RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 GTPBP3Q969Y2 492 aaKnown RBP11.07□□□□□ -0.64
SEC61A1-206ENST00000491668 ZNF837Q96EG3 531 aaPredicted RBP11.07□□□□□ -0.64
SEC61A1-206ENST00000491668 OXGR1Q96P68 337 aa11.07□□□□□ -0.64
SEC61A1-206ENST00000491668 MOGAT1Q96PD6 335 aa11.07□□□□□ -0.64
SEC61A1-206ENST00000491668 DHRS9Q9BPW9 319 aa11.07□□□□□ -0.64
SEC61A1-206ENST00000491668 FKRPQ9H9S5 495 aa11.07□□□□□ -0.64
SEC61A1-206ENST00000491668 MEPEQ9NQ76 525 aaPredicted RBP11.07□□□□□ -0.64
SEC61A1-206ENST00000491668 MGAT4BQ9UQ53 548 aa11.07□□□□□ -0.64
SEC61A1-206ENST00000491668 AMDHD2Q9Y303 409 aa11.07□□□□□ -0.64
SEC61A1-206ENST00000491668 CORINQ9Y5Q5 1042 aa11.07□□□□□ -0.64
SEC61A1-206ENST00000491668 ABCA1O95477 2261 aa11.07□□□□□ -0.64
SEC61A1-206ENST00000491668 DNHD1Q96M86 4753 aa11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 MXRA5Q9NR99 2828 aa11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 IGHV1-18A0A0C4DH31 117 aa11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 LOC102725191A0A1B0GVB3 256 aa11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 EFCAB9A8MZ26 197 aa11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 RNF223E7ERA6 249 aa11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 LRRN3E7EW58 273 aa11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 ATP6V1G2-DDX39BF2Z307 99 aa11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 MS4A18H0YCH9 400 aa11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 BGLAPP02818 100 aa11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 HLA-DOBP13765 273 aa11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 ZNF23P17027 643 aa11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 FUT1P19526 365 aa11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 GPR4P46093 362 aa11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 HMGA2P52926 109 aa11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 CLDN17P56750 224 aa11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 PRPS1P60891 318 aa11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 TUBA1BP68363 451 aa11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 TUBA4AP68366 448 aa11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 ELF3P78545 371 aaPredicted RBP11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 TGFBR3Q03167 851 aa11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 PRKCDQ05655 676 aa11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 PMS2P3Q13401 168 aa11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 LAPTM4AQ15012 233 aa11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 SEC23BQ15437 767 aa11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 ZNF74Q16587 644 aa11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 MS4A18Q3C1V0 323 aa11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 PHYHD1Q5SRE7 291 aa11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 TUBA1AQ71U36 451 aa11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 NANOGNBQ7Z5D8 188 aa11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 TMEM123Q8N131 208 aa11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 ICA1LQ8NDH6 482 aa11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 GIPC3Q8TF64 312 aa11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 HTRA1Q92743 480 aa11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 TRMT61AQ96FX7 289 aaKnown RBP11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 FAM46AQ96IP4 442 aaKnown RBP11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 CACNG6Q9BXT2 260 aa11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 LINC00470Q9BZP3 86 aa11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 SEMA6AQ9H2E6 1030 aa11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 SEC61A2Q9H9S3 476 aa11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 ZNF556Q9HAH1 456 aa11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 C20orf141Q9NUB4 165 aa11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 VNN3Q9NY84 501 aa11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 PDP1Q9P0J1 537 aaPredicted RBP11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 KIF17Q9P2E2 1029 aa11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 ZNF229Q9UJW7 825 aa11.06□□□□□ -0.64
SEC61A1-206ENST00000491668 A0A096LNT2 108 aa11.05□□□□□ -0.64
SEC61A1-206ENST00000491668 A0A096LPE4 126 aa11.05□□□□□ -0.64
SEC61A1-206ENST00000491668 A0A1W2PPZ6 126 aa11.05□□□□□ -0.64
SEC61A1-206ENST00000491668 ZNF503-AS2A6NEH8 195 aa11.05□□□□□ -0.64
SEC61A1-206ENST00000491668 FAM171A2A8MVW0 826 aa11.05□□□□□ -0.64
SEC61A1-206ENST00000491668 ZNF587BE7ETH6 402 aa11.05□□□□□ -0.64
SEC61A1-206ENST00000491668 BLOC1S5-TXNDC5H3BN57 136 aa11.05□□□□□ -0.64
SEC61A1-206ENST00000491668 H3BNX3 289 aa11.05□□□□□ -0.64
SEC61A1-206ENST00000491668 IGF2P01344 180 aa11.05□□□□□ -0.64
SEC61A1-206ENST00000491668 AHCYP23526 432 aa11.05□□□□□ -0.64
SEC61A1-206ENST00000491668 LSM11P83369 360 aaKnown RBP eCLIP11.05□□□□□ -0.64
SEC61A1-206ENST00000491668 ROR2Q01974 943 aaKnown RBP11.05□□□□□ -0.64
SEC61A1-206ENST00000491668 C1DQ13901 141 aaKnown RBP11.05□□□□□ -0.64
SEC61A1-206ENST00000491668 RCN1Q15293 331 aa11.05□□□□□ -0.64
SEC61A1-206ENST00000491668 ETFDHQ16134 617 aa11.05□□□□□ -0.64
SEC61A1-206ENST00000491668 MICAQ29983 383 aa11.05□□□□□ -0.64
SEC61A1-206ENST00000491668 MST1LQ2TV78 715 aa11.05□□□□□ -0.64
SEC61A1-206ENST00000491668 ARFGEF3Q5TH69 2177 aa11.05□□□□□ -0.64
SEC61A1-206ENST00000491668 AGAP6Q5VW22 663 aa11.05□□□□□ -0.64
SEC61A1-206ENST00000491668 H1FNTQ75WM6 255 aaPredicted RBP11.05□□□□□ -0.64
SEC61A1-206ENST00000491668 OAFQ86UD1 273 aa11.05□□□□□ -0.64
SEC61A1-206ENST00000491668 MYPOPQ86VE0 399 aaPredicted RBP11.05□□□□□ -0.64
SEC61A1-206ENST00000491668 MEX3DQ86XN8 651 aaKnown RBP11.05□□□□□ -0.64
SEC61A1-206ENST00000491668 ZDHHC13Q8IUH4 622 aa11.05□□□□□ -0.64
SEC61A1-206ENST00000491668 ATG16L2Q8NAA4 619 aa11.05□□□□□ -0.64
SEC61A1-206ENST00000491668 ADPRHL1Q8NDY3 354 aa11.05□□□□□ -0.64
SEC61A1-206ENST00000491668 OR10G2Q8NGC3 310 aa11.05□□□□□ -0.64
SEC61A1-206ENST00000491668 OR9Q2Q8NGE9 314 aa11.05□□□□□ -0.64
SEC61A1-206ENST00000491668 OR4C15Q8NGM1 316 aa11.05□□□□□ -0.64
SEC61A1-206ENST00000491668 OR5J2Q8NH18 312 aa11.05□□□□□ -0.64
SEC61A1-206ENST00000491668 GNPDA2Q8TDQ7 276 aa11.05□□□□□ -0.64
SEC61A1-206ENST00000491668 CENPNQ96H22 339 aaPredicted RBP11.05□□□□□ -0.64
SEC61A1-206ENST00000491668 OR2M2Q96R28 347 aa11.05□□□□□ -0.64
SEC61A1-206ENST00000491668 PKP2Q99959 881 aa11.05□□□□□ -0.64
SEC61A1-206ENST00000491668 NDEL1Q9GZM8 345 aa11.05□□□□□ -0.64
SEC61A1-206ENST00000491668 CBLN4Q9NTU7 201 aa11.05□□□□□ -0.64
SEC61A1-206ENST00000491668 FAIMQ9NVQ4 179 aa11.05□□□□□ -0.64
SEC61A1-206ENST00000491668 MOKQ9UQ07 419 aa11.05□□□□□ -0.64
SEC61A1-206ENST00000491668 RCE1Q9Y256 329 aa11.05□□□□□ -0.64
SEC61A1-206ENST00000491668 COL6A5A8TX70 2615 aa11.05□□□□□ -0.64
SEC61A1-206ENST00000491668 ARPC4-TTLL3A0A0A6YYG9 625 aa11.04□□□□□ -0.64
SEC61A1-206ENST00000491668 INAFM1C9JVW0 142 aa11.04□□□□□ -0.64
SEC61A1-206ENST00000491668 C11orf98E9PRG8 122 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms