RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 KATNB1Q9BVA0 655 aa18.06■□□□□ 0.48
VARS-218ENST00000459667 MRPL13Q9BYD1 178 aaKnown RBP18.06■□□□□ 0.48
VARS-218ENST00000459667 KRCC1Q9NPI7 259 aaPredicted RBP18.06■□□□□ 0.48
VARS-218ENST00000459667 ITPR3Q14573 2671 aa18.06■□□□□ 0.48
VARS-218ENST00000459667 CDC42EP2O14613 210 aa18.05■□□□□ 0.48
VARS-218ENST00000459667 HLA-HP01893 362 aa18.05■□□□□ 0.48
VARS-218ENST00000459667 CRYAAP02489 173 aa18.05■□□□□ 0.48
VARS-218ENST00000459667 CD79AP11912 226 aa18.05■□□□□ 0.48
VARS-218ENST00000459667 PAX1P15863 534 aa18.05■□□□□ 0.48
VARS-218ENST00000459667 ARR3P36575 388 aa18.05■□□□□ 0.48
VARS-218ENST00000459667 IDH3GP51553 393 aaPredicted RBP18.05■□□□□ 0.48
VARS-218ENST00000459667 CTXN1P60606 82 aa18.05■□□□□ 0.48
VARS-218ENST00000459667 MYBPC1Q00872 1141 aa18.05■□□□□ 0.48
VARS-218ENST00000459667 SPIBQ01892 262 aa18.05■□□□□ 0.48
VARS-218ENST00000459667 NAAAQ02083 359 aa18.05■□□□□ 0.48
VARS-218ENST00000459667 TRAP1Q12931 704 aaKnown RBP18.05■□□□□ 0.48
VARS-218ENST00000459667 NPRL3Q12980 569 aa18.05■□□□□ 0.48
VARS-218ENST00000459667 BNIP1Q12981 228 aa18.05■□□□□ 0.48
VARS-218ENST00000459667 FHL1Q13642 323 aa18.05■□□□□ 0.48
VARS-218ENST00000459667 TAF11Q15544 211 aa18.05■□□□□ 0.48
VARS-218ENST00000459667 HIST3H3Q16695 136 aa18.05■□□□□ 0.48
VARS-218ENST00000459667 PIWIL3Q7Z3Z3 882 aaKnown RBP18.05■□□□□ 0.48
VARS-218ENST00000459667 DTX2Q86UW9 622 aa18.05■□□□□ 0.48
VARS-218ENST00000459667 MDP1Q86V88 176 aa18.05■□□□□ 0.48
VARS-218ENST00000459667 IGFN1Q86VF2 1251 aa18.05■□□□□ 0.48
VARS-218ENST00000459667 LRRC75AQ8NAA5 344 aa18.05■□□□□ 0.48
VARS-218ENST00000459667 SYT14Q8NB59 555 aa18.05■□□□□ 0.48
VARS-218ENST00000459667 NANOS1Q8WY41 292 aaKnown RBP18.05■□□□□ 0.48
VARS-218ENST00000459667 MCHR2Q969V1 340 aa18.05■□□□□ 0.48
VARS-218ENST00000459667 GTPBP3Q969Y2 492 aaKnown RBP18.05■□□□□ 0.48
VARS-218ENST00000459667 FAM46AQ96IP4 442 aaKnown RBP18.05■□□□□ 0.48
VARS-218ENST00000459667 CLPTM1LQ96KA5 538 aa18.05■□□□□ 0.48
VARS-218ENST00000459667 SEPHS2Q99611 448 aa18.05■□□□□ 0.48
VARS-218ENST00000459667 TRAF4Q9BUZ4 470 aaPredicted RBP18.05■□□□□ 0.48
VARS-218ENST00000459667 SEC61A2Q9H9S3 476 aa18.05■□□□□ 0.48
VARS-218ENST00000459667 IL1RAPQ9NPH3 570 aa18.05■□□□□ 0.48
VARS-218ENST00000459667 ZNF701Q9NV72 531 aaPredicted RBP18.05■□□□□ 0.48
VARS-218ENST00000459667 PLCE1Q9P212 2302 aa18.05■□□□□ 0.48
VARS-218ENST00000459667 OVOL3O00110 214 aa18.04■□□□□ 0.48
VARS-218ENST00000459667 DNAJC8O75937 253 aaPredicted RBP18.04■□□□□ 0.48
VARS-218ENST00000459667 IGHMP01871 453 aa18.04■□□□□ 0.48
VARS-218ENST00000459667 CELA3BP08861 270 aa18.04■□□□□ 0.48
VARS-218ENST00000459667 CD99P14209 185 aa18.04■□□□□ 0.48
VARS-218ENST00000459667 TTKP33981 857 aa18.04■□□□□ 0.48
VARS-218ENST00000459667 CDKN1AP38936 164 aa18.04■□□□□ 0.48
VARS-218ENST00000459667 FABP6P51161 128 aa18.04■□□□□ 0.48
VARS-218ENST00000459667 RPL27P61353 136 aaKnown RBP18.04■□□□□ 0.48
VARS-218ENST00000459667 SEC23BQ15437 767 aa18.04■□□□□ 0.48
VARS-218ENST00000459667 GSG1Q2KHT4 349 aa18.04■□□□□ 0.48
VARS-218ENST00000459667 AGAP6Q5VW22 663 aa18.04■□□□□ 0.48
VARS-218ENST00000459667 ZNF544Q6NX49 715 aa18.04■□□□□ 0.48
VARS-218ENST00000459667 MYPOPQ86VE0 399 aaPredicted RBP18.04■□□□□ 0.48
VARS-218ENST00000459667 ZDHHC21Q8IVQ6 265 aa18.04■□□□□ 0.48
VARS-218ENST00000459667 OR4K5Q8NGD3 323 aa18.04■□□□□ 0.48
VARS-218ENST00000459667 HDAC2Q92769 488 aaKnown RBP18.04■□□□□ 0.48
VARS-218ENST00000459667 SLC7A6OSQ96CW6 309 aaPredicted RBP18.04■□□□□ 0.48
VARS-218ENST00000459667 TMUB1Q9BVT8 246 aa18.04■□□□□ 0.48
VARS-218ENST00000459667 NDEL1Q9GZM8 345 aa18.04■□□□□ 0.48
VARS-218ENST00000459667 MAGIXQ9H6Y5 334 aa18.04■□□□□ 0.48
VARS-218ENST00000459667 TMEM38BQ9NVV0 291 aa18.04■□□□□ 0.48
VARS-218ENST00000459667 B3GNT2Q9NY97 397 aa18.04■□□□□ 0.48
VARS-218ENST00000459667 MED13LQ71F56 2210 aa18.04■□□□□ 0.48
VARS-218ENST00000459667 USF3Q68DE3 2245 aa18.03■□□□□ 0.48
VARS-218ENST00000459667 ENTPD5O75356 428 aa18.03■□□□□ 0.48
VARS-218ENST00000459667 GADD45GO95257 159 aa18.03■□□□□ 0.48
VARS-218ENST00000459667 CD8AP01732 235 aa18.03■□□□□ 0.48
VARS-218ENST00000459667 NR2C1P13056 603 aa18.03■□□□□ 0.48
VARS-218ENST00000459667 ZNF84P51523 738 aa18.03■□□□□ 0.48
VARS-218ENST00000459667 ATP5J2P56134 94 aa18.03■□□□□ 0.48
VARS-218ENST00000459667 MS4A2Q01362 244 aa18.03■□□□□ 0.48
VARS-218ENST00000459667 CHRNB3Q05901 458 aa18.03■□□□□ 0.48
VARS-218ENST00000459667 ZBED5Q49AG3 693 aa18.03■□□□□ 0.48
VARS-218ENST00000459667 FAM98BQ52LJ0 330 aaKnown RBP18.03■□□□□ 0.48
VARS-218ENST00000459667 YTHDF3Q7Z739 585 aaKnown RBP18.03■□□□□ 0.48
VARS-218ENST00000459667 FBXL14Q8N1E6 418 aa18.03■□□□□ 0.48
VARS-218ENST00000459667 SLC22A24Q8N4F4 322 aa18.03■□□□□ 0.48
VARS-218ENST00000459667 TSPAN32Q96QS1 320 aa18.03■□□□□ 0.48
VARS-218ENST00000459667 FUZQ9BT04 418 aa18.03■□□□□ 0.48
VARS-218ENST00000459667 GRIP2Q9C0E4 1043 aa18.03■□□□□ 0.48
VARS-218ENST00000459667 NOX3Q9HBY0 568 aa18.03■□□□□ 0.48
VARS-218ENST00000459667 ZNF224Q9NZL3 707 aa18.03■□□□□ 0.48
VARS-218ENST00000459667 ZNF346Q9UL40 294 aaKnown RBP18.03■□□□□ 0.48
VARS-218ENST00000459667 AURKCQ9UQB9 309 aa18.03■□□□□ 0.48
VARS-218ENST00000459667 UBL3O95164 117 aa18.02■□□□□ 0.48
VARS-218ENST00000459667 FARS2O95363 451 aaKnown RBP18.02■□□□□ 0.48
VARS-218ENST00000459667 OR8G3PP0DMU2 310 aa18.02■□□□□ 0.48
VARS-218ENST00000459667 CALCRP30988 508 aa18.02■□□□□ 0.48
VARS-218ENST00000459667 RPL4P36578 427 aaKnown RBP18.02■□□□□ 0.48
VARS-218ENST00000459667 ACVR1BP36896 505 aa18.02■□□□□ 0.48
VARS-218ENST00000459667 OMPP47874 163 aa18.02■□□□□ 0.48
VARS-218ENST00000459667 LIMS1P48059 325 aa18.02■□□□□ 0.48
VARS-218ENST00000459667 PIGFQ07326 219 aa18.02■□□□□ 0.48
VARS-218ENST00000459667 CD47Q08722 323 aa18.02■□□□□ 0.48
VARS-218ENST00000459667 FAM205BPQ63HN1 556 aa18.02■□□□□ 0.48
VARS-218ENST00000459667 PRSS57Q6UWY2 283 aa18.02■□□□□ 0.48
VARS-218ENST00000459667 MUC15Q8N387 334 aa18.02■□□□□ 0.48
VARS-218ENST00000459667 TRMT61AQ96FX7 289 aaKnown RBP18.02■□□□□ 0.48
VARS-218ENST00000459667 KCNK17Q96T54 332 aa18.02■□□□□ 0.48
VARS-218ENST00000459667 CBLN4Q9NTU7 201 aa18.02■□□□□ 0.48
VARS-218ENST00000459667 TMCC3Q9ULS5 477 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms