RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 GTF3AQ92664 365 aaKnown RBP6.29□□□□□ -1.4
CSDE1-206ENST00000483030 DVL3Q92997 716 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-206ENST00000483030 MAL2Q969L2 176 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 SLC35B4Q969S0 331 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 ZBTB9Q96C00 473 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 SLC41A3Q96GZ6 507 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 MOGAT1Q96PD6 335 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 DUX5Q96PT3 197 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 C1QTNF5Q9BXJ0 243 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 ASPNQ9BXN1 380 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 RSPO3Q9BXY4 272 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-206ENST00000483030 KRTAP4-6Q9BYQ5 205 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 WDR55Q9H6Y2 383 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-206ENST00000483030 C12orf10Q9HB07 376 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 NTN4Q9HB63 628 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 BCL2L10Q9HD36 194 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 DECR2Q9NUI1 292 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 THUMPD1Q9NXG2 353 aaKnown RBP6.29□□□□□ -1.4
CSDE1-206ENST00000483030 ETAA1Q9NY74 926 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 SLCO1C1Q9NYB5 712 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 WIPI2Q9Y4P8 454 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 CORINQ9Y5Q5 1042 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 CACNG2Q9Y698 323 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 IGLV3-9A0A075B6K5 115 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 TMEM238LA0A1B0GVL6 79 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 SLC22A23A1A5C7 686 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 FAM25EA8MYX2 175 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 LRRN3E7EW58 273 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 C11orf98E9PRG8 122 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 PLPP3O14495 311 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 TPST1O60507 370 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 SLC22A3O75751 556 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 FSHBP01225 129 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 BGLAPP02818 100 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 IL6P05231 212 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 ZCCHC18P0CG32 403 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 OR8G3PP0DMU2 310 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 ZNF250P15622 560 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 EPHA3P29320 983 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 CSNK1A1P48729 337 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 UCP2P55851 309 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 BIDP55957 195 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 KLF3P57682 345 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-206ENST00000483030 LCN2P80188 198 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 PUDPQ08623 228 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 RBBP4Q09028 425 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 RGNQ15493 299 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 HFEQ30201 348 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 MMEL1Q495T6 779 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 PDCD4Q53EL6 469 aaKnown RBP6.28□□□□□ -1.4
CSDE1-206ENST00000483030 C6orf10Q5SRN2 563 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 ULK3Q6PHR2 472 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 LRFN4Q6PJG9 635 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 WDR88Q6ZMY6 472 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 VASH1Q7L8A9 365 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-206ENST00000483030 PXKQ7Z7A4 578 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 COMTD1Q86VU5 262 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 TREML1Q86YW5 311 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 KIRREL3Q8IZU9 778 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 SLC22A24Q8N4F4 322 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 SIGLECL1Q8N7X8 197 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 GOLGA6L1Q8N7Z2 621 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 SCAIQ8N9R8 606 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 ICA1LQ8NDH6 482 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 SLC30A7Q8NEW0 376 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 OR6S1Q8NH40 331 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 ZNF519Q8TB69 540 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.28□□□□□ -1.4
CSDE1-206ENST00000483030 CCL17Q92583 94 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 RAB1CQ92928 201 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 VPS33AQ96AX1 596 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 SLC47A1Q96FL8 570 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 TIMD4Q96H15 378 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 ITCHQ96J02 903 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 EPYCQ99645 322 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 SH3GL3Q99963 347 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 RNF121Q9H920 327 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 CDH20Q9HBT6 801 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 DCAF16Q9NXF7 216 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 MRPL39Q9NYK5 338 aaKnown RBP6.28□□□□□ -1.4
CSDE1-206ENST00000483030 NKIRAS2Q9NYR9 191 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 SELENONQ9NZV5 590 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 RABL2AQ9UBK7 228 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-206ENST00000483030 HAO1Q9UJM8 370 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 FBXL3Q9UKT7 428 aa6.28□□□□□ -1.4
CSDE1-206ENST00000483030 C5orf58C9J3I9 102 aa6.27□□□□□ -1.41
CSDE1-206ENST00000483030 CLDN25C9JDP6 229 aa6.27□□□□□ -1.41
CSDE1-206ENST00000483030 CLIC1O00299 241 aa6.27□□□□□ -1.41
CSDE1-206ENST00000483030 SPRY3O43610 288 aa6.27□□□□□ -1.41
CSDE1-206ENST00000483030 E2F6O75461 281 aa6.27□□□□□ -1.41
CSDE1-206ENST00000483030 OR6A2O95222 327 aa6.27□□□□□ -1.41
CSDE1-206ENST00000483030 ADORA3P0DMS8 318 aa6.27□□□□□ -1.41
CSDE1-206ENST00000483030 ETS2P15036 469 aa6.27□□□□□ -1.41
CSDE1-206ENST00000483030 MAKP20794 623 aa6.27□□□□□ -1.41
CSDE1-206ENST00000483030 DRD4P21917 467 aa6.27□□□□□ -1.41
CSDE1-206ENST00000483030 GATA3P23771 443 aa6.27□□□□□ -1.41
CSDE1-206ENST00000483030 PRTN3P24158 256 aa6.27□□□□□ -1.41
CSDE1-206ENST00000483030 ZFP36P26651 326 aaKnown RBP6.27□□□□□ -1.41
CSDE1-206ENST00000483030 PRKAR1BP31321 381 aa6.27□□□□□ -1.41
CSDE1-206ENST00000483030 GLO1Q04760 184 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms