RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 SPOCK1Q08629 439 aa9.09□□□□□ -0.95
TRAPPC12-222ENST00000493792 SEC23BQ15437 767 aa9.09□□□□□ -0.95
TRAPPC12-222ENST00000493792 ZBED5Q49AG3 693 aa9.09□□□□□ -0.95
TRAPPC12-222ENST00000493792 FAM98BQ52LJ0 330 aaKnown RBP9.09□□□□□ -0.95
TRAPPC12-222ENST00000493792 SHEQ5VZ18 495 aa9.09□□□□□ -0.95
TRAPPC12-222ENST00000493792 LCN8Q6JVE9 175 aa9.09□□□□□ -0.95
TRAPPC12-222ENST00000493792 SEZ6L2Q6UXD5 910 aa9.09□□□□□ -0.95
TRAPPC12-222ENST00000493792 NHLRC1Q6VVB1 395 aa9.09□□□□□ -0.95
TRAPPC12-222ENST00000493792 C20orf204Q6ZNR8 217 aa9.09□□□□□ -0.95
TRAPPC12-222ENST00000493792 NOXO1Q8NFA2 376 aa9.09□□□□□ -0.95
TRAPPC12-222ENST00000493792 ASB10Q8WXI3 467 aa9.09□□□□□ -0.95
TRAPPC12-222ENST00000493792 TMEM54Q969K7 222 aa9.09□□□□□ -0.95
TRAPPC12-222ENST00000493792 FBXW5Q969U6 566 aa9.09□□□□□ -0.95
TRAPPC12-222ENST00000493792 BTBD10Q9BSF8 475 aa9.09□□□□□ -0.95
TRAPPC12-222ENST00000493792 TMEM204Q9BSN7 226 aa9.09□□□□□ -0.95
TRAPPC12-222ENST00000493792 TXNIPQ9H3M7 391 aa9.09□□□□□ -0.95
TRAPPC12-222ENST00000493792 CISD1Q9NZ45 108 aaKnown RBP9.09□□□□□ -0.95
TRAPPC12-222ENST00000493792 STX18Q9P2W9 335 aaKnown RBP9.09□□□□□ -0.95
TRAPPC12-222ENST00000493792 GRHPRQ9UBQ7 328 aa9.09□□□□□ -0.95
TRAPPC12-222ENST00000493792 MGAT4BQ9UQ53 548 aa9.09□□□□□ -0.95
TRAPPC12-222ENST00000493792 HIF3AQ9Y2N7 669 aa9.09□□□□□ -0.95
TRAPPC12-222ENST00000493792 ATP23Q9Y6H3 246 aa9.09□□□□□ -0.95
TRAPPC12-222ENST00000493792 ARPC4-TTLL3A0A0A6YYG9 625 aa9.08□□□□□ -0.96
TRAPPC12-222ENST00000493792 TCRBV5S2A0A599 114 aa9.08□□□□□ -0.96
TRAPPC12-222ENST00000493792 SH3PXD2BA1X283 911 aa9.08□□□□□ -0.96
TRAPPC12-222ENST00000493792 UNC119BA6NIH7 251 aa9.08□□□□□ -0.96
TRAPPC12-222ENST00000493792 INAFM1C9JVW0 142 aa9.08□□□□□ -0.96
TRAPPC12-222ENST00000493792 TNFRSF11BO00300 401 aa9.08□□□□□ -0.96
TRAPPC12-222ENST00000493792 DHHO43323 396 aa9.08□□□□□ -0.96
TRAPPC12-222ENST00000493792 SMPD2O60906 423 aa9.08□□□□□ -0.96
TRAPPC12-222ENST00000493792 HLA-HP01893 362 aa9.08□□□□□ -0.96
TRAPPC12-222ENST00000493792 PGA4P0DJD7 388 aa9.08□□□□□ -0.96
TRAPPC12-222ENST00000493792 PGA3P0DJD8 388 aa9.08□□□□□ -0.96
TRAPPC12-222ENST00000493792 HOXB1P14653 301 aaPredicted RBP9.08□□□□□ -0.96
TRAPPC12-222ENST00000493792 IFNGR2P38484 337 aa9.08□□□□□ -0.96
TRAPPC12-222ENST00000493792 ERFP50548 548 aa9.08□□□□□ -0.96
TRAPPC12-222ENST00000493792 RASSF2P50749 326 aa9.08□□□□□ -0.96
TRAPPC12-222ENST00000493792 IDH3GP51553 393 aaPredicted RBP9.08□□□□□ -0.96
TRAPPC12-222ENST00000493792 RPL27P61353 136 aaKnown RBP9.08□□□□□ -0.96
TRAPPC12-222ENST00000493792 RUNX1T1Q06455 604 aa9.08□□□□□ -0.96
TRAPPC12-222ENST00000493792 FLOT2Q14254 428 aa9.08□□□□□ -0.96
TRAPPC12-222ENST00000493792 ZNF672Q499Z4 452 aaPredicted RBP9.08□□□□□ -0.96
TRAPPC12-222ENST00000493792 TMPRSS11FQ6ZWK6 438 aa9.08□□□□□ -0.96
TRAPPC12-222ENST00000493792 SPATA24Q86W54 205 aa9.08□□□□□ -0.96
TRAPPC12-222ENST00000493792 MAGEE2Q8TD90 523 aaPredicted RBP9.08□□□□□ -0.96
TRAPPC12-222ENST00000493792 TMEM171Q8WVE6 324 aa9.08□□□□□ -0.96
TRAPPC12-222ENST00000493792 NSMAFQ92636 917 aa9.08□□□□□ -0.96
TRAPPC12-222ENST00000493792 HTRA1Q92743 480 aa9.08□□□□□ -0.96
TRAPPC12-222ENST00000493792 PIGTQ969N2 578 aa9.08□□□□□ -0.96
TRAPPC12-222ENST00000493792 SLC7A6OSQ96CW6 309 aaPredicted RBP9.08□□□□□ -0.96
TRAPPC12-222ENST00000493792 RSRC1Q96IZ7 334 aaKnown RBP9.08□□□□□ -0.96
TRAPPC12-222ENST00000493792 DHRS1Q96LJ7 313 aa9.08□□□□□ -0.96
TRAPPC12-222ENST00000493792 SLC38A2Q96QD8 506 aa9.08□□□□□ -0.96
TRAPPC12-222ENST00000493792 KATNB1Q9BVA0 655 aa9.08□□□□□ -0.96
TRAPPC12-222ENST00000493792 NELFAQ9H3P2 528 aa9.08□□□□□ -0.96
TRAPPC12-222ENST00000493792 MAGIXQ9H6Y5 334 aa9.08□□□□□ -0.96
TRAPPC12-222ENST00000493792 RNF121Q9H920 327 aa9.08□□□□□ -0.96
TRAPPC12-222ENST00000493792 ZNF346Q9UL40 294 aaKnown RBP9.08□□□□□ -0.96
TRAPPC12-222ENST00000493792 MOKQ9UQ07 419 aa9.08□□□□□ -0.96
TRAPPC12-222ENST00000493792 ZANQ9Y493 2812 aa9.08□□□□□ -0.96
TRAPPC12-222ENST00000493792 IGHV1-18A0A0C4DH31 117 aa9.07□□□□□ -0.96
TRAPPC12-222ENST00000493792 A6NIZ1 184 aa9.07□□□□□ -0.96
TRAPPC12-222ENST00000493792 SHISA9B4DS77 424 aa9.07□□□□□ -0.96
TRAPPC12-222ENST00000493792 ATP6V1G2-DDX39BF2Z307 99 aa9.07□□□□□ -0.96
TRAPPC12-222ENST00000493792 XKRYO14609 159 aa9.07□□□□□ -0.96
TRAPPC12-222ENST00000493792 GNGT2O14610 69 aa9.07□□□□□ -0.96
TRAPPC12-222ENST00000493792 ARHGEF9O43307 516 aa9.07□□□□□ -0.96
TRAPPC12-222ENST00000493792 ENTPD5O75356 428 aa9.07□□□□□ -0.96
TRAPPC12-222ENST00000493792 NDUFB2O95178 105 aa9.07□□□□□ -0.96
TRAPPC12-222ENST00000493792 FARS2O95363 451 aaKnown RBP9.07□□□□□ -0.96
TRAPPC12-222ENST00000493792 SLC2A10O95528 541 aa9.07□□□□□ -0.96
TRAPPC12-222ENST00000493792 CRYAAP02489 173 aa9.07□□□□□ -0.96
TRAPPC12-222ENST00000493792 NR2C1P13056 603 aa9.07□□□□□ -0.96
TRAPPC12-222ENST00000493792 OMPP47874 163 aa9.07□□□□□ -0.96
TRAPPC12-222ENST00000493792 RAP1BP61224 184 aa9.07□□□□□ -0.96
TRAPPC12-222ENST00000493792 RPS4XP62701 263 aaKnown RBP9.07□□□□□ -0.96
TRAPPC12-222ENST00000493792 RAP1AP62834 184 aa9.07□□□□□ -0.96
TRAPPC12-222ENST00000493792 TRAP1Q12931 704 aaKnown RBP9.07□□□□□ -0.96
TRAPPC12-222ENST00000493792 PPP1R8Q12972 351 aaKnown RBP9.07□□□□□ -0.96
TRAPPC12-222ENST00000493792 BNIP1Q12981 228 aa9.07□□□□□ -0.96
TRAPPC12-222ENST00000493792 SGCAQ16586 387 aa9.07□□□□□ -0.96
TRAPPC12-222ENST00000493792 GSG1Q2KHT4 349 aa9.07□□□□□ -0.96
TRAPPC12-222ENST00000493792 ANKDD1AQ495B1 522 aa9.07□□□□□ -0.96
TRAPPC12-222ENST00000493792 IQCCQ4KMZ1 466 aa9.07□□□□□ -0.96
TRAPPC12-222ENST00000493792 ARMC4Q5T2S8 1044 aa9.07□□□□□ -0.96
TRAPPC12-222ENST00000493792 C1QTNF12Q5T7M4 302 aa9.07□□□□□ -0.96
TRAPPC12-222ENST00000493792 FAM205BPQ63HN1 556 aa9.07□□□□□ -0.96
TRAPPC12-222ENST00000493792 LRFN4Q6PJG9 635 aa9.07□□□□□ -0.96
TRAPPC12-222ENST00000493792 PIWIL3Q7Z3Z3 882 aaKnown RBP9.07□□□□□ -0.96
TRAPPC12-222ENST00000493792 MDP1Q86V88 176 aa9.07□□□□□ -0.96
TRAPPC12-222ENST00000493792 CCDC36Q8IYA8 594 aa9.07□□□□□ -0.96
TRAPPC12-222ENST00000493792 ZNF611Q8N823 705 aa9.07□□□□□ -0.96
TRAPPC12-222ENST00000493792 LILRB1Q8NHL6 650 aaPredicted RBP9.07□□□□□ -0.96
TRAPPC12-222ENST00000493792 SMAP2Q8WU79 429 aaPredicted RBP9.07□□□□□ -0.96
TRAPPC12-222ENST00000493792 HDAC2Q92769 488 aaKnown RBP9.07□□□□□ -0.96
TRAPPC12-222ENST00000493792 POP5Q969H6 163 aaKnown RBP9.07□□□□□ -0.96
TRAPPC12-222ENST00000493792 MCHR2Q969V1 340 aa9.07□□□□□ -0.96
TRAPPC12-222ENST00000493792 GTPBP3Q969Y2 492 aaKnown RBP9.07□□□□□ -0.96
TRAPPC12-222ENST00000493792 PERPQ96FX8 193 aa9.07□□□□□ -0.96
TRAPPC12-222ENST00000493792 ZNF570Q96NI8 536 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms