RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 NPR2P20594 1047 aa8.8□□□□□ -1
SF3A3-204ENST00000462258 THBS4P35443 961 aa8.8□□□□□ -1
SF3A3-204ENST00000462258 YAP1P46937 504 aaKnown RBP8.8□□□□□ -1
SF3A3-204ENST00000462258 RAB1AP62820 205 aa8.8□□□□□ -1
SF3A3-204ENST00000462258 RUNX1T1Q06455 604 aa8.8□□□□□ -1
SF3A3-204ENST00000462258 TOP3AQ13472 1001 aaPredicted RBP8.8□□□□□ -1
SF3A3-204ENST00000462258 ALG10Q5BKT4 473 aa8.8□□□□□ -1
SF3A3-204ENST00000462258 PIWIL3Q7Z3Z3 882 aaKnown RBP8.8□□□□□ -1
SF3A3-204ENST00000462258 NRMQ8IXM6 262 aa8.8□□□□□ -1
SF3A3-204ENST00000462258 SVOPLQ8N434 492 aa8.8□□□□□ -1
SF3A3-204ENST00000462258 SLC22A24Q8N4F4 322 aa8.8□□□□□ -1
SF3A3-204ENST00000462258 ANKS4BQ8N8V4 417 aa8.8□□□□□ -1
SF3A3-204ENST00000462258 OR10H5Q8NGA6 315 aa8.8□□□□□ -1
SF3A3-204ENST00000462258 MOSPD2Q8NHP6 518 aa8.8□□□□□ -1
SF3A3-204ENST00000462258 C10orf105Q8TEF2 133 aa8.8□□□□□ -1
SF3A3-204ENST00000462258 LIPHQ8WWY8 451 aa8.8□□□□□ -1
SF3A3-204ENST00000462258 FAM162AQ96A26 154 aa8.8□□□□□ -1
SF3A3-204ENST00000462258 BPIFA2Q96DR5 249 aa8.8□□□□□ -1
SF3A3-204ENST00000462258 CMTM5Q96DZ9 223 aa8.8□□□□□ -1
SF3A3-204ENST00000462258 ZNF75AQ96N20 296 aa8.8□□□□□ -1
SF3A3-204ENST00000462258 VRK1Q99986 396 aaPredicted RBP8.8□□□□□ -1
SF3A3-204ENST00000462258 PLK3Q9H4B4 646 aa8.8□□□□□ -1
SF3A3-204ENST00000462258 DENND2DQ9H6A0 471 aaPredicted RBP8.8□□□□□ -1
SF3A3-204ENST00000462258 SPAG4Q9NPE6 437 aa8.8□□□□□ -1
SF3A3-204ENST00000462258 MAN2C1Q9NTJ4 1040 aa8.8□□□□□ -1
SF3A3-204ENST00000462258 STX18Q9P2W9 335 aaKnown RBP8.8□□□□□ -1
SF3A3-204ENST00000462258 RHCGQ9UBD6 479 aa8.8□□□□□ -1
SF3A3-204ENST00000462258 HIF3AQ9Y2N7 669 aa8.8□□□□□ -1
SF3A3-204ENST00000462258 SNX13Q9Y5W8 968 aa8.8□□□□□ -1
SF3A3-204ENST00000462258 ABCA1O95477 2261 aa8.8□□□□□ -1
SF3A3-204ENST00000462258 CD5LO43866 347 aa8.79□□□□□ -1
SF3A3-204ENST00000462258 GPRIN2O60269 458 aa8.79□□□□□ -1
SF3A3-204ENST00000462258 SNX3O60493 162 aa8.79□□□□□ -1
SF3A3-204ENST00000462258 TRMUO75648 421 aaKnown RBP8.79□□□□□ -1
SF3A3-204ENST00000462258 F12P00748 615 aaPredicted RBP8.79□□□□□ -1
SF3A3-204ENST00000462258 PATE4P0C8F1 98 aa8.79□□□□□ -1
SF3A3-204ENST00000462258 OR8G3PP0DMU2 310 aa8.79□□□□□ -1
SF3A3-204ENST00000462258 SAGP10523 405 aaPredicted RBP8.79□□□□□ -1
SF3A3-204ENST00000462258 NR2C1P13056 603 aa8.79□□□□□ -1
SF3A3-204ENST00000462258 ACADSP16219 412 aa8.79□□□□□ -1
SF3A3-204ENST00000462258 NCK1P16333 377 aa8.79□□□□□ -1
SF3A3-204ENST00000462258 DRD4P21917 467 aa8.79□□□□□ -1
SF3A3-204ENST00000462258 FUT4P22083 530 aa8.79□□□□□ -1
SF3A3-204ENST00000462258 PRDX6P30041 224 aa8.79□□□□□ -1
SF3A3-204ENST00000462258 LSP1P33241 339 aa8.79□□□□□ -1
SF3A3-204ENST00000462258 ZNF84P51523 738 aa8.79□□□□□ -1
SF3A3-204ENST00000462258 PSME3P61289 254 aa8.79□□□□□ -1
SF3A3-204ENST00000462258 RPS23P62266 143 aaKnown RBP8.79□□□□□ -1
SF3A3-204ENST00000462258 LSM11P83369 360 aaKnown RBP eCLIP8.79□□□□□ -1
SF3A3-204ENST00000462258 MYBPC1Q00872 1141 aa8.79□□□□□ -1
SF3A3-204ENST00000462258 GALK2Q01415 458 aa8.79□□□□□ -1
SF3A3-204ENST00000462258 CD47Q08722 323 aa8.79□□□□□ -1
SF3A3-204ENST00000462258 RAB39AQ14964 217 aa8.79□□□□□ -1
SF3A3-204ENST00000462258 TRAM2Q15035 370 aa8.79□□□□□ -1
SF3A3-204ENST00000462258 HIST3H3Q16695 136 aa8.79□□□□□ -1
SF3A3-204ENST00000462258 NRN1LQ496H8 165 aa8.79□□□□□ -1
SF3A3-204ENST00000462258 C10orf128Q5T292 105 aa8.79□□□□□ -1
SF3A3-204ENST00000462258 LRFN4Q6PJG9 635 aa8.79□□□□□ -1
SF3A3-204ENST00000462258 FKBP9P1Q75LS8 142 aa8.79□□□□□ -1
SF3A3-204ENST00000462258 ZNF584Q8IVC4 421 aa8.79□□□□□ -1
SF3A3-204ENST00000462258 SKA3Q8IX90 412 aa8.79□□□□□ -1
SF3A3-204ENST00000462258 SYT14Q8NB59 555 aa8.79□□□□□ -1
SF3A3-204ENST00000462258 RBM15BQ8NDT2 890 aaKnown RBP8.79□□□□□ -1
SF3A3-204ENST00000462258 OR4K5Q8NGD3 323 aa8.79□□□□□ -1
SF3A3-204ENST00000462258 MCHR2Q969V1 340 aa8.79□□□□□ -1
SF3A3-204ENST00000462258 SEPHS2Q99611 448 aa8.79□□□□□ -1
SF3A3-204ENST00000462258 SH3GL3Q99963 347 aa8.79□□□□□ -1
SF3A3-204ENST00000462258 PIMREGQ9BSJ6 248 aa8.79□□□□□ -1
SF3A3-204ENST00000462258 FNDC11Q9BVV2 318 aa8.79□□□□□ -1
SF3A3-204ENST00000462258 MRPL13Q9BYD1 178 aaKnown RBP8.79□□□□□ -1
SF3A3-204ENST00000462258 DYNLRB1Q9NP97 96 aa8.79□□□□□ -1
SF3A3-204ENST00000462258 MYOZ1Q9NP98 299 aaPredicted RBP8.79□□□□□ -1
SF3A3-204ENST00000462258 FBXO9Q9UK97 447 aaPredicted RBP8.79□□□□□ -1
SF3A3-204ENST00000462258 YLPM1P49750 1951 aaKnown RBP8.79□□□□□ -1
SF3A3-204ENST00000462258 ABCA2Q9BZC7 2435 aa8.79□□□□□ -1
SF3A3-204ENST00000462258 TRAV27A0A087WT01 109 aa8.78□□□□□ -1
SF3A3-204ENST00000462258 HTR3EA5X5Y0 456 aa8.78□□□□□ -1
SF3A3-204ENST00000462258 VSTM5A8MXK1 200 aa8.78□□□□□ -1
SF3A3-204ENST00000462258 NDUFS8O00217 210 aa8.78□□□□□ -1
SF3A3-204ENST00000462258 FFAR1O14842 300 aa8.78□□□□□ -1
SF3A3-204ENST00000462258 TLX2O43763 284 aaPredicted RBP8.78□□□□□ -1
SF3A3-204ENST00000462258 PRSS23O95084 383 aa8.78□□□□□ -1
SF3A3-204ENST00000462258 SLC2A10O95528 541 aa8.78□□□□□ -1
SF3A3-204ENST00000462258 IGHMP01871 453 aa8.78□□□□□ -1
SF3A3-204ENST00000462258 ERCC1P07992 297 aaPredicted RBP8.78□□□□□ -1
SF3A3-204ENST00000462258 ZNF35P13682 527 aa8.78□□□□□ -1
SF3A3-204ENST00000462258 MAKP20794 623 aa8.78□□□□□ -1
SF3A3-204ENST00000462258 NR4A1P22736 598 aa8.78□□□□□ -1
SF3A3-204ENST00000462258 GPR4P46093 362 aa8.78□□□□□ -1
SF3A3-204ENST00000462258 PDLIM4P50479 330 aa8.78□□□□□ -1
SF3A3-204ENST00000462258 ZNF133P52736 654 aaPredicted RBP8.78□□□□□ -1
SF3A3-204ENST00000462258 FMODQ06828 376 aa8.78□□□□□ -1
SF3A3-204ENST00000462258 LOXL1Q08397 574 aaPredicted RBP8.78□□□□□ -1
SF3A3-204ENST00000462258 CARTPTQ16568 116 aa8.78□□□□□ -1
SF3A3-204ENST00000462258 TMEM249Q2WGJ8 235 aa8.78□□□□□ -1
SF3A3-204ENST00000462258 SLC36A2Q495M3 483 aa8.78□□□□□ -1
SF3A3-204ENST00000462258 ARMC4Q5T2S8 1044 aa8.78□□□□□ -1
SF3A3-204ENST00000462258 GKAP1Q5VSY0 366 aaPredicted RBP8.78□□□□□ -1
SF3A3-204ENST00000462258 TMEM53Q6P2H8 277 aa8.78□□□□□ -1
SF3A3-204ENST00000462258 ZNF730Q6ZMV8 503 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms