RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 MOSPD2Q8NHP6 518 aa16.35■□□□□ 0.21
COL5A1-203ENST00000460264 FGFBP3Q8TAT2 258 aa16.35■□□□□ 0.21
COL5A1-203ENST00000460264 GEMIN6Q8WXD5 167 aaKnown RBP16.35■□□□□ 0.21
COL5A1-203ENST00000460264 ZNF347Q96SE7 839 aa16.35■□□□□ 0.21
COL5A1-203ENST00000460264 VRK1Q99986 396 aaPredicted RBP16.35■□□□□ 0.21
COL5A1-203ENST00000460264 ELAC2Q9BQ52 826 aaKnown RBP16.35■□□□□ 0.21
COL5A1-203ENST00000460264 MRPL13Q9BYD1 178 aaKnown RBP16.35■□□□□ 0.21
COL5A1-203ENST00000460264 MYLK2Q9H1R3 596 aa16.35■□□□□ 0.21
COL5A1-203ENST00000460264 MAN2C1Q9NTJ4 1040 aa16.35■□□□□ 0.21
COL5A1-203ENST00000460264 FBXL3Q9UKT7 428 aa16.35■□□□□ 0.21
COL5A1-203ENST00000460264 SNX13Q9Y5W8 968 aa16.35■□□□□ 0.21
COL5A1-203ENST00000460264 CENPBD1B2RD01 187 aa16.34■□□□□ 0.21
COL5A1-203ENST00000460264 TLX2O43763 284 aaPredicted RBP16.34■□□□□ 0.21
COL5A1-203ENST00000460264 ZNF682O95780 498 aa16.34■□□□□ 0.21
COL5A1-203ENST00000460264 PATE4P0C8F1 98 aa16.34■□□□□ 0.21
COL5A1-203ENST00000460264 OR8G3PP0DMU2 310 aa16.34■□□□□ 0.21
COL5A1-203ENST00000460264 YAP1P46937 504 aaKnown RBP16.34■□□□□ 0.21
COL5A1-203ENST00000460264 SEC24CP53992 1094 aa16.34■□□□□ 0.21
COL5A1-203ENST00000460264 LSM11P83369 360 aaKnown RBP eCLIP16.34■□□□□ 0.21
COL5A1-203ENST00000460264 HDDC2Q7Z4H3 204 aa16.34■□□□□ 0.21
COL5A1-203ENST00000460264 PRIMA1Q86XR5 153 aa16.34■□□□□ 0.21
COL5A1-203ENST00000460264 ZNF584Q8IVC4 421 aa16.34■□□□□ 0.21
COL5A1-203ENST00000460264 MCHR2Q969V1 340 aa16.34■□□□□ 0.21
COL5A1-203ENST00000460264 TNFRSF13CQ96RJ3 184 aa16.34■□□□□ 0.21
COL5A1-203ENST00000460264 SH3GL3Q99963 347 aa16.34■□□□□ 0.21
COL5A1-203ENST00000460264 FBXO9Q9UK97 447 aaPredicted RBP16.34■□□□□ 0.21
COL5A1-203ENST00000460264 HIF3AQ9Y2N7 669 aa16.34■□□□□ 0.21
COL5A1-203ENST00000460264 RTTNQ86VV8 2226 aa16.34■□□□□ 0.21
COL5A1-203ENST00000460264 TMEM129A0AVI4 362 aa16.33■□□□□ 0.2
COL5A1-203ENST00000460264 HTR3EA5X5Y0 456 aa16.33■□□□□ 0.2
COL5A1-203ENST00000460264 NPIPB13A6NJU9 1138 aa16.33■□□□□ 0.2
COL5A1-203ENST00000460264 VSTM5A8MXK1 200 aa16.33■□□□□ 0.2
COL5A1-203ENST00000460264 NPIPB4C9JG80 1138 aa16.33■□□□□ 0.2
COL5A1-203ENST00000460264 J3KTA2 159 aa16.33■□□□□ 0.2
COL5A1-203ENST00000460264 FFAR1O14842 300 aa16.33■□□□□ 0.2
COL5A1-203ENST00000460264 GSTA4O15217 222 aa16.33■□□□□ 0.2
COL5A1-203ENST00000460264 TRMUO75648 421 aaKnown RBP16.33■□□□□ 0.2
COL5A1-203ENST00000460264 IFI30P13284 250 aa16.33■□□□□ 0.2
COL5A1-203ENST00000460264 ACADSP16219 412 aa16.33■□□□□ 0.2
COL5A1-203ENST00000460264 IFNA8P32881 189 aa16.33■□□□□ 0.2
COL5A1-203ENST00000460264 PDLIM4P50479 330 aa16.33■□□□□ 0.2
COL5A1-203ENST00000460264 MYBPC1Q00872 1141 aa16.33■□□□□ 0.2
COL5A1-203ENST00000460264 RAB39AQ14964 217 aa16.33■□□□□ 0.2
COL5A1-203ENST00000460264 TMEM249Q2WGJ8 235 aa16.33■□□□□ 0.2
COL5A1-203ENST00000460264 ARMC4Q5T2S8 1044 aa16.33■□□□□ 0.2
COL5A1-203ENST00000460264 CBLL1Q75N03 491 aa16.33■□□□□ 0.2
COL5A1-203ENST00000460264 CDK20Q8IZL9 346 aa16.33■□□□□ 0.2
COL5A1-203ENST00000460264 SYT14Q8NB59 555 aa16.33■□□□□ 0.2
COL5A1-203ENST00000460264 OR4K5Q8NGD3 323 aa16.33■□□□□ 0.2
COL5A1-203ENST00000460264 BPIFA2Q96DR5 249 aa16.33■□□□□ 0.2
COL5A1-203ENST00000460264 HSH2DQ96JZ2 352 aa16.33■□□□□ 0.2
COL5A1-203ENST00000460264 DOK1Q99704 481 aa16.33■□□□□ 0.2
COL5A1-203ENST00000460264 FAM107BQ9H098 131 aa16.33■□□□□ 0.2
COL5A1-203ENST00000460264 RHCGQ9UBD6 479 aa16.33■□□□□ 0.2
COL5A1-203ENST00000460264 ABCD2Q9UBJ2 740 aa16.33■□□□□ 0.2
COL5A1-203ENST00000460264 VWC2LB2RUY7 222 aa16.32■□□□□ 0.2
COL5A1-203ENST00000460264 NDUFAB1O14561 156 aa16.32■□□□□ 0.2
COL5A1-203ENST00000460264 CRLF1O75462 422 aa16.32■□□□□ 0.2
COL5A1-203ENST00000460264 FARS2O95363 451 aaKnown RBP16.32■□□□□ 0.2
COL5A1-203ENST00000460264 SERPINA1P01009 418 aa16.32■□□□□ 0.2
COL5A1-203ENST00000460264 SERPINA5P05154 406 aa16.32■□□□□ 0.2
COL5A1-203ENST00000460264 ZNF84P51523 738 aa16.32■□□□□ 0.2
COL5A1-203ENST00000460264 ZNF133P52736 654 aaPredicted RBP16.32■□□□□ 0.2
COL5A1-203ENST00000460264 VLDLRP98155 873 aa16.32■□□□□ 0.2
COL5A1-203ENST00000460264 LAPTM4AQ15012 233 aa16.32■□□□□ 0.2
COL5A1-203ENST00000460264 TRAM2Q15035 370 aa16.32■□□□□ 0.2
COL5A1-203ENST00000460264 FXNQ16595 210 aa16.32■□□□□ 0.2
COL5A1-203ENST00000460264 MSMPQ1L6U9 139 aa16.32■□□□□ 0.2
COL5A1-203ENST00000460264 NRN1LQ496H8 165 aa16.32■□□□□ 0.2
COL5A1-203ENST00000460264 IFI44LQ53G44 452 aa16.32■□□□□ 0.2
COL5A1-203ENST00000460264 NRMQ8IXM6 262 aa16.32■□□□□ 0.2
COL5A1-203ENST00000460264 CMTM5Q96DZ9 223 aa16.32■□□□□ 0.2
COL5A1-203ENST00000460264 KCTD14Q9BQ13 255 aaPredicted RBP16.32■□□□□ 0.2
COL5A1-203ENST00000460264 FNDC11Q9BVV2 318 aa16.32■□□□□ 0.2
COL5A1-203ENST00000460264 RAB1BQ9H0U4 201 aa16.32■□□□□ 0.2
COL5A1-203ENST00000460264 MYOZ1Q9NP98 299 aaPredicted RBP16.32■□□□□ 0.2
COL5A1-203ENST00000460264 YAE1D1Q9NRH1 226 aa16.32■□□□□ 0.2
COL5A1-203ENST00000460264 STX18Q9P2W9 335 aaKnown RBP16.32■□□□□ 0.2
COL5A1-203ENST00000460264 CMAHPQ9Y471 501 aa16.32■□□□□ 0.2
COL5A1-203ENST00000460264 SPEF1Q9Y4P9 236 aa16.32■□□□□ 0.2
COL5A1-203ENST00000460264 NDUFS8O00217 210 aa16.31■□□□□ 0.2
COL5A1-203ENST00000460264 PRSS23O95084 383 aa16.31■□□□□ 0.2
COL5A1-203ENST00000460264 IGFBP1P08833 259 aaPredicted RBP16.31■□□□□ 0.2
COL5A1-203ENST00000460264 MAKP20794 623 aa16.31■□□□□ 0.2
COL5A1-203ENST00000460264 USF1P22415 310 aaPredicted RBP16.31■□□□□ 0.2
COL5A1-203ENST00000460264 GALK2Q01415 458 aa16.31■□□□□ 0.2
COL5A1-203ENST00000460264 ALG10Q5BKT4 473 aa16.31■□□□□ 0.2
COL5A1-203ENST00000460264 C10orf128Q5T292 105 aa16.31■□□□□ 0.2
COL5A1-203ENST00000460264 DPPA2Q7Z7J5 298 aa16.31■□□□□ 0.2
COL5A1-203ENST00000460264 MEX3DQ86XN8 651 aaKnown RBP16.31■□□□□ 0.2
COL5A1-203ENST00000460264 ZCCHC24Q8N2G6 241 aaKnown RBP16.31■□□□□ 0.2
COL5A1-203ENST00000460264 MRPL24Q96A35 216 aaKnown RBP16.31■□□□□ 0.2
COL5A1-203ENST00000460264 NMD3Q96D46 503 aaKnown RBP16.31■□□□□ 0.2
COL5A1-203ENST00000460264 PIMREGQ9BSJ6 248 aa16.31■□□□□ 0.2
COL5A1-203ENST00000460264 MRPL37Q9BZE1 423 aaKnown RBP16.31■□□□□ 0.2
COL5A1-203ENST00000460264 TXNIPQ9H3M7 391 aa16.31■□□□□ 0.2
COL5A1-203ENST00000460264 DYNLRB1Q9NP97 96 aa16.31■□□□□ 0.2
COL5A1-203ENST00000460264 ADAM21Q9UKJ8 722 aa16.31■□□□□ 0.2
COL5A1-203ENST00000460264 LOC390937A0A1W2PQ73 354 aa16.3■□□□□ 0.2
COL5A1-203ENST00000460264 SNX3O60493 162 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms