RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	ICA1L	Q8NDH6	482 aa		11.64	□□□□□ -0.55
SAMM50-204	ENST00000493161	NANP	Q8TBE9	248 aa		11.64	□□□□□ -0.55
SAMM50-204	ENST00000493161	TAF15	Q92804	592 aa	Known RBP eCLIP	11.64	□□□□□ -0.55
SAMM50-204	ENST00000493161	DVL3	Q92997	716 aa	Predicted RBP	11.64	□□□□□ -0.55
SAMM50-204	ENST00000493161	RAB39B	Q96DA2	213 aa		11.64	□□□□□ -0.55
SAMM50-204	ENST00000493161	MAEL	Q96JY0	434 aa	Known RBP	11.64	□□□□□ -0.55
SAMM50-204	ENST00000493161	EPYC	Q99645	322 aa		11.64	□□□□□ -0.55
SAMM50-204	ENST00000493161	C7orf69	Q9H7B7	122 aa		11.64	□□□□□ -0.55
SAMM50-204	ENST00000493161	ZNF696	Q9H7X3	374 aa		11.64	□□□□□ -0.55
SAMM50-204	ENST00000493161	TMEM38B	Q9NVV0	291 aa		11.64	□□□□□ -0.55
SAMM50-204	ENST00000493161	GLTP	Q9NZD2	209 aa		11.64	□□□□□ -0.55
SAMM50-204	ENST00000493161	ZIM2	Q9NZV7	527 aa		11.64	□□□□□ -0.55
SAMM50-204	ENST00000493161	FBXL3	Q9UKT7	428 aa		11.64	□□□□□ -0.55
SAMM50-204	ENST00000493161	ARHGAP32	A7KAX9	2087 aa		11.64	□□□□□ -0.55
SAMM50-204	ENST00000493161		J3QLI3	93 aa		11.63	□□□□□ -0.55
SAMM50-204	ENST00000493161	ADORA3	P0DMS8	318 aa		11.63	□□□□□ -0.55
SAMM50-204	ENST00000493161	OR8G3P	P0DMU2	310 aa		11.63	□□□□□ -0.55
SAMM50-204	ENST00000493161	HKR1	P10072	659 aa		11.63	□□□□□ -0.55
SAMM50-204	ENST00000493161	LCN2	P80188	198 aa		11.63	□□□□□ -0.55
SAMM50-204	ENST00000493161	FADD	Q13158	208 aa		11.63	□□□□□ -0.55
SAMM50-204	ENST00000493161	PCGF3	Q3KNV8	242 aa		11.63	□□□□□ -0.55
SAMM50-204	ENST00000493161	SPRN	Q5BIV9	151 aa		11.63	□□□□□ -0.55
SAMM50-204	ENST00000493161	TNFAIP8L3	Q5GJ75	292 aa		11.63	□□□□□ -0.55
SAMM50-204	ENST00000493161	SLC35D2	Q76EJ3	337 aa		11.63	□□□□□ -0.55
SAMM50-204	ENST00000493161	SNX32	Q86XE0	403 aa		11.63	□□□□□ -0.55
SAMM50-204	ENST00000493161	TEX29	Q8N6K0	151 aa		11.63	□□□□□ -0.55
SAMM50-204	ENST00000493161	SIGLECL1	Q8N7X8	197 aa		11.63	□□□□□ -0.55
SAMM50-204	ENST00000493161	ANKRD42	Q8N9B4	389 aa		11.63	□□□□□ -0.55
SAMM50-204	ENST00000493161	OR4K5	Q8NGD3	323 aa		11.63	□□□□□ -0.55
SAMM50-204	ENST00000493161	OR5J2	Q8NH18	312 aa		11.63	□□□□□ -0.55
SAMM50-204	ENST00000493161	OR6X1	Q8NH79	312 aa		11.63	□□□□□ -0.55
SAMM50-204	ENST00000493161	ZNF519	Q8TB69	540 aa		11.63	□□□□□ -0.55
SAMM50-204	ENST00000493161	SNX33	Q8WV41	574 aa		11.63	□□□□□ -0.55
SAMM50-204	ENST00000493161	CENPH	Q9H3R5	247 aa		11.63	□□□□□ -0.55
SAMM50-204	ENST00000493161	RNF121	Q9H920	327 aa		11.63	□□□□□ -0.55
SAMM50-204	ENST00000493161	TMEM27	Q9HBJ8	222 aa		11.63	□□□□□ -0.55
SAMM50-204	ENST00000493161	CDH20	Q9HBT6	801 aa		11.63	□□□□□ -0.55
SAMM50-204	ENST00000493161	TCF7L2	Q9NQB0	619 aa		11.63	□□□□□ -0.55
SAMM50-204	ENST00000493161	NKIRAS2	Q9NYR9	191 aa		11.63	□□□□□ -0.55
SAMM50-204	ENST00000493161	TAS2R5	Q9NYW4	299 aa		11.63	□□□□□ -0.55
SAMM50-204	ENST00000493161	TES	Q9UGI8	421 aa	Known RBP	11.63	□□□□□ -0.55
SAMM50-204	ENST00000493161	TG	P01266	2768 aa		11.63	□□□□□ -0.55
SAMM50-204	ENST00000493161	CLDN25	C9JDP6	229 aa		11.62	□□□□□ -0.55
SAMM50-204	ENST00000493161	UBD	O15205	165 aa		11.62	□□□□□ -0.55
SAMM50-204	ENST00000493161	DHH	O43323	396 aa		11.62	□□□□□ -0.55
SAMM50-204	ENST00000493161	TPD52L2	O43399	206 aa	Known RBP	11.62	□□□□□ -0.55
SAMM50-204	ENST00000493161	ZFP36	P26651	326 aa	Known RBP	11.62	□□□□□ -0.55
SAMM50-204	ENST00000493161	AQP1	P29972	269 aa		11.62	□□□□□ -0.55
SAMM50-204	ENST00000493161	UCP2	P55851	309 aa		11.62	□□□□□ -0.55
SAMM50-204	ENST00000493161	RGS8	P57771	180 aa	Predicted RBP	11.62	□□□□□ -0.55
SAMM50-204	ENST00000493161	SELENOV	P59797	346 aa		11.62	□□□□□ -0.55
SAMM50-204	ENST00000493161	NCALD	P61601	193 aa		11.62	□□□□□ -0.55
SAMM50-204	ENST00000493161	CDK6	Q00534	326 aa		11.62	□□□□□ -0.55
SAMM50-204	ENST00000493161	DEFA6	Q01524	100 aa		11.62	□□□□□ -0.55
SAMM50-204	ENST00000493161	PDLIM3	Q53GG5	364 aa	Predicted RBP	11.62	□□□□□ -0.55
SAMM50-204	ENST00000493161	GCNT6	Q5T4J0	391 aa		11.62	□□□□□ -0.55
SAMM50-204	ENST00000493161	REEP3	Q6NUK4	255 aa		11.62	□□□□□ -0.55
SAMM50-204	ENST00000493161	SHISA2	Q6UWI4	295 aa		11.62	□□□□□ -0.55
SAMM50-204	ENST00000493161	LINC00114	Q6XXX2	140 aa		11.62	□□□□□ -0.55
SAMM50-204	ENST00000493161	LRRC17	Q8N6Y2	441 aa		11.62	□□□□□ -0.55
SAMM50-204	ENST00000493161	C11orf40	Q8WZ69	217 aa		11.62	□□□□□ -0.55
SAMM50-204	ENST00000493161	LRRC58	Q96CX6	371 aa		11.62	□□□□□ -0.55
SAMM50-204	ENST00000493161	C1orf147	Q96MC9	270 aa	Predicted RBP	11.62	□□□□□ -0.55
SAMM50-204	ENST00000493161	TMEM43	Q9BTV4	400 aa		11.62	□□□□□ -0.55
SAMM50-204	ENST00000493161	IKZF5	Q9H5V7	419 aa		11.62	□□□□□ -0.55
SAMM50-204	ENST00000493161	DECR2	Q9NUI1	292 aa		11.62	□□□□□ -0.55
SAMM50-204	ENST00000493161	DDX28	Q9NUL7	540 aa	Known RBP	11.62	□□□□□ -0.55
SAMM50-204	ENST00000493161	THAP1	Q9NVV9	213 aa		11.62	□□□□□ -0.55
SAMM50-204	ENST00000493161	SLCO1C1	Q9NYB5	712 aa		11.62	□□□□□ -0.55
SAMM50-204	ENST00000493161	SELENON	Q9NZV5	590 aa		11.62	□□□□□ -0.55
SAMM50-204	ENST00000493161	GPR160	Q9UJ42	338 aa		11.62	□□□□□ -0.55
SAMM50-204	ENST00000493161	SLC22A23	A1A5C7	686 aa		11.61	□□□□□ -0.55
SAMM50-204	ENST00000493161		M0R3H8	397 aa		11.61	□□□□□ -0.55
SAMM50-204	ENST00000493161	SPRY3	O43610	288 aa		11.61	□□□□□ -0.55
SAMM50-204	ENST00000493161	LYPD3	O95274	346 aa		11.61	□□□□□ -0.55
SAMM50-204	ENST00000493161	SNAP29	O95721	258 aa		11.61	□□□□□ -0.55
SAMM50-204	ENST00000493161	CH25H	O95992	272 aa		11.61	□□□□□ -0.55
SAMM50-204	ENST00000493161	MT-ATP6	P00846	226 aa		11.61	□□□□□ -0.55
SAMM50-204	ENST00000493161	IGHV1-46	P01743	117 aa		11.61	□□□□□ -0.55
SAMM50-204	ENST00000493161	THY1	P04216	161 aa		11.61	□□□□□ -0.55
SAMM50-204	ENST00000493161	QDPR	P09417	244 aa		11.61	□□□□□ -0.55
SAMM50-204	ENST00000493161	PGA4	P0DJD7	388 aa		11.61	□□□□□ -0.55
SAMM50-204	ENST00000493161	PGA3	P0DJD8	388 aa		11.61	□□□□□ -0.55
SAMM50-204	ENST00000493161	MPV17	P39210	176 aa		11.61	□□□□□ -0.55
SAMM50-204	ENST00000493161	TEK	Q02763	1124 aa		11.61	□□□□□ -0.55
SAMM50-204	ENST00000493161	TBC1D28	Q2M2D7	210 aa		11.61	□□□□□ -0.55
SAMM50-204	ENST00000493161	TUSC1	Q2TAM9	212 aa		11.61	□□□□□ -0.55
SAMM50-204	ENST00000493161	HFE	Q30201	348 aa		11.61	□□□□□ -0.55
SAMM50-204	ENST00000493161	MMEL1	Q495T6	779 aa		11.61	□□□□□ -0.55
SAMM50-204	ENST00000493161	SPATA46	Q5T0L3	261 aa		11.61	□□□□□ -0.55
SAMM50-204	ENST00000493161	HHAT	Q5VTY9	493 aa		11.61	□□□□□ -0.55
SAMM50-204	ENST00000493161	TMEM53	Q6P2H8	277 aa		11.61	□□□□□ -0.55
SAMM50-204	ENST00000493161	BCL6B	Q8N143	479 aa	Predicted RBP	11.61	□□□□□ -0.55
SAMM50-204	ENST00000493161	CPEB3	Q8NE35	698 aa	Known RBP	11.61	□□□□□ -0.55
SAMM50-204	ENST00000493161	CCL17	Q92583	94 aa		11.61	□□□□□ -0.55
SAMM50-204	ENST00000493161	ZNF566	Q969W8	418 aa		11.61	□□□□□ -0.55
SAMM50-204	ENST00000493161	GAL3ST1	Q99999	423 aa		11.61	□□□□□ -0.55
SAMM50-204	ENST00000493161	RAD21L1	Q9H4I0	556 aa		11.61	□□□□□ -0.55
SAMM50-204	ENST00000493161	SAP30L	Q9HAJ7	183 aa		11.61	□□□□□ -0.55
SAMM50-204	ENST00000493161	MMP26	Q9NRE1	261 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms