RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 CENPAP49450 140 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 RAC1P63000 192 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 HSF1Q00613 529 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 HSF2Q03933 536 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 SRSF1Q07955 248 aaKnown RBP eCLIP11.38□□□□□ -0.592e-8■■□□□ 13.2
NELFE-209ENST00000488426 FOXO1Q12778 655 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 EEF1A1P5Q5VTE0 462 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 GDPGP1Q6ZNW5 385 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 LINC00696Q6ZRV3 163 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 TMPPEQ6ZT21 453 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 PHC2Q8IXK0 858 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 GHDCQ8N2G8 530 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 OR2M7Q8NG81 312 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 ASB10Q8WXI3 467 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 GATAD2BQ8WXI9 593 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 TM9SF4Q92544 642 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 UFD1Q92890 307 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 RPL3LQ92901 407 aaKnown RBP11.38□□□□□ -0.59
NELFE-209ENST00000488426 MRPL48Q96GC5 212 aaKnown RBP11.38□□□□□ -0.59
NELFE-209ENST00000488426 OR2B2Q9GZK3 357 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 ZNF552Q9H707 407 aaPredicted RBP11.38□□□□□ -0.59
NELFE-209ENST00000488426 NPIPA1Q9UND3 350 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 LOC102725191A0A1B0GVB3 256 aa11.37□□□□□ -0.59
NELFE-209ENST00000488426 A0A1W2PNR3 127 aa11.37□□□□□ -0.59
NELFE-209ENST00000488426 SULT2B1O00204 365 aa11.37□□□□□ -0.59
NELFE-209ENST00000488426 PSMA1P25786 263 aaKnown RBP11.37□□□□□ -0.59
NELFE-209ENST00000488426 PYCR1P32322 319 aa11.37□□□□□ -0.59
NELFE-209ENST00000488426 P2RY4P51582 365 aa11.37□□□□□ -0.59
NELFE-209ENST00000488426 BLVRAP53004 296 aa11.37□□□□□ -0.59
NELFE-209ENST00000488426 B3GALT5-AS1P59052 145 aa11.37□□□□□ -0.59
NELFE-209ENST00000488426 GPR85P60893 370 aa11.37□□□□□ -0.59
NELFE-209ENST00000488426 VBP1P61758 197 aa11.37□□□□□ -0.59
NELFE-209ENST00000488426 NCS1P62166 190 aa11.37□□□□□ -0.59
NELFE-209ENST00000488426 ACTA2P62736 377 aa11.37□□□□□ -0.59
NELFE-209ENST00000488426 ACTG2P63267 376 aa11.37□□□□□ -0.59
NELFE-209ENST00000488426 DBPQ10586 325 aaPredicted RBP11.37□□□□□ -0.59
NELFE-209ENST00000488426 MFAP5Q13361 173 aa11.37□□□□□ -0.59
NELFE-209ENST00000488426 TOMM20Q15388 145 aa11.37□□□□□ -0.59
NELFE-209ENST00000488426 HDDC2Q7Z4H3 204 aa11.37□□□□□ -0.59
NELFE-209ENST00000488426 ZBTB46Q86UZ6 589 aa11.37□□□□□ -0.59
NELFE-209ENST00000488426 SLC35F2Q8IXU6 374 aa11.37□□□□□ -0.59
NELFE-209ENST00000488426 OR51L1Q8NGJ5 315 aa11.37□□□□□ -0.59
NELFE-209ENST00000488426 OR14L1PQ8NHC6 308 aa11.37□□□□□ -0.59
NELFE-209ENST00000488426 SPRYD4Q8WW59 207 aaPredicted RBP11.37□□□□□ -0.59
NELFE-209ENST00000488426 ZNRF4Q8WWF5 429 aa11.37□□□□□ -0.59
NELFE-209ENST00000488426 RELTQ969Z4 430 aa11.37□□□□□ -0.59
NELFE-209ENST00000488426 TBX5Q99593 518 aa11.37□□□□□ -0.59
NELFE-209ENST00000488426 OR51E2Q9H255 320 aa11.37□□□□□ -0.59
NELFE-209ENST00000488426 SYT4Q9H2B2 425 aa11.37□□□□□ -0.59
NELFE-209ENST00000488426 B4GALT7Q9UBV7 327 aa11.37□□□□□ -0.59
NELFE-209ENST00000488426 KLF13Q9Y2Y9 288 aaPredicted RBP11.37□□□□□ -0.59
NELFE-209ENST00000488426 CSAG2Q9Y5P2 127 aa11.37□□□□□ -0.59
NELFE-209ENST00000488426 A0A1W2PQL4 384 aaPredicted RBP11.36□□□□□ -0.59
NELFE-209ENST00000488426 OR5H15A6NDH6 313 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 AQP7P3A6NL99 342 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 H7C1C5 153 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 LINC01387J3KSC0 135 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 DNPH1O43598 174 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 EIF1BO60739 113 aaKnown RBP11.36□□□□□ -0.59
NELFE-209ENST00000488426 F10P00742 488 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 TFP02787 698 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 MT-ND5P03915 603 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 HLA-DOBP13765 273 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 IFNGR1P15260 489 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 ZNF182P17025 639 aaPredicted RBP11.36□□□□□ -0.59
NELFE-209ENST00000488426 UGT2B10P36537 528 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 CD79BP40259 229 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 LSM3P62310 102 aaKnown RBP11.36□□□□□ -0.59
NELFE-209ENST00000488426 LCN6P62502 163 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 CSNK2A1P68400 391 aaPredicted RBP11.36□□□□□ -0.59
NELFE-209ENST00000488426 POU3F1Q03052 451 aaPredicted RBP11.36□□□□□ -0.59
NELFE-209ENST00000488426 ZNF85Q03923 595 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 LIPKQ5VXJ0 399 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 SLC35D2Q76EJ3 337 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 SLC16A9Q7RTY1 509 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 PM20D2Q8IYS1 436 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 OR6V1Q8N148 313 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 MDS2Q8NDY4 140 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 FAM83FQ8NEG4 500 aaPredicted RBP11.36□□□□□ -0.59
NELFE-209ENST00000488426 KBTBD8Q8NFY9 601 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 TSSK2Q96PF2 358 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 MNTQ99583 582 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 SMAD5Q99717 465 aaKnown RBP11.36□□□□□ -0.59
NELFE-209ENST00000488426 TIMP4Q99727 224 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 SRA1Q9HD15 236 aaKnown RBP11.36□□□□□ -0.59
NELFE-209ENST00000488426 B3GAT1Q9P2W7 334 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 PAIP2BQ9ULR5 123 aaKnown RBP11.36□□□□□ -0.59
NELFE-209ENST00000488426 STUB1Q9UNE7 303 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 NCKAP5O14513 1909 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 SLC22A23A1A5C7 686 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 PINLYPA6NC86 204 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 DCTN6O00399 190 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 OPN1LWP04000 364 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 RFPL3SP0C7P2 107 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 GDF1P27539 372 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 CRABP1P29762 137 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 NAA10P41227 235 aaPredicted RBP11.36□□□□□ -0.59
NELFE-209ENST00000488426 TAS2R43P59537 309 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 TUBA1BP68363 451 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 GPR50Q13585 617 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms