RNA–Protein interactions for RNA: ENST00000494742.5

PCCB-219, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-219ENST00000494742 WDFY1Q8IWB7 410 aa12.49□□□□□ -0.41
PCCB-219ENST00000494742 C10orf53Q8N6V4 93 aa12.49□□□□□ -0.41
PCCB-219ENST00000494742 ANKRD42Q8N9B4 389 aa12.49□□□□□ -0.41
PCCB-219ENST00000494742 SLC30A7Q8NEW0 376 aa12.49□□□□□ -0.41
PCCB-219ENST00000494742 OR1J2Q8NGS2 313 aa12.49□□□□□ -0.41
PCCB-219ENST00000494742 SYNPRQ8TBG9 265 aa12.49□□□□□ -0.41
PCCB-219ENST00000494742 C11orf40Q8WZ69 217 aa12.49□□□□□ -0.41
PCCB-219ENST00000494742 SLC25A44Q96H78 314 aaPredicted RBP12.49□□□□□ -0.41
PCCB-219ENST00000494742 OR52B2Q96RD2 323 aa12.49□□□□□ -0.41
PCCB-219ENST00000494742 BCL2L14Q9BZR8 327 aa12.49□□□□□ -0.41
PCCB-219ENST00000494742 TMEM38BQ9NVV0 291 aa12.49□□□□□ -0.41
PCCB-219ENST00000494742 SLC25A37Q9NYZ2 338 aa12.49□□□□□ -0.41
PCCB-219ENST00000494742 GLTPQ9NZD2 209 aa12.49□□□□□ -0.41
PCCB-219ENST00000494742 CORO2BQ9UQ03 480 aa12.49□□□□□ -0.41
PCCB-219ENST00000494742 LOC105371242A0A075B767 164 aa12.48□□□□□ -0.41
PCCB-219ENST00000494742 IGHV1-69-2A0A0G2JMI3 117 aa12.48□□□□□ -0.41
PCCB-219ENST00000494742 TMEM120BA0PK00 339 aa12.48□□□□□ -0.41
PCCB-219ENST00000494742 PLPP2O43688 288 aa12.48□□□□□ -0.41
PCCB-219ENST00000494742 TPST2O60704 377 aa12.48□□□□□ -0.41
PCCB-219ENST00000494742 DEAF1O75398 565 aaPredicted RBP12.48□□□□□ -0.41
PCCB-219ENST00000494742 AVPP01185 164 aa12.48□□□□□ -0.41
PCCB-219ENST00000494742 MT-ND5P03915 603 aa12.48□□□□□ -0.41
PCCB-219ENST00000494742 SLC6A2P23975 617 aa12.48□□□□□ -0.41
PCCB-219ENST00000494742 STX1BP61266 288 aa12.48□□□□□ -0.41
PCCB-219ENST00000494742 CCL8P80075 99 aa12.48□□□□□ -0.41
PCCB-219ENST00000494742 RBBP4Q09028 425 aa12.48□□□□□ -0.41
PCCB-219ENST00000494742 SLC36A2Q495M3 483 aa12.48□□□□□ -0.41
PCCB-219ENST00000494742 FAM209AQ5JX71 171 aa12.48□□□□□ -0.41
PCCB-219ENST00000494742 TMEM53Q6P2H8 277 aa12.48□□□□□ -0.41
PCCB-219ENST00000494742 WDR88Q6ZMY6 472 aa12.48□□□□□ -0.41
PCCB-219ENST00000494742 SLC35D2Q76EJ3 337 aa12.48□□□□□ -0.41
PCCB-219ENST00000494742 FGFBP3Q8TAT2 258 aa12.48□□□□□ -0.41
PCCB-219ENST00000494742 NANPQ8TBE9 248 aa12.48□□□□□ -0.41
PCCB-219ENST00000494742 ZNF566Q969W8 418 aa12.48□□□□□ -0.41
PCCB-219ENST00000494742 TMPRSS13Q9BYE2 586 aa12.48□□□□□ -0.41
PCCB-219ENST00000494742 PARD6BQ9BYG5 372 aa12.48□□□□□ -0.41
PCCB-219ENST00000494742 LRMDAQ9H2I8 198 aa12.48□□□□□ -0.41
PCCB-219ENST00000494742 CDH20Q9HBT6 801 aa12.48□□□□□ -0.41
PCCB-219ENST00000494742 MEGF8Q7Z7M0 2845 aa12.47□□□□□ -0.41
PCCB-219ENST00000494742 CLDN25C9JDP6 229 aa12.47□□□□□ -0.41
PCCB-219ENST00000494742 LRRN3E7EW58 273 aa12.47□□□□□ -0.41
PCCB-219ENST00000494742 DHHO43323 396 aa12.47□□□□□ -0.41
PCCB-219ENST00000494742 CHP2O43745 196 aa12.47□□□□□ -0.41
PCCB-219ENST00000494742 CDC14BO60729 498 aa12.47□□□□□ -0.41
PCCB-219ENST00000494742 SERPINI2O75830 405 aa12.47□□□□□ -0.41
PCCB-219ENST00000494742 BCL10O95999 233 aa12.47□□□□□ -0.41
PCCB-219ENST00000494742 CLPTM1O96005 669 aa12.47□□□□□ -0.41
PCCB-219ENST00000494742 PATE4P0C8F1 98 aa12.47□□□□□ -0.41
PCCB-219ENST00000494742 FAM157BP0CG42 384 aa12.47□□□□□ -0.41
PCCB-219ENST00000494742 GPX2P18283 190 aa12.47□□□□□ -0.41
PCCB-219ENST00000494742 UCP2P55851 309 aa12.47□□□□□ -0.41
PCCB-219ENST00000494742 MVKQ03426 396 aa12.47□□□□□ -0.41
PCCB-219ENST00000494742 SCARB2Q14108 478 aa12.47□□□□□ -0.41
PCCB-219ENST00000494742 TBC1D28Q2M2D7 210 aa12.47□□□□□ -0.41
PCCB-219ENST00000494742 LRFN4Q6PJG9 635 aa12.47□□□□□ -0.41
PCCB-219ENST00000494742 BLOC1S3Q6QNY0 202 aa12.47□□□□□ -0.41
PCCB-219ENST00000494742 ARMC8Q8IUR7 673 aa12.47□□□□□ -0.41
PCCB-219ENST00000494742 MSRB3Q8IXL7 192 aa12.47□□□□□ -0.41
PCCB-219ENST00000494742 HIPK4Q8NE63 616 aa12.47□□□□□ -0.41
PCCB-219ENST00000494742 RAB1CQ92928 201 aa12.47□□□□□ -0.41
PCCB-219ENST00000494742 TIMD4Q96H15 378 aa12.47□□□□□ -0.41
PCCB-219ENST00000494742 RNF121Q9H920 327 aa12.47□□□□□ -0.41
PCCB-219ENST00000494742 DECR2Q9NUI1 292 aa12.47□□□□□ -0.41
PCCB-219ENST00000494742 ARGLU1Q9NWB6 273 aaPredicted RBP12.47□□□□□ -0.41
PCCB-219ENST00000494742 TAS2R5Q9NYW4 299 aa12.47□□□□□ -0.41
PCCB-219ENST00000494742 TRBV5-3A0A0A0MS03 114 aa12.46□□□□□ -0.41
PCCB-219ENST00000494742 EVPLLA8MZ36 301 aa12.46□□□□□ -0.41
PCCB-219ENST00000494742 C11orf98E9PRG8 122 aa12.46□□□□□ -0.41
PCCB-219ENST00000494742 RGS9O75916 674 aaPredicted RBP12.46□□□□□ -0.41
PCCB-219ENST00000494742 MFN2O95140 757 aa12.46□□□□□ -0.41
PCCB-219ENST00000494742 IGHV3-13P01766 116 aa12.46□□□□□ -0.41
PCCB-219ENST00000494742 IGHV2-5P01817 119 aa12.46□□□□□ -0.41
PCCB-219ENST00000494742 LCKP06239 509 aa12.46□□□□□ -0.41
PCCB-219ENST00000494742 PGA4P0DJD7 388 aa12.46□□□□□ -0.41
PCCB-219ENST00000494742 PGA3P0DJD8 388 aa12.46□□□□□ -0.41
PCCB-219ENST00000494742 PLP2Q04941 152 aa12.46□□□□□ -0.41
PCCB-219ENST00000494742 ZNF74Q16587 644 aa12.46□□□□□ -0.41
PCCB-219ENST00000494742 HFEQ30201 348 aa12.46□□□□□ -0.41
PCCB-219ENST00000494742 ALKBH6Q3KRA9 238 aa12.46□□□□□ -0.41
PCCB-219ENST00000494742 DCAF12L2Q5VW00 463 aa12.46□□□□□ -0.41
PCCB-219ENST00000494742 EPGNQ6UW88 154 aa12.46□□□□□ -0.41
PCCB-219ENST00000494742 C10orf111Q8N326 155 aa12.46□□□□□ -0.41
PCCB-219ENST00000494742 BPIFB2Q8N4F0 458 aa12.46□□□□□ -0.41
PCCB-219ENST00000494742 PAQR4Q8N4S7 273 aaPredicted RBP12.46□□□□□ -0.41
PCCB-219ENST00000494742 SH3GL3Q99963 347 aa12.46□□□□□ -0.41
PCCB-219ENST00000494742 NTN4Q9HB63 628 aa12.46□□□□□ -0.41
PCCB-219ENST00000494742 SLCO1B3Q9NPD5 702 aa12.46□□□□□ -0.41
PCCB-219ENST00000494742 NANSQ9NR45 359 aa12.46□□□□□ -0.41
PCCB-219ENST00000494742 VAPAQ9P0L0 249 aa12.46□□□□□ -0.41
PCCB-219ENST00000494742 SLAMF8Q9P0V8 285 aa12.46□□□□□ -0.41
PCCB-219ENST00000494742 RAB21Q9UL25 225 aa12.46□□□□□ -0.41
PCCB-219ENST00000494742 WIPI2Q9Y4P8 454 aa12.46□□□□□ -0.41
PCCB-219ENST00000494742 MGAM2Q2M2H8 2515 aa12.46□□□□□ -0.42
PCCB-219ENST00000494742 IQCMA0A1B0GVH7 501 aa12.45□□□□□ -0.42
PCCB-219ENST00000494742 CENPBD1B2RD01 187 aa12.45□□□□□ -0.42
PCCB-219ENST00000494742 TGDSO95455 350 aa12.45□□□□□ -0.42
PCCB-219ENST00000494742 VIMP08670 466 aaKnown RBP12.45□□□□□ -0.42
PCCB-219ENST00000494742 QDPRP09417 244 aa12.45□□□□□ -0.42
PCCB-219ENST00000494742 H2AFXP16104 143 aaPredicted RBP12.45□□□□□ -0.42
PCCB-219ENST00000494742 DRD4P21917 467 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms