RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 TMEM54Q969K7 222 aa1.96□□□□□ -2.1
TARDBP-208ENST00000477447 SMIM10Q96HG1 83 aa1.96□□□□□ -2.1
TARDBP-208ENST00000477447 TSSK3Q96PN8 268 aa1.96□□□□□ -2.1
TARDBP-208ENST00000477447 GCOM2Q9BZD3 368 aaPredicted RBP1.96□□□□□ -2.1
TARDBP-208ENST00000477447 SUN2Q9UH99 717 aa1.96□□□□□ -2.1
TARDBP-208ENST00000477447 SLC7A8Q9UHI5 535 aa1.96□□□□□ -2.1
TARDBP-208ENST00000477447 SHPKQ9UHJ6 478 aa1.96□□□□□ -2.1
TARDBP-208ENST00000477447 TMCC3Q9ULS5 477 aa1.96□□□□□ -2.1
TARDBP-208ENST00000477447 MROH7-TTC4A0A0A0MT08 1334 aa1.95□□□□□ -2.1
TARDBP-208ENST00000477447 IGHV3-66A0A0C4DH42 116 aa1.95□□□□□ -2.1
TARDBP-208ENST00000477447 A0A1W2PPE3 182 aa1.95□□□□□ -2.1
TARDBP-208ENST00000477447 LRCOL1A6NCL2 159 aa1.95□□□□□ -2.1
TARDBP-208ENST00000477447 HIDE1A8MVS5 230 aa1.95□□□□□ -2.1
TARDBP-208ENST00000477447 PPP1R2P9O14990 202 aa1.95□□□□□ -2.1
TARDBP-208ENST00000477447 ENTPD5O75356 428 aa1.95□□□□□ -2.1
TARDBP-208ENST00000477447 CTDNEP1O95476 244 aa1.95□□□□□ -2.1
TARDBP-208ENST00000477447 TMEM50AO95807 157 aa1.95□□□□□ -2.1
TARDBP-208ENST00000477447 RETP07949 1114 aa1.95□□□□□ -2.1
TARDBP-208ENST00000477447 IGFBP3P17936 291 aaPredicted RBP1.95□□□□□ -2.1
TARDBP-208ENST00000477447 CYB561P49447 251 aa1.95□□□□□ -2.1
TARDBP-208ENST00000477447 FBXW4P57775 412 aa1.95□□□□□ -2.1
TARDBP-208ENST00000477447 PRPSAP1Q14558 356 aa1.95□□□□□ -2.1
TARDBP-208ENST00000477447 LINC00483Q53H64 154 aa1.95□□□□□ -2.1
TARDBP-208ENST00000477447 SLC25A48Q6ZT89 311 aaKnown RBP1.95□□□□□ -2.1
TARDBP-208ENST00000477447 NCCRP1Q6ZVX7 275 aaPredicted RBP1.95□□□□□ -2.1
TARDBP-208ENST00000477447 PEX26Q7Z412 305 aa1.95□□□□□ -2.1
TARDBP-208ENST00000477447 NBPF5PQ86XG9 351 aaPredicted RBP1.95□□□□□ -2.1
TARDBP-208ENST00000477447 EGFL6Q8IUX8 553 aa1.95□□□□□ -2.1
TARDBP-208ENST00000477447 TTC5Q8N0Z6 440 aa1.95□□□□□ -2.1
TARDBP-208ENST00000477447 STPG2Q8N412 459 aa1.95□□□□□ -2.1
TARDBP-208ENST00000477447 CEP112Q8N8E3 955 aa1.95□□□□□ -2.1
TARDBP-208ENST00000477447 OR4F6Q8NGB9 312 aa1.95□□□□□ -2.1
TARDBP-208ENST00000477447 WFIKKN1Q96NZ8 548 aa1.95□□□□□ -2.1
TARDBP-208ENST00000477447 SH3GL1Q99961 368 aa1.95□□□□□ -2.1
TARDBP-208ENST00000477447 RPF2Q9H7B2 306 aaKnown RBP1.95□□□□□ -2.1
TARDBP-208ENST00000477447 ZNF282Q9UDV7 671 aaPredicted RBP1.95□□□□□ -2.1
TARDBP-208ENST00000477447 IKZF2Q9UKS7 526 aa1.95□□□□□ -2.1
TARDBP-208ENST00000477447 KIAA1257Q9ULG3 409 aa1.95□□□□□ -2.1
TARDBP-208ENST00000477447 PIKFYVEQ9Y2I7 2098 aa1.95□□□□□ -2.1
TARDBP-208ENST00000477447 CEMIPQ8WUJ3 1361 aa1.95□□□□□ -2.1
TARDBP-208ENST00000477447 ATP10AO60312 1499 aa1.94□□□□□ -2.1
TARDBP-208ENST00000477447 IGHV5-51A0A0C4DH38 117 aa1.94□□□□□ -2.1
TARDBP-208ENST00000477447 A0A1W2PP18 115 aa1.94□□□□□ -2.1
TARDBP-208ENST00000477447 F6UB75 175 aa1.94□□□□□ -2.1
TARDBP-208ENST00000477447 B4GALT5O43286 388 aa1.94□□□□□ -2.1
TARDBP-208ENST00000477447 EIF3GO75821 320 aaKnown RBP eCLIP1.94□□□□□ -2.1
TARDBP-208ENST00000477447 SERPINA3P01011 423 aa1.94□□□□□ -2.1
TARDBP-208ENST00000477447 FABP3P05413 133 aa1.94□□□□□ -2.1
TARDBP-208ENST00000477447 MRPL3P09001 348 aaKnown RBP1.94□□□□□ -2.1
TARDBP-208ENST00000477447 TLX1NBP0CAT3 122 aa1.94□□□□□ -2.1
TARDBP-208ENST00000477447 CALM1P0DP23 149 aa1.94□□□□□ -2.1
TARDBP-208ENST00000477447 CALM2P0DP24 149 aa1.94□□□□□ -2.1
TARDBP-208ENST00000477447 CALM3P0DP25 149 aa1.94□□□□□ -2.1
TARDBP-208ENST00000477447 PRPS2P11908 318 aa1.94□□□□□ -2.1
TARDBP-208ENST00000477447 PGAM1P18669 254 aa1.94□□□□□ -2.1
TARDBP-208ENST00000477447 NCF2P19878 526 aaPredicted RBP1.94□□□□□ -2.1
TARDBP-208ENST00000477447 MX1P20591 662 aa1.94□□□□□ -2.1
TARDBP-208ENST00000477447 SERPINB5P36952 375 aa1.94□□□□□ -2.1
TARDBP-208ENST00000477447 CDKN1BP46527 198 aa1.94□□□□□ -2.1
TARDBP-208ENST00000477447 KCNJ2P63252 427 aa1.94□□□□□ -2.1
TARDBP-208ENST00000477447 PON3Q15166 354 aa1.94□□□□□ -2.1
TARDBP-208ENST00000477447 TGFBIQ15582 683 aa1.94□□□□□ -2.1
TARDBP-208ENST00000477447 UBE2SQ16763 222 aa1.94□□□□□ -2.1
TARDBP-208ENST00000477447 MAJINQ3KP22 176 aa1.94□□□□□ -2.1
TARDBP-208ENST00000477447 LY6G6FQ5SQ64 297 aa1.94□□□□□ -2.1
TARDBP-208ENST00000477447 HES5Q5TA89 166 aa1.94□□□□□ -2.1
TARDBP-208ENST00000477447 ZNF493Q6ZR52 646 aa1.94□□□□□ -2.1
TARDBP-208ENST00000477447 FAM92BQ6ZTR7 304 aa1.94□□□□□ -2.1
TARDBP-208ENST00000477447 TMEM179Q6ZVK1 233 aa1.94□□□□□ -2.1
TARDBP-208ENST00000477447 PGAM4Q8N0Y7 254 aa1.94□□□□□ -2.1
TARDBP-208ENST00000477447 OR10G4Q8NGN3 311 aa1.94□□□□□ -2.1
TARDBP-208ENST00000477447 SH3GL3Q99963 347 aa1.94□□□□□ -2.1
TARDBP-208ENST00000477447 NDFIP1Q9BT67 221 aa1.94□□□□□ -2.1
TARDBP-208ENST00000477447 MRPL37Q9BZE1 423 aaKnown RBP1.94□□□□□ -2.1
TARDBP-208ENST00000477447 NT5C3AQ9H0P0 336 aa1.94□□□□□ -2.1
TARDBP-208ENST00000477447 NTN4Q9HB63 628 aa1.94□□□□□ -2.1
TARDBP-208ENST00000477447 HYPKQ9NX55 129 aa1.94□□□□□ -2.1
TARDBP-208ENST00000477447 CTNNA3Q9UI47 895 aa1.94□□□□□ -2.1
TARDBP-208ENST00000477447 ZNF222Q9UK12 451 aa1.94□□□□□ -2.1
TARDBP-208ENST00000477447 YTHDF2Q9Y5A9 579 aaKnown RBP1.94□□□□□ -2.1
TARDBP-208ENST00000477447 CARMIL3Q8ND23 1372 aa1.94□□□□□ -2.1
TARDBP-208ENST00000477447 MN1Q10571 1320 aaPredicted RBP1.93□□□□□ -2.1
TARDBP-208ENST00000477447 IGKV6-21A0A0C4DH24 114 aa1.93□□□□□ -2.1
TARDBP-208ENST00000477447 FAM240BA0A1B0GVZ2 78 aa1.93□□□□□ -2.1
TARDBP-208ENST00000477447 A0A1W2PQ67 120 aa1.93□□□□□ -2.1
TARDBP-208ENST00000477447 TCP11X1B4DZS4 312 aa1.93□□□□□ -2.1
TARDBP-208ENST00000477447 DYNC1I1O14576 645 aa1.93□□□□□ -2.1
TARDBP-208ENST00000477447 FGGP02679 453 aa1.93□□□□□ -2.1
TARDBP-208ENST00000477447 SERPIND1P05546 499 aa1.93□□□□□ -2.1
TARDBP-208ENST00000477447 KITLGP21583 273 aa1.93□□□□□ -2.1
TARDBP-208ENST00000477447 IFNA8P32881 189 aa1.93□□□□□ -2.1
TARDBP-208ENST00000477447 HRH1P35367 487 aa1.93□□□□□ -2.1
TARDBP-208ENST00000477447 PMELP40967 661 aa1.93□□□□□ -2.1
TARDBP-208ENST00000477447 RFX3P48380 749 aa1.93□□□□□ -2.1
TARDBP-208ENST00000477447 NUTF2P61970 127 aaKnown RBP1.93□□□□□ -2.1
TARDBP-208ENST00000477447 RPL23AP62750 156 aaKnown RBP1.93□□□□□ -2.1
TARDBP-208ENST00000477447 RAP1AP62834 184 aa1.93□□□□□ -2.1
TARDBP-208ENST00000477447 VAX1Q5SQQ9 334 aa1.93□□□□□ -2.1
TARDBP-208ENST00000477447 NANOGP8Q6NSW7 305 aa1.93□□□□□ -2.1
TARDBP-208ENST00000477447 Q6ZR03 302 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms