RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 MCHR2Q969V1 340 aa21.6■■□□□ 1.05
MSH2-203ENST00000454849 TRMT61AQ96FX7 289 aaKnown RBP21.6■■□□□ 1.05
MSH2-203ENST00000454849 PYURFQ96I23 114 aa21.6■■□□□ 1.05
MSH2-203ENST00000454849 FAM46AQ96IP4 442 aaKnown RBP21.6■■□□□ 1.05
MSH2-203ENST00000454849 NSMCE2Q96MF7 247 aa21.6■■□□□ 1.05
MSH2-203ENST00000454849 ZNF224Q9NZL3 707 aa21.6■■□□□ 1.05
MSH2-203ENST00000454849 HIF3AQ9Y2N7 669 aa21.6■■□□□ 1.05
MSH2-203ENST00000454849 SLC2A10O95528 541 aa21.59■■□□□ 1.05
MSH2-203ENST00000454849 IGKV3-15P01624 115 aa21.59■■□□□ 1.05
MSH2-203ENST00000454849 T-ENOLP0DO92 83 aa21.59■■□□□ 1.05
MSH2-203ENST00000454849 GIPRP48546 466 aa21.59■■□□□ 1.05
MSH2-203ENST00000454849 DAP3P51398 398 aaKnown RBP21.59■■□□□ 1.05
MSH2-203ENST00000454849 HGFACQ04756 655 aa21.59■■□□□ 1.05
MSH2-203ENST00000454849 FMODQ06828 376 aa21.59■■□□□ 1.05
MSH2-203ENST00000454849 SEC23BQ15437 767 aa21.59■■□□□ 1.05
MSH2-203ENST00000454849 FXNQ16595 210 aa21.59■■□□□ 1.05
MSH2-203ENST00000454849 C1QTNF12Q5T7M4 302 aa21.59■■□□□ 1.05
MSH2-203ENST00000454849 PRSS57Q6UWY2 283 aa21.59■■□□□ 1.05
MSH2-203ENST00000454849 Q71RC1 249 aaPredicted RBP21.59■■□□□ 1.05
MSH2-203ENST00000454849 CDK20Q8IZL9 346 aa21.59■■□□□ 1.05
MSH2-203ENST00000454849 NOXO1Q8NFA2 376 aa21.59■■□□□ 1.05
MSH2-203ENST00000454849 FBXO17Q96EF6 278 aa21.59■■□□□ 1.05
MSH2-203ENST00000454849 KATNB1Q9BVA0 655 aa21.59■■□□□ 1.05
MSH2-203ENST00000454849 MRPL13Q9BYD1 178 aaKnown RBP21.59■■□□□ 1.05
MSH2-203ENST00000454849 CBLN4Q9NTU7 201 aa21.59■■□□□ 1.05
MSH2-203ENST00000454849 ZNF346Q9UL40 294 aaKnown RBP21.59■■□□□ 1.05
MSH2-203ENST00000454849 RHCEP18577 417 aa21.58■■□□□ 1.05
MSH2-203ENST00000454849 ARR3P36575 388 aa21.58■■□□□ 1.05
MSH2-203ENST00000454849 ACVR1BP36896 505 aa21.58■■□□□ 1.05
MSH2-203ENST00000454849 MNAT1P51948 309 aa21.58■■□□□ 1.05
MSH2-203ENST00000454849 GSG1Q2KHT4 349 aa21.58■■□□□ 1.05
MSH2-203ENST00000454849 C11orf71Q6IPW1 123 aa21.58■■□□□ 1.05
MSH2-203ENST00000454849 RNF113BQ8IZP6 322 aaKnown RBP21.58■■□□□ 1.05
MSH2-203ENST00000454849 SLC22A24Q8N4F4 322 aa21.58■■□□□ 1.05
MSH2-203ENST00000454849 LRRC75AQ8NAA5 344 aa21.58■■□□□ 1.05
MSH2-203ENST00000454849 OR4K5Q8NGD3 323 aa21.58■■□□□ 1.05
MSH2-203ENST00000454849 NSMAFQ92636 917 aa21.58■■□□□ 1.05
MSH2-203ENST00000454849 TXNIPQ9H3M7 391 aa21.58■■□□□ 1.05
MSH2-203ENST00000454849 TMEM38BQ9NVV0 291 aa21.58■■□□□ 1.05
MSH2-203ENST00000454849 NDE1Q9NXR1 346 aa21.58■■□□□ 1.05
MSH2-203ENST00000454849 IGKV1D-43A0A0B4J1Z2 117 aa21.57■■□□□ 1.04
MSH2-203ENST00000454849 IGHV2OR16-5A0A0B4J2B6 119 aa21.57■■□□□ 1.04
MSH2-203ENST00000454849 PDE5AO76074 875 aa21.57■■□□□ 1.04
MSH2-203ENST00000454849 ZNF26P17031 533 aaPredicted RBP21.57■■□□□ 1.04
MSH2-203ENST00000454849 APOBEC3AP31941 199 aaPredicted RBP21.57■■□□□ 1.04
MSH2-203ENST00000454849 CDAP32320 146 aa21.57■■□□□ 1.04
MSH2-203ENST00000454849 RAB1AP62820 205 aa21.57■■□□□ 1.04
MSH2-203ENST00000454849 ERVK-25P63136 954 aa21.57■■□□□ 1.04
MSH2-203ENST00000454849 HIST3H3Q16695 136 aa21.57■■□□□ 1.04
MSH2-203ENST00000454849 IQCCQ4KMZ1 466 aa21.57■■□□□ 1.04
MSH2-203ENST00000454849 ZNF627Q7L945 461 aa21.57■■□□□ 1.04
MSH2-203ENST00000454849 CCDC36Q8IYA8 594 aa21.57■■□□□ 1.04
MSH2-203ENST00000454849 C18orf12Q96KH6 178 aa21.57■■□□□ 1.04
MSH2-203ENST00000454849 A0A1W2PRQ8 180 aa21.56■■□□□ 1.04
MSH2-203ENST00000454849 TMCC2O75069 709 aa21.56■■□□□ 1.04
MSH2-203ENST00000454849 SEMG1P04279 462 aa21.56■■□□□ 1.04
MSH2-203ENST00000454849 ATP6V1B2P21281 511 aa21.56■■□□□ 1.04
MSH2-203ENST00000454849 RPL27P61353 136 aaKnown RBP21.56■■□□□ 1.04
MSH2-203ENST00000454849 SPIBQ01892 262 aa21.56■■□□□ 1.04
MSH2-203ENST00000454849 CD47Q08722 323 aa21.56■■□□□ 1.04
MSH2-203ENST00000454849 DGCR6Q14129 220 aa21.56■■□□□ 1.04
MSH2-203ENST00000454849 RAB39AQ14964 217 aa21.56■■□□□ 1.04
MSH2-203ENST00000454849 CLEC12BQ2HXU8 276 aa21.56■■□□□ 1.04
MSH2-203ENST00000454849 MST1LQ2TV78 715 aa21.56■■□□□ 1.04
MSH2-203ENST00000454849 ZNF544Q6NX49 715 aa21.56■■□□□ 1.04
MSH2-203ENST00000454849 PIWIL3Q7Z3Z3 882 aaKnown RBP21.56■■□□□ 1.04
MSH2-203ENST00000454849 LRRC18Q8N456 261 aa21.56■■□□□ 1.04
MSH2-203ENST00000454849 FAM169BQ8N8A8 192 aa21.56■■□□□ 1.04
MSH2-203ENST00000454849 TSPAN32Q96QS1 320 aa21.56■■□□□ 1.04
MSH2-203ENST00000454849 CA10Q9NS85 328 aa21.56■■□□□ 1.04
MSH2-203ENST00000454849 IL20RAQ9UHF4 553 aa21.56■■□□□ 1.04
MSH2-203ENST00000454849 ADAM18Q9Y3Q7 739 aa21.56■■□□□ 1.04
MSH2-203ENST00000454849 SETD2Q9BYW2 2564 aaPredicted RBP21.56■■□□□ 1.04
MSH2-203ENST00000454849 H7C1C5 153 aa21.55■■□□□ 1.04
MSH2-203ENST00000454849 SSX4O60224 188 aa21.55■■□□□ 1.04
MSH2-203ENST00000454849 INHBBP09529 407 aa21.55■■□□□ 1.04
MSH2-203ENST00000454849 OR8G3PP0DMU2 310 aa21.55■■□□□ 1.04
MSH2-203ENST00000454849 THBS4P35443 961 aa21.55■■□□□ 1.04
MSH2-203ENST00000454849 RPL4P36578 427 aaKnown RBP21.55■■□□□ 1.04
MSH2-203ENST00000454849 SLC9A3P48764 834 aa21.55■■□□□ 1.04
MSH2-203ENST00000454849 LCN6P62502 163 aa21.55■■□□□ 1.04
MSH2-203ENST00000454849 TNK1Q13470 666 aa21.55■■□□□ 1.04
MSH2-203ENST00000454849 C3orf36Q3SXR2 165 aa21.55■■□□□ 1.04
MSH2-203ENST00000454849 ZBED5Q49AG3 693 aa21.55■■□□□ 1.04
MSH2-203ENST00000454849 KRT80Q6KB66 452 aa21.55■■□□□ 1.04
MSH2-203ENST00000454849 TMPRSS11FQ6ZWK6 438 aa21.55■■□□□ 1.04
MSH2-203ENST00000454849 ZNF75AQ96N20 296 aa21.55■■□□□ 1.04
MSH2-203ENST00000454849 SEPHS2Q99611 448 aa21.55■■□□□ 1.04
MSH2-203ENST00000454849 ANKRD19PQ9H560 264 aa21.55■■□□□ 1.04
MSH2-203ENST00000454849 HTR3EA5X5Y0 456 aa21.54■■□□□ 1.04
MSH2-203ENST00000454849 RAB36O95755 333 aa21.54■■□□□ 1.04
MSH2-203ENST00000454849 OR4A8P0C604 315 aa21.54■■□□□ 1.04
MSH2-203ENST00000454849 ZNF14P17017 642 aaPredicted RBP21.54■■□□□ 1.04
MSH2-203ENST00000454849 ZNF84P51523 738 aa21.54■■□□□ 1.04
MSH2-203ENST00000454849 ADIPOQQ15848 244 aa21.54■■□□□ 1.04
MSH2-203ENST00000454849 MAPK1IP1LQ8NDC0 245 aa21.54■■□□□ 1.04
MSH2-203ENST00000454849 NANOS1Q8WY41 292 aaKnown RBP21.54■■□□□ 1.04
MSH2-203ENST00000454849 MCUR1Q96AQ8 359 aa21.54■■□□□ 1.04
MSH2-203ENST00000454849 CLPTM1LQ96KA5 538 aa21.54■■□□□ 1.04
MSH2-203ENST00000454849 GPA33Q99795 319 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms