RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 RASD1Q9Y272 281 aa12.56□□□□□ -0.4
CLK3-204ENST00000483723 ALPK2Q86TB3 2170 aa12.56□□□□□ -0.4
CLK3-204ENST00000483723 A0A075B6Q4 140 aa12.55□□□□□ -0.4
CLK3-204ENST00000483723 GJE1A6NN92 205 aa12.55□□□□□ -0.4
CLK3-204ENST00000483723 PRR32B1ATL7 298 aa12.55□□□□□ -0.4
CLK3-204ENST00000483723 GABRPO00591 440 aa12.55□□□□□ -0.4
CLK3-204ENST00000483723 MAGEB4O15481 346 aaPredicted RBP12.55□□□□□ -0.4
CLK3-204ENST00000483723 EIF1BO60739 113 aaKnown RBP12.55□□□□□ -0.4
CLK3-204ENST00000483723 OPRL1P41146 370 aa12.55□□□□□ -0.4
CLK3-204ENST00000483723 TGM4P49221 684 aa12.55□□□□□ -0.4
CLK3-204ENST00000483723 RRADP55042 308 aa12.55□□□□□ -0.4
CLK3-204ENST00000483723 GPR85P60893 370 aa12.55□□□□□ -0.4
CLK3-204ENST00000483723 SIRPAP78324 504 aa12.55□□□□□ -0.4
CLK3-204ENST00000483723 OR1C1Q15619 314 aa12.55□□□□□ -0.4
CLK3-204ENST00000483723 ETFDHQ16134 617 aa12.55□□□□□ -0.4
CLK3-204ENST00000483723 TMEM225Q6GV28 225 aa12.55□□□□□ -0.4
CLK3-204ENST00000483723 C22orf42Q6IC83 251 aa12.55□□□□□ -0.4
CLK3-204ENST00000483723 RPL22L1Q6P5R6 122 aaKnown RBP12.55□□□□□ -0.4
CLK3-204ENST00000483723 PLEKHG7Q6ZR37 379 aa12.55□□□□□ -0.4
CLK3-204ENST00000483723 MDS2Q8NDY4 140 aa12.55□□□□□ -0.4
CLK3-204ENST00000483723 DCLRE1CQ96SD1 692 aaKnown RBP12.55□□□□□ -0.4
CLK3-204ENST00000483723 RNF32Q9H0A6 362 aa12.55□□□□□ -0.4
CLK3-204ENST00000483723 CCDC86Q9H6F5 360 aaKnown RBP12.55□□□□□ -0.4
CLK3-204ENST00000483723 AKIP1Q9NQ31 210 aa12.55□□□□□ -0.4
CLK3-204ENST00000483723 MED29Q9NX70 200 aa12.55□□□□□ -0.4
CLK3-204ENST00000483723 POLHQ9Y253 713 aa12.55□□□□□ -0.4
CLK3-204ENST00000483723 KLHDC2Q9Y2U9 406 aa12.55□□□□□ -0.4
CLK3-204ENST00000483723 TMEM14AQ9Y6G1 99 aa12.55□□□□□ -0.4
CLK3-204ENST00000483723 PHYHO14832 338 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 RAMP1O60894 148 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 SC5DO75845 299 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 SULT1C4O75897 302 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 ABHD16AO95870 558 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 F10P00742 488 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 BIDP55957 195 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 CSNK2A1P68400 391 aaPredicted RBP12.54□□□□□ -0.4
CLK3-204ENST00000483723 EGR3Q06889 387 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 DCTN2Q13561 401 aaKnown RBP12.54□□□□□ -0.4
CLK3-204ENST00000483723 CDK5R1Q15078 307 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 POU4F3Q15319 338 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 ATP1A1-AS1Q5TC04 95 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 DNM1P34Q6PK57 102 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 YRDCQ86U90 279 aaKnown RBP12.54□□□□□ -0.4
CLK3-204ENST00000483723 OR6X1Q8NH79 312 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 OTOSQ8NHW6 89 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 HAVCR2Q8TDQ0 301 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 TMED9Q9BVK6 235 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 HDHD5Q9BXW7 423 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 PLA2G3Q9NZ20 509 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 ARGFXA6NJG6 315 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 LINC01387J3KSC0 135 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 ZNF593O00488 134 aaPredicted RBP12.54□□□□□ -0.4
CLK3-204ENST00000483723 NKX2-8O15522 239 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 KHDRBS3O75525 346 aaKnown RBP12.54□□□□□ -0.4
CLK3-204ENST00000483723 CDRT1O95170 752 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 VAMP5O95183 116 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 GPANK1O95872 356 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 HPNP05981 417 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 PSKH1P11801 424 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 KLK2P20151 261 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 SOX6P35712 828 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 GFRA1P56159 465 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 MRPL28Q13084 256 aaKnown RBP12.54□□□□□ -0.4
CLK3-204ENST00000483723 PCK2Q16822 640 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 TEX30Q5JUR7 227 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 ARL9Q6T311 187 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 LINC00696Q6ZRV3 163 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 DPY19L4Q7Z388 723 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 HDDC2Q7Z4H3 204 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 VASH2Q86V25 355 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 SULF2Q8IWU5 870 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 MS4A15Q8N5U1 240 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 OR6N2Q8NGY6 317 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 OR14L1PQ8NHC6 308 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 ABHD4Q8TB40 342 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 S100ZQ8WXG8 99 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 HAS2Q92819 552 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 SLC25A44Q96H78 314 aaPredicted RBP12.54□□□□□ -0.4
CLK3-204ENST00000483723 ADGRG7Q96K78 797 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 NAA11Q9BSU3 229 aaPredicted RBP12.54□□□□□ -0.4
CLK3-204ENST00000483723 BARHL1Q9BZE3 327 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 RERGLQ9H628 205 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 KLHL9Q9P2J3 617 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 MRM2Q9UI43 246 aaKnown RBP12.54□□□□□ -0.4
CLK3-204ENST00000483723 COA3Q9Y2R0 106 aaPredicted RBP12.54□□□□□ -0.4
CLK3-204ENST00000483723 GRIP1Q9Y3R0 1128 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 KIAA1549Q9HCM3 1950 aa12.54□□□□□ -0.4
CLK3-204ENST00000483723 IGKV1D-43A0A0B4J1Z2 117 aa12.53□□□□□ -0.4
CLK3-204ENST00000483723 SLC35F4A4IF30 521 aa12.53□□□□□ -0.4
CLK3-204ENST00000483723 OR5H15A6NDH6 313 aa12.53□□□□□ -0.4
CLK3-204ENST00000483723 HSPB2A8KAH6 182 aa12.53□□□□□ -0.4
CLK3-204ENST00000483723 CLDN25C9JDP6 229 aa12.53□□□□□ -0.4
CLK3-204ENST00000483723 UPK3AO75631 287 aa12.53□□□□□ -0.4
CLK3-204ENST00000483723 RGS9O75916 674 aaPredicted RBP12.53□□□□□ -0.4
CLK3-204ENST00000483723 SP1P08047 785 aa12.53□□□□□ -0.4
CLK3-204ENST00000483723 TACSTD2P09758 323 aa12.53□□□□□ -0.4
CLK3-204ENST00000483723 PGA4P0DJD7 388 aa12.53□□□□□ -0.4
CLK3-204ENST00000483723 PGA3P0DJD8 388 aa12.53□□□□□ -0.4
CLK3-204ENST00000483723 ZNF43P17038 809 aa12.53□□□□□ -0.4
CLK3-204ENST00000483723 WT1P19544 449 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms