RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 KRT80Q6KB66 452 aa10.36□□□□□ -0.75
PDCD11-204ENST00000478543 PLBD1Q6P4A8 553 aa10.36□□□□□ -0.75
PDCD11-204ENST00000478543 CXXC5Q7LFL8 322 aaKnown RBP10.36□□□□□ -0.75
PDCD11-204ENST00000478543 AAED1Q7RTV5 226 aa10.36□□□□□ -0.75
PDCD11-204ENST00000478543 THAP5Q7Z6K1 395 aa10.36□□□□□ -0.75
PDCD11-204ENST00000478543 GTF2IRD2Q86UP8 949 aa10.36□□□□□ -0.75
PDCD11-204ENST00000478543 CPOQ8IVL8 374 aa10.36□□□□□ -0.75
PDCD11-204ENST00000478543 NOXO1Q8NFA2 376 aa10.36□□□□□ -0.75
PDCD11-204ENST00000478543 OR9Q1Q8NGQ5 310 aa10.36□□□□□ -0.75
PDCD11-204ENST00000478543 TMEM163Q8TC26 289 aa10.36□□□□□ -0.75
PDCD11-204ENST00000478543 INTS12Q96CB8 462 aaKnown RBP10.36□□□□□ -0.75
PDCD11-204ENST00000478543 OR2M2Q96R28 347 aa10.36□□□□□ -0.75
PDCD11-204ENST00000478543 TP63Q9H3D4 680 aaPredicted RBP10.36□□□□□ -0.75
PDCD11-204ENST00000478543 RERGLQ9H628 205 aa10.36□□□□□ -0.75
PDCD11-204ENST00000478543 RNF122Q9H9V4 155 aa10.36□□□□□ -0.75
PDCD11-204ENST00000478543 HINT3Q9NQE9 182 aaKnown RBP10.36□□□□□ -0.75
PDCD11-204ENST00000478543 DNAJC27Q9NZQ0 273 aa10.36□□□□□ -0.75
PDCD11-204ENST00000478543 EMC3Q9P0I2 261 aa10.36□□□□□ -0.75
PDCD11-204ENST00000478543 NOSIPQ9Y314 301 aaKnown RBP10.36□□□□□ -0.75
PDCD11-204ENST00000478543 PCDHGB5Q9Y5G0 923 aa10.36□□□□□ -0.75
PDCD11-204ENST00000478543 ANKHD1Q8IWZ3 2542 aaKnown RBP10.35□□□□□ -0.75
PDCD11-204ENST00000478543 TRGV8A0A0C4DH27 118 aa10.35□□□□□ -0.75
PDCD11-204ENST00000478543 OR6C68A6NDL8 312 aa10.35□□□□□ -0.75
PDCD11-204ENST00000478543 ZNF724A8MTY0 619 aa10.35□□□□□ -0.75
PDCD11-204ENST00000478543 PRR23D1E9PI22 279 aaPredicted RBP10.35□□□□□ -0.75
PDCD11-204ENST00000478543 GPR171O14626 319 aa10.35□□□□□ -0.75
PDCD11-204ENST00000478543 IGHG1P01857 330 aa10.35□□□□□ -0.75
PDCD11-204ENST00000478543 GYPBP06028 91 aa10.35□□□□□ -0.75
PDCD11-204ENST00000478543 YES1P07947 543 aa10.35□□□□□ -0.75
PDCD11-204ENST00000478543 STSP08842 583 aa10.35□□□□□ -0.75
PDCD11-204ENST00000478543 PRR23D2P0DMB1 279 aaPredicted RBP10.35□□□□□ -0.75
PDCD11-204ENST00000478543 PAICSP22234 425 aaKnown RBP10.35□□□□□ -0.75
PDCD11-204ENST00000478543 AGTR1P30556 359 aa10.35□□□□□ -0.75
PDCD11-204ENST00000478543 FMO3P31513 532 aa10.35□□□□□ -0.75
PDCD11-204ENST00000478543 NTF4P34130 210 aa10.35□□□□□ -0.75
PDCD11-204ENST00000478543 PER3P56645 1201 aa10.35□□□□□ -0.75
PDCD11-204ENST00000478543 ISL1P61371 349 aa10.35□□□□□ -0.75
PDCD11-204ENST00000478543 FMODQ06828 376 aa10.35□□□□□ -0.75
PDCD11-204ENST00000478543 LGALS3BPQ08380 585 aa10.35□□□□□ -0.75
PDCD11-204ENST00000478543 MED21Q13503 144 aa10.35□□□□□ -0.75
PDCD11-204ENST00000478543 TMEM201Q5SNT2 666 aa10.35□□□□□ -0.75
PDCD11-204ENST00000478543 ZNF362Q5T0B9 420 aaPredicted RBP10.35□□□□□ -0.75
PDCD11-204ENST00000478543 B3GNT6Q6ZMB0 384 aa10.35□□□□□ -0.75
PDCD11-204ENST00000478543 SEM1Q6ZVN7 128 aa10.35□□□□□ -0.75
PDCD11-204ENST00000478543 NCCRP1Q6ZVX7 275 aaPredicted RBP10.35□□□□□ -0.75
PDCD11-204ENST00000478543 NUFIP2Q7Z417 695 aaKnown RBP10.35□□□□□ -0.75
PDCD11-204ENST00000478543 HDDC2Q7Z4H3 204 aa10.35□□□□□ -0.75
PDCD11-204ENST00000478543 ADCK1Q86TW2 530 aa10.35□□□□□ -0.75
PDCD11-204ENST00000478543 NPEPL1Q8NDH3 523 aa10.35□□□□□ -0.75
PDCD11-204ENST00000478543 BBS1Q8NFJ9 593 aa10.35□□□□□ -0.75
PDCD11-204ENST00000478543 OR8J1Q8NGP2 316 aa10.35□□□□□ -0.75
PDCD11-204ENST00000478543 OR6N1Q8NGY5 312 aa10.35□□□□□ -0.75
PDCD11-204ENST00000478543 OR6X1Q8NH79 312 aa10.35□□□□□ -0.75
PDCD11-204ENST00000478543 RHOXF1Q8NHV9 184 aa10.35□□□□□ -0.75
PDCD11-204ENST00000478543 APH1BQ8WW43 257 aa10.35□□□□□ -0.75
PDCD11-204ENST00000478543 ZNF566Q969W8 418 aa10.35□□□□□ -0.75
PDCD11-204ENST00000478543 SLC25A44Q96H78 314 aaPredicted RBP10.35□□□□□ -0.75
PDCD11-204ENST00000478543 GMPPAQ96IJ6 420 aaPredicted RBP10.35□□□□□ -0.75
PDCD11-204ENST00000478543 LRR1Q96L50 414 aa10.35□□□□□ -0.75
PDCD11-204ENST00000478543 ADAD1Q96M93 576 aaKnown RBP10.35□□□□□ -0.75
PDCD11-204ENST00000478543 TSSK2Q96PF2 358 aa10.35□□□□□ -0.75
PDCD11-204ENST00000478543 TM9SF2Q99805 663 aa10.35□□□□□ -0.75
PDCD11-204ENST00000478543 HCAR1Q9BXC0 346 aa10.35□□□□□ -0.75
PDCD11-204ENST00000478543 SYT4Q9H2B2 425 aa10.35□□□□□ -0.75
PDCD11-204ENST00000478543 C12orf49Q9H741 205 aa10.35□□□□□ -0.75
PDCD11-204ENST00000478543 BCO1Q9HAY6 547 aa10.35□□□□□ -0.75
PDCD11-204ENST00000478543 RPRD1BQ9NQG5 326 aaKnown RBP10.35□□□□□ -0.75
PDCD11-204ENST00000478543 CLN6Q9NWW5 311 aa10.35□□□□□ -0.75
PDCD11-204ENST00000478543 UBAP1Q9NZ09 502 aa10.35□□□□□ -0.75
PDCD11-204ENST00000478543 SPG11Q96JI7 2443 aa10.35□□□□□ -0.75
PDCD11-204ENST00000478543 SLC22A23A1A5C7 686 aa10.34□□□□□ -0.75
PDCD11-204ENST00000478543 PRSS37A4D1T9 235 aa10.34□□□□□ -0.75
PDCD11-204ENST00000478543 MBD3L4A6NDZ8 208 aaPredicted RBP10.34□□□□□ -0.75
PDCD11-204ENST00000478543 MBD3L3A6NE82 208 aaPredicted RBP10.34□□□□□ -0.75
PDCD11-204ENST00000478543 MBD3L5A6NJ08 208 aaPredicted RBP10.34□□□□□ -0.75
PDCD11-204ENST00000478543 C19orf84I3L1E1 186 aa10.34□□□□□ -0.75
PDCD11-204ENST00000478543 MPZL2O60487 215 aa10.34□□□□□ -0.75
PDCD11-204ENST00000478543 SS18L1O75177 396 aaPredicted RBP10.34□□□□□ -0.75
PDCD11-204ENST00000478543 ENTPD6O75354 484 aa10.34□□□□□ -0.75
PDCD11-204ENST00000478543 SLC43A1O75387 559 aa10.34□□□□□ -0.75
PDCD11-204ENST00000478543 MRPL33O75394 65 aaKnown RBP10.34□□□□□ -0.75
PDCD11-204ENST00000478543 HOXD4P09016 255 aaPredicted RBP10.34□□□□□ -0.75
PDCD11-204ENST00000478543 PGA4P0DJD7 388 aa10.34□□□□□ -0.75
PDCD11-204ENST00000478543 PGA3P0DJD8 388 aa10.34□□□□□ -0.75
PDCD11-204ENST00000478543 CLUP10909 449 aa10.34□□□□□ -0.75
PDCD11-204ENST00000478543 GABRB1P18505 474 aa10.34□□□□□ -0.75
PDCD11-204ENST00000478543 EDNRAP25101 427 aa10.34□□□□□ -0.75
PDCD11-204ENST00000478543 CSNK1A1P48729 337 aa10.34□□□□□ -0.75
PDCD11-204ENST00000478543 NUDT6P53370 316 aa10.34□□□□□ -0.75
PDCD11-204ENST00000478543 CASP6P55212 293 aa10.34□□□□□ -0.75
PDCD11-204ENST00000478543 SNRPGP62308 76 aaKnown RBP10.34□□□□□ -0.75
PDCD11-204ENST00000478543 EFNB1P98172 346 aa10.34□□□□□ -0.75
PDCD11-204ENST00000478543 FOXF2Q12947 444 aa10.34□□□□□ -0.75
PDCD11-204ENST00000478543 CDK5R2Q13319 367 aa10.34□□□□□ -0.75
PDCD11-204ENST00000478543 CDSNQ15517 529 aa10.34□□□□□ -0.75
PDCD11-204ENST00000478543 SMN1Q16637 294 aaKnown RBP10.34□□□□□ -0.75
PDCD11-204ENST00000478543 KLHL12Q53G59 568 aa10.34□□□□□ -0.75
PDCD11-204ENST00000478543 OR2A2Q6IF42 318 aa10.34□□□□□ -0.75
PDCD11-204ENST00000478543 TMEM123Q8N131 208 aa10.34□□□□□ -0.75
PDCD11-204ENST00000478543 CNEP1R1Q8N9A8 125 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms