RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 MCHR2Q969V1 340 aa12.39□□□□□ -0.43
VAMP4-203ENST00000474047 RBP7Q96R05 134 aa12.39□□□□□ -0.43
VAMP4-203ENST00000474047 ZNF347Q96SE7 839 aa12.39□□□□□ -0.43
VAMP4-203ENST00000474047 KATNB1Q9BVA0 655 aa12.39□□□□□ -0.43
VAMP4-203ENST00000474047 CSMD1Q96PZ7 3565 aa12.39□□□□□ -0.43
VAMP4-203ENST00000474047 ARID1AO14497 2285 aa12.38□□□□□ -0.43
VAMP4-203ENST00000474047 TSPAN19P0C672 248 aa12.38□□□□□ -0.43
VAMP4-203ENST00000474047 CECR9P0C854 216 aa12.38□□□□□ -0.43
VAMP4-203ENST00000474047 DANCRP0C864 163 aa12.38□□□□□ -0.43
VAMP4-203ENST00000474047 TTKP33981 857 aa12.38□□□□□ -0.43
VAMP4-203ENST00000474047 GUCA1AP43080 201 aaPredicted RBP12.38□□□□□ -0.43
VAMP4-203ENST00000474047 PTDSS1P48651 473 aaKnown RBP12.38□□□□□ -0.43
VAMP4-203ENST00000474047 RUNX1T1Q06455 604 aa12.38□□□□□ -0.43
VAMP4-203ENST00000474047 TRIM25Q14258 630 aaKnown RBP12.38□□□□□ -0.43
VAMP4-203ENST00000474047 ARMC4Q5T2S8 1044 aa12.38□□□□□ -0.43
VAMP4-203ENST00000474047 YTHDF3Q7Z739 585 aaKnown RBP12.38□□□□□ -0.43
VAMP4-203ENST00000474047 MUC15Q8N387 334 aa12.38□□□□□ -0.43
VAMP4-203ENST00000474047 OR4K5Q8NGD3 323 aa12.38□□□□□ -0.43
VAMP4-203ENST00000474047 THTPAQ9BU02 230 aa12.38□□□□□ -0.43
VAMP4-203ENST00000474047 GSX2Q9BZM3 304 aa12.38□□□□□ -0.43
VAMP4-203ENST00000474047 C1orf21Q9H246 121 aa12.38□□□□□ -0.43
VAMP4-203ENST00000474047 KCNN2Q9H2S1 579 aa12.38□□□□□ -0.43
VAMP4-203ENST00000474047 RNF121Q9H920 327 aa12.38□□□□□ -0.43
VAMP4-203ENST00000474047 IL1RAPQ9NPH3 570 aa12.38□□□□□ -0.43
VAMP4-203ENST00000474047 CRNNQ9UBG3 495 aaPredicted RBP12.38□□□□□ -0.43
VAMP4-203ENST00000474047 GRHPRQ9UBQ7 328 aa12.38□□□□□ -0.43
VAMP4-203ENST00000474047 ZNF346Q9UL40 294 aaKnown RBP12.38□□□□□ -0.43
VAMP4-203ENST00000474047 TRBV4-1A0A0J9YWV2 114 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 A6NIZ1 184 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 NPIPB13A6NJU9 1138 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 VSTM5A8MXK1 200 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 NPIPB4C9JG80 1138 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 GYG2O15488 501 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 UBL3O95164 117 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 BMP4P12644 408 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 RRM2P31350 389 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 APOBEC3AP31941 199 aaPredicted RBP12.37□□□□□ -0.43
VAMP4-203ENST00000474047 IFNGR2P38484 337 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 CDKN1AP38936 164 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 RAP1BP61224 184 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 RAP1AP62834 184 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 NAAAQ02083 359 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 FAM205BPQ63HN1 556 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 ZNF544Q6NX49 715 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 ZNF627Q7L945 461 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 SLC22A24Q8N4F4 322 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 WFDC11Q8NEX6 87 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 IL17RDQ8NFM7 739 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 NSMAFQ92636 917 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 CCDC124Q96CT7 223 aaKnown RBP12.37□□□□□ -0.43
VAMP4-203ENST00000474047 MRPL13Q9BYD1 178 aaKnown RBP12.37□□□□□ -0.43
VAMP4-203ENST00000474047 DENND2DQ9H6A0 471 aaPredicted RBP12.37□□□□□ -0.43
VAMP4-203ENST00000474047 TMEM38BQ9NVV0 291 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 TAS2R1Q9NYW7 299 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 XKRYO14609 159 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 CDC42EP2O14613 210 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 OR10H3O60404 316 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 UBOX5O94941 541 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 IGKV3-15P01624 115 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 IGLV1-44P01699 117 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 SEMG1P04279 462 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 CELA3BP08861 270 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 ATP6V1B2P21281 511 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 GIPRP48546 466 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 RAB1AP62820 205 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 ERVK-25P63136 954 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 CHRNB3Q05901 458 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 FAM98BQ52LJ0 330 aaKnown RBP12.37□□□□□ -0.43
VAMP4-203ENST00000474047 TMEM53Q6P2H8 277 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 VHLLQ6RSH7 139 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 B3GLCTQ6Y288 498 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 SKA3Q8IX90 412 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 OR4F15Q8NGB8 312 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 FNDC8Q8TC99 324 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 HDAC2Q92769 488 aaKnown RBP12.37□□□□□ -0.43
VAMP4-203ENST00000474047 POP5Q969H6 163 aaKnown RBP12.37□□□□□ -0.43
VAMP4-203ENST00000474047 SH3GL3Q99963 347 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 TRAF4Q9BUZ4 470 aaPredicted RBP12.37□□□□□ -0.43
VAMP4-203ENST00000474047 ALG12Q9BV10 488 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 TRIM15Q9C019 465 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 CBLN4Q9NTU7 201 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 ZNF701Q9NV72 531 aaPredicted RBP12.37□□□□□ -0.43
VAMP4-203ENST00000474047 FBXL3Q9UKT7 428 aa12.37□□□□□ -0.43
VAMP4-203ENST00000474047 SH3PXD2BA1X283 911 aa12.36□□□□□ -0.43
VAMP4-203ENST00000474047 UNC119BA6NIH7 251 aa12.36□□□□□ -0.43
VAMP4-203ENST00000474047 NDUFB2O95178 105 aa12.36□□□□□ -0.43
VAMP4-203ENST00000474047 IGHMP01871 453 aa12.36□□□□□ -0.43
VAMP4-203ENST00000474047 SEC23BQ15437 767 aa12.36□□□□□ -0.43
VAMP4-203ENST00000474047 SGCAQ16586 387 aa12.36□□□□□ -0.43
VAMP4-203ENST00000474047 HIST3H3Q16695 136 aa12.36□□□□□ -0.43
VAMP4-203ENST00000474047 SLC36A2Q495M3 483 aa12.36□□□□□ -0.43
VAMP4-203ENST00000474047 THEM4Q5T1C6 240 aa12.36□□□□□ -0.43
VAMP4-203ENST00000474047 PRSS57Q6UWY2 283 aa12.36□□□□□ -0.43
VAMP4-203ENST00000474047 SLC16A14Q7RTX9 510 aa12.36□□□□□ -0.43
VAMP4-203ENST00000474047 DPPA2Q7Z7J5 298 aa12.36□□□□□ -0.43
VAMP4-203ENST00000474047 DTX2Q86UW9 622 aa12.36□□□□□ -0.43
VAMP4-203ENST00000474047 IGFBPL1Q8WX77 278 aa12.36□□□□□ -0.43
VAMP4-203ENST00000474047 RSRC1Q96IZ7 334 aaKnown RBP12.36□□□□□ -0.43
VAMP4-203ENST00000474047 DHRS1Q96LJ7 313 aa12.36□□□□□ -0.43
VAMP4-203ENST00000474047 B3GNT2Q9NY97 397 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms