RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 NUDT6P53370 316 aa11.33□□□□□ -0.6
TRAF4-208ENST00000469529 BIDP55957 195 aa11.33□□□□□ -0.6
TRAF4-208ENST00000469529 RUNX1T1Q06455 604 aa11.33□□□□□ -0.6
TRAF4-208ENST00000469529 RASGEF1BQ0VAM2 473 aa11.33□□□□□ -0.6
TRAF4-208ENST00000469529 TEX30Q5JUR7 227 aa11.33□□□□□ -0.6
TRAF4-208ENST00000469529 RIPPLY2Q5TAB7 128 aa11.33□□□□□ -0.6
TRAF4-208ENST00000469529 DNM1P34Q6PK57 102 aa11.33□□□□□ -0.6
TRAF4-208ENST00000469529 CHMP1BQ7LBR1 199 aa11.33□□□□□ -0.6
TRAF4-208ENST00000469529 GPAT4Q86UL3 456 aa11.33□□□□□ -0.6
TRAF4-208ENST00000469529 TMEM123Q8N131 208 aa11.33□□□□□ -0.6
TRAF4-208ENST00000469529 STX19Q8N4C7 294 aa11.33□□□□□ -0.6
TRAF4-208ENST00000469529 SVOPQ8N4V2 548 aa11.33□□□□□ -0.6
TRAF4-208ENST00000469529 OR52I1Q8NGK6 324 aa11.33□□□□□ -0.6
TRAF4-208ENST00000469529 MYCBPQ99417 103 aaPredicted RBP11.33□□□□□ -0.6
TRAF4-208ENST00000469529 SLX1AQ9BQ83 275 aa11.33□□□□□ -0.6
TRAF4-208ENST00000469529 TUBA1CQ9BQE3 449 aa11.33□□□□□ -0.6
TRAF4-208ENST00000469529 ZNF649Q9BS31 505 aa11.33□□□□□ -0.6
TRAF4-208ENST00000469529 NUAK2Q9H093 628 aa11.33□□□□□ -0.6
TRAF4-208ENST00000469529 SLC25A18Q9H1K4 315 aa11.33□□□□□ -0.6
TRAF4-208ENST00000469529 SYT4Q9H2B2 425 aa11.33□□□□□ -0.6
TRAF4-208ENST00000469529 OR51V1Q9H2C8 321 aa11.33□□□□□ -0.6
TRAF4-208ENST00000469529 MED20Q9H944 212 aa11.33□□□□□ -0.6
TRAF4-208ENST00000469529 ZNF71Q9NQZ8 489 aaPredicted RBP11.33□□□□□ -0.6
TRAF4-208ENST00000469529 MED29Q9NX70 200 aa11.33□□□□□ -0.6
TRAF4-208ENST00000469529 FOXD3Q9UJU5 478 aaPredicted RBP11.33□□□□□ -0.6
TRAF4-208ENST00000469529 SNX5Q9Y5X3 404 aa11.33□□□□□ -0.6
TRAF4-208ENST00000469529 A0A1B0GTH9 108 aa11.32□□□□□ -0.6
TRAF4-208ENST00000469529 CD8B2A6NJW9 211 aa11.32□□□□□ -0.6
TRAF4-208ENST00000469529 KHDRBS3O75525 346 aaKnown RBP11.32□□□□□ -0.6
TRAF4-208ENST00000469529 PLGP00747 810 aaPredicted RBP11.32□□□□□ -0.6
TRAF4-208ENST00000469529 YES1P07947 543 aa11.32□□□□□ -0.6
TRAF4-208ENST00000469529 STSP08842 583 aa11.32□□□□□ -0.6
TRAF4-208ENST00000469529 GABRA1P14867 456 aa11.32□□□□□ -0.6
TRAF4-208ENST00000469529 C21orf33P30042 268 aaPredicted RBP11.32□□□□□ -0.6
TRAF4-208ENST00000469529 GSTT1P30711 240 aa11.32□□□□□ -0.6
TRAF4-208ENST00000469529 CAPZA2P47755 286 aa11.32□□□□□ -0.6
TRAF4-208ENST00000469529 CDH15P55291 814 aa11.32□□□□□ -0.6
TRAF4-208ENST00000469529 CLDN17P56750 224 aa11.32□□□□□ -0.6
TRAF4-208ENST00000469529 EMX1Q04741 257 aaPredicted RBP11.32□□□□□ -0.6
TRAF4-208ENST00000469529 SRYQ05066 204 aa11.32□□□□□ -0.6
TRAF4-208ENST00000469529 KLRB1Q12918 225 aa11.32□□□□□ -0.6
TRAF4-208ENST00000469529 TBCEQ15813 527 aaPredicted RBP11.32□□□□□ -0.6
TRAF4-208ENST00000469529 KCNMB1Q16558 191 aa11.32□□□□□ -0.6
TRAF4-208ENST00000469529 PCK2Q16822 640 aa11.32□□□□□ -0.6
TRAF4-208ENST00000469529 KLHL12Q53G59 568 aa11.32□□□□□ -0.6
TRAF4-208ENST00000469529 C10orf128Q5T292 105 aa11.32□□□□□ -0.6
TRAF4-208ENST00000469529 SLC25A47Q6Q0C1 308 aa11.32□□□□□ -0.6
TRAF4-208ENST00000469529 AHSA2Q719I0 299 aa11.32□□□□□ -0.6
TRAF4-208ENST00000469529 C20orf196Q8IYI0 205 aa11.32□□□□□ -0.6
TRAF4-208ENST00000469529 PROKR2Q8NFJ6 384 aa11.32□□□□□ -0.6
TRAF4-208ENST00000469529 ROBO4Q8WZ75 1007 aa11.32□□□□□ -0.6
TRAF4-208ENST00000469529 SGCDQ92629 289 aa11.32□□□□□ -0.6
TRAF4-208ENST00000469529 WNT2BQ93097 391 aa11.32□□□□□ -0.6
TRAF4-208ENST00000469529 ZNF385AQ96PM9 386 aaKnown RBP11.32□□□□□ -0.6
TRAF4-208ENST00000469529 OR2M2Q96R28 347 aa11.32□□□□□ -0.6
TRAF4-208ENST00000469529 LINC00470Q9BZP3 86 aa11.32□□□□□ -0.6
TRAF4-208ENST00000469529 ADGRL4Q9HBW9 690 aa11.32□□□□□ -0.6
TRAF4-208ENST00000469529 SRA1Q9HD15 236 aaKnown RBP11.32□□□□□ -0.6
TRAF4-208ENST00000469529 RPRD1BQ9NQG5 326 aaKnown RBP11.32□□□□□ -0.6
TRAF4-208ENST00000469529 GLTPQ9NZD2 209 aa11.32□□□□□ -0.6
TRAF4-208ENST00000469529 EMC3Q9P0I2 261 aa11.32□□□□□ -0.6
TRAF4-208ENST00000469529 CLCF1Q9UBD9 225 aa11.32□□□□□ -0.6
TRAF4-208ENST00000469529 TNFRSF10DQ9UBN6 386 aa11.32□□□□□ -0.6
TRAF4-208ENST00000469529 EXOSC1Q9Y3B2 195 aaKnown RBP11.32□□□□□ -0.6
TRAF4-208ENST00000469529 TNRC6AQ8NDV7 1962 aaKnown RBP11.32□□□□□ -0.6
TRAF4-208ENST00000469529 IGHV3-15A0A0B4J1V0 119 aa11.31□□□□□ -0.6
TRAF4-208ENST00000469529 TMEM129A0AVI4 362 aa11.31□□□□□ -0.6
TRAF4-208ENST00000469529 DCTN6O00399 190 aa11.31□□□□□ -0.6
TRAF4-208ENST00000469529 SLC16A7O60669 478 aa11.31□□□□□ -0.6
TRAF4-208ENST00000469529 SERPINI2O75830 405 aa11.31□□□□□ -0.6
TRAF4-208ENST00000469529 RAB36O95755 333 aa11.31□□□□□ -0.6
TRAF4-208ENST00000469529 MT-ND2P03891 347 aa11.31□□□□□ -0.6
TRAF4-208ENST00000469529 OR2T7P0C7T2 308 aa11.31□□□□□ -0.6
TRAF4-208ENST00000469529 CLUP10909 449 aa11.31□□□□□ -0.6
TRAF4-208ENST00000469529 CTLA4P16410 223 aa11.31□□□□□ -0.6
TRAF4-208ENST00000469529 TTKP33981 857 aa11.31□□□□□ -0.6
TRAF4-208ENST00000469529 NTF4P34130 210 aa11.31□□□□□ -0.6
TRAF4-208ENST00000469529 TDGF1P3P51864 188 aa11.31□□□□□ -0.6
TRAF4-208ENST00000469529 HSF2Q03933 536 aa11.31□□□□□ -0.6
TRAF4-208ENST00000469529 GLO1Q04760 184 aa11.31□□□□□ -0.6
TRAF4-208ENST00000469529 SYT6Q5T7P8 510 aaPredicted RBP11.31□□□□□ -0.6
TRAF4-208ENST00000469529 UBE2UQ5VVX9 321 aa11.31□□□□□ -0.6
TRAF4-208ENST00000469529 NSUN5P2Q63ZY6 315 aa11.31□□□□□ -0.6
TRAF4-208ENST00000469529 XAF1Q6GPH4 301 aa11.31□□□□□ -0.6
TRAF4-208ENST00000469529 LRFN4Q6PJG9 635 aa11.31□□□□□ -0.6
TRAF4-208ENST00000469529 FOXL2NBQ6ZUU3 175 aa11.31□□□□□ -0.6
TRAF4-208ENST00000469529 FGD2Q7Z6J4 655 aa11.31□□□□□ -0.6
TRAF4-208ENST00000469529 WDFY1Q8IWB7 410 aa11.31□□□□□ -0.6
TRAF4-208ENST00000469529 TIGD4Q8IY51 512 aa11.31□□□□□ -0.6
TRAF4-208ENST00000469529 ACBD7Q8N6N7 88 aa11.31□□□□□ -0.6
TRAF4-208ENST00000469529 NANOGP1Q8N7R0 232 aa11.31□□□□□ -0.6
TRAF4-208ENST00000469529 TEX19Q8NA77 164 aa11.31□□□□□ -0.6
TRAF4-208ENST00000469529 OR9Q1Q8NGQ5 310 aa11.31□□□□□ -0.6
TRAF4-208ENST00000469529 OR2T27Q8NH04 317 aa11.31□□□□□ -0.6
TRAF4-208ENST00000469529 FNDC9Q8TBE3 224 aa11.31□□□□□ -0.6
TRAF4-208ENST00000469529 ZNRF4Q8WWF5 429 aa11.31□□□□□ -0.6
TRAF4-208ENST00000469529 FCGR1BQ92637 280 aa11.31□□□□□ -0.6
TRAF4-208ENST00000469529 MCHR2Q969V1 340 aa11.31□□□□□ -0.6
TRAF4-208ENST00000469529 RELTQ969Z4 430 aa11.31□□□□□ -0.6
TRAF4-208ENST00000469529 RHNO1Q9BSD3 238 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms