3-208ENST00000496050 GCNT4Q9P109 453 aa3.67□□□□□ -1.82
SSR3-208ENST00000496050 NYAP2Q9P242 653 aa3.67□□□□□ -1.82
SSR3-208ENST00000496050 STOX2Q9P2F5 926 aaPredicted RBP3.67□□□□□ -1.82
SSR3-208ENST00000496050 TRAPPC4Q9Y296 219 aa3.67□□□□□ -1.82
SSR3-208ENST00000496050 CAB39Q9Y376 341 aaPredicted RBP3.67□□□□□ -1.82
SSR3-208ENST00000496050 CNTNAP1P78357 1384 aa3.66□□□□□ -1.82
SSR3-208ENST00000496050 CEMIPQ8WUJ3 1361 aa3.66□□□□□ -1.82
SSR3-208ENST00000496050 MEGF6O75095 1541 aa3.66□□□□□ -1.82
SSR3-208ENST00000496050 WI2-2373I1.2A0A1W2PRP0 233 aa3.66□□□□□ -1.82
SSR3-208ENST00000496050 SIRPB1O00241 398 aa3.66□□□□□ -1.82
SSR3-208ENST00000496050 WRBO00258 174 aa3.66□□□□□ -1.82
SSR3-208ENST00000496050 NDUFAB1O14561 156 aa3.66□□□□□ -1.82
SSR3-208ENST00000496050 CASQ2O14958 399 aaPredicted RBP3.66□□□□□ -1.82
SSR3-208ENST00000496050 TSPAN13O95857 204 aa3.66□□□□□ -1.82
SSR3-208ENST00000496050 C6orf47O95873 294 aa3.66□□□□□ -1.82
SSR3-208ENST00000496050 IGHV3-43DP0DP04 118 aa3.66□□□□□ -1.82
SSR3-208ENST00000496050 MYL2P10916 166 aa3.66□□□□□ -1.82
SSR3-208ENST00000496050 SFTPCP11686 197 aa3.66□□□□□ -1.82
SSR3-208ENST00000496050 SLC1A1P43005 524 aa3.66□□□□□ -1.82
SSR3-208ENST00000496050 ATP5OP48047 213 aa3.66□□□□□ -1.82
SSR3-208ENST00000496050 LHX2P50458 406 aa3.66□□□□□ -1.82
SSR3-208ENST00000496050 KRTAP10-5P60370 271 aa3.66□□□□□ -1.82
SSR3-208ENST00000496050 GBE1Q04446 702 aa3.66□□□□□ -1.82
SSR3-208ENST00000496050 REG3AQ06141 175 aa3.66□□□□□ -1.82
SSR3-208ENST00000496050 CKAP4Q07065 602 aaKnown RBP3.66□□□□□ -1.82
SSR3-208ENST00000496050 GUCA2BQ16661 112 aa3.66□□□□□ -1.82
SSR3-208ENST00000496050 CCNJQ5T5M9 372 aa3.66□□□□□ -1.82
SSR3-208ENST00000496050 SLC16A14Q7RTX9 510 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms