RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 PITPNC1Q9UKF7 332 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 GOLT1BQ9Y3E0 138 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 CHD4Q14839 1912 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.08□□□□□ -2.08
HDAC6-212ENST00000461608 NINLQ9Y2I6 1382 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 IGLV3-22A0A075B6J6 115 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 TRBV9A0A0B4J1U6 114 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 SMCO2A6NFE2 343 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 ERVV-1B6SEH8 477 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 H0YIV9 168 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 H7C0C1 242 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 RAB29O14966 203 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 LSM1O15116 133 aaKnown RBP2.07□□□□□ -2.08
HDAC6-212ENST00000461608 CHST1O43916 411 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 CACNG3O60359 315 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 RETP07949 1114 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 CT62P0C5K7 136 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 DUX4L4P0CJ87 422 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 ZNF17P17021 662 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 DRD3P35462 400 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 CTRLP40313 264 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 ATP5OP48047 213 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 TMED10P49755 219 aaKnown RBP2.07□□□□□ -2.08
HDAC6-212ENST00000461608 MNAT1P51948 309 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 TCP10Q12799 353 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 CLINT1Q14677 625 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 XKR4Q5GH76 650 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 LCE3EQ5T5B0 92 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 FRMPD2BQ6IN97 320 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 TTC23LQ6PF05 361 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 CNIH2Q6PI25 160 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 ACP7Q6ZNF0 438 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 Q6ZSR3 168 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 EIF3MQ7L2H7 374 aaKnown RBP2.07□□□□□ -2.08
HDAC6-212ENST00000461608 NIPA1Q7RTP0 329 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 C6orf120Q7Z4R8 191 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 LUZP2Q86TE4 346 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 COMMD1Q8N668 190 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 CD300LFQ8TDQ1 290 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 TMEM54Q969K7 222 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 RPUSD4Q96CM3 377 aaKnown RBP2.07□□□□□ -2.08
HDAC6-212ENST00000461608 AURKBQ96GD4 344 aaPredicted RBP2.07□□□□□ -2.08
HDAC6-212ENST00000461608 TSSK3Q96PN8 268 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 GSDMAQ96QA5 445 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 P2RX4Q99571 388 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 ATP5SQ99766 215 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 LZTS2Q9BRK4 669 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 C11orf70Q9BRQ4 267 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 GEMIN7Q9H840 131 aaKnown RBP2.07□□□□□ -2.08
HDAC6-212ENST00000461608 HRASLS2Q9NWW9 162 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 LSM7Q9UK45 103 aaKnown RBP2.07□□□□□ -2.08
HDAC6-212ENST00000461608 CELA1Q9UNI1 258 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 ING4Q9UNL4 249 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 SAR1BQ9Y6B6 198 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 AKNAQ7Z591 1439 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 ADAMTS9Q9P2N4 1935 aa2.07□□□□□ -2.08
HDAC6-212ENST00000461608 GLYATL1P3A0A0U1RQE8 302 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 A0A1B0GVI7 797 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 WI2-2373I1.2A0A1W2PRP0 233 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 ZNF726A6NNF4 738 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 LYRM9A8MSI8 78 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 DNALI1O14645 258 aaPredicted RBP2.06□□□□□ -2.08
HDAC6-212ENST00000461608 PPP1R2P9O14990 202 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 CASC3O15234 703 aaKnown RBP2.06□□□□□ -2.08
HDAC6-212ENST00000461608 ZNF861PO60384 105 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 OR2F2O95006 317 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 C6orf47O95873 294 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 FGGP02679 453 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 BGLAPP02818 100 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 CT45A6P0DMU7 189 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 CT45A5P0DMU8 189 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 CT45A7P0DMV0 189 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 ANXA8P13928 327 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 CD1EP15812 388 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 OMGP23515 440 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 CCNE1P24864 410 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 HMOX2P30519 316 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 RBMXP38159 391 aaKnown RBP2.06□□□□□ -2.08
HDAC6-212ENST00000461608 AQP2P41181 271 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 CX3CR1P49238 355 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 ECH1Q13011 328 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 AQP6Q13520 282 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 ZNF630Q2M218 657 aaPredicted RBP2.06□□□□□ -2.08
HDAC6-212ENST00000461608 ZBED5Q49AG3 693 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 BEX5Q5H9J7 111 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 CT45A1Q5HYN5 189 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 THEM4Q5T1C6 240 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 ANXA8L1Q5VT79 327 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 C22orf42Q6IC83 251 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 ANKRD26P1Q6NSI1 321 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 ZNF836Q6ZNA1 936 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 C19orf35Q6ZS72 473 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 ABHD13Q7L211 337 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 C11orf53Q8IXP5 236 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 GABRG1Q8N1C3 465 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 MREGQ8N565 214 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 Q8N7P7 452 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 FBXL13Q8NEE6 735 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 OR1S2Q8NGQ3 325 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 OR2A1Q8NGT9 310 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms