RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 DHHO43323 396 aa10.75□□□□□ -0.69
CPSF4-208ENST00000452047 RAB36O95755 333 aa10.75□□□□□ -0.69
CPSF4-208ENST00000452047 BCL10O95999 233 aa10.75□□□□□ -0.69
CPSF4-208ENST00000452047 IGHG1P01857 330 aa10.75□□□□□ -0.69
CPSF4-208ENST00000452047 F13BP05160 661 aa10.75□□□□□ -0.69
CPSF4-208ENST00000452047 QDPRP09417 244 aa10.75□□□□□ -0.69
CPSF4-208ENST00000452047 PATE4P0C8F1 98 aa10.75□□□□□ -0.69
CPSF4-208ENST00000452047 OR8G3PP0DMU2 310 aa10.75□□□□□ -0.69
CPSF4-208ENST00000452047 ZNF16P17020 682 aaPredicted RBP10.75□□□□□ -0.69
CPSF4-208ENST00000452047 FUT1P19526 365 aa10.75□□□□□ -0.69
CPSF4-208ENST00000452047 FUT4P22083 530 aa10.75□□□□□ -0.69
CPSF4-208ENST00000452047 ZNF133P52736 654 aaPredicted RBP10.75□□□□□ -0.69
CPSF4-208ENST00000452047 SELENOWP63302 87 aa10.75□□□□□ -0.69
CPSF4-208ENST00000452047 LSM11P83369 360 aaKnown RBP eCLIP10.75□□□□□ -0.69
CPSF4-208ENST00000452047 GGTLC2Q14390 218 aa10.75□□□□□ -0.69
CPSF4-208ENST00000452047 RAB39AQ14964 217 aa10.75□□□□□ -0.69
CPSF4-208ENST00000452047 FXNQ16595 210 aa10.75□□□□□ -0.69
CPSF4-208ENST00000452047 NRN1LQ496H8 165 aa10.75□□□□□ -0.69
CPSF4-208ENST00000452047 SLC15A3Q8IY34 581 aa10.75□□□□□ -0.69
CPSF4-208ENST00000452047 NOXO1Q8NFA2 376 aa10.75□□□□□ -0.69
CPSF4-208ENST00000452047 MRPL24Q96A35 216 aaKnown RBP10.75□□□□□ -0.69
CPSF4-208ENST00000452047 SGTBQ96EQ0 304 aa10.75□□□□□ -0.69
CPSF4-208ENST00000452047 ZNF347Q96SE7 839 aa10.75□□□□□ -0.69
CPSF4-208ENST00000452047 MRPL37Q9BZE1 423 aaKnown RBP10.75□□□□□ -0.69
CPSF4-208ENST00000452047 BPESC1Q9GZL8 116 aa10.75□□□□□ -0.69
CPSF4-208ENST00000452047 RAB1BQ9H0U4 201 aa10.75□□□□□ -0.69
CPSF4-208ENST00000452047 FBXL3Q9UKT7 428 aa10.75□□□□□ -0.69
CPSF4-208ENST00000452047 A4GNTQ9UNA3 340 aa10.75□□□□□ -0.69
CPSF4-208ENST00000452047 CMAHPQ9Y471 501 aa10.75□□□□□ -0.69
CPSF4-208ENST00000452047 A0A1W2PRG6 482 aa10.74□□□□□ -0.69
CPSF4-208ENST00000452047 NPIPB13A6NJU9 1138 aa10.74□□□□□ -0.69
CPSF4-208ENST00000452047 CENPBD1B2RD01 187 aa10.74□□□□□ -0.69
CPSF4-208ENST00000452047 NPIPB4C9JG80 1138 aa10.74□□□□□ -0.69
CPSF4-208ENST00000452047 PIP5K1CO60331 668 aa10.74□□□□□ -0.69
CPSF4-208ENST00000452047 ENTPD5O75356 428 aa10.74□□□□□ -0.69
CPSF4-208ENST00000452047 SERPINA5P05154 406 aa10.74□□□□□ -0.69
CPSF4-208ENST00000452047 GIFP27352 417 aa10.74□□□□□ -0.69
CPSF4-208ENST00000452047 GLRXP35754 106 aa10.74□□□□□ -0.69
CPSF4-208ENST00000452047 MDH1P40925 334 aaKnown RBP10.74□□□□□ -0.69
CPSF4-208ENST00000452047 AQP2P41181 271 aa10.74□□□□□ -0.69
CPSF4-208ENST00000452047 EVX1P49640 407 aa10.74□□□□□ -0.69
CPSF4-208ENST00000452047 DAP3P51398 398 aaKnown RBP10.74□□□□□ -0.69
CPSF4-208ENST00000452047 CLRN1P58418 232 aa10.74□□□□□ -0.69
CPSF4-208ENST00000452047 CHRFAM7AQ494W8 412 aa10.74□□□□□ -0.69
CPSF4-208ENST00000452047 ARMC4Q5T2S8 1044 aa10.74□□□□□ -0.69
CPSF4-208ENST00000452047 C8orf82Q6P1X6 216 aaPredicted RBP10.74□□□□□ -0.69
CPSF4-208ENST00000452047 ARPINQ7Z6K5 226 aa10.74□□□□□ -0.69
CPSF4-208ENST00000452047 VTCN1Q7Z7D3 282 aa10.74□□□□□ -0.69
CPSF4-208ENST00000452047 OR4K5Q8NGD3 323 aa10.74□□□□□ -0.69
CPSF4-208ENST00000452047 MOSPD2Q8NHP6 518 aa10.74□□□□□ -0.69
CPSF4-208ENST00000452047 RP9Q8TA86 221 aaKnown RBP10.74□□□□□ -0.69
CPSF4-208ENST00000452047 NEU4Q8WWR8 484 aaPredicted RBP10.74□□□□□ -0.69
CPSF4-208ENST00000452047 MCHR2Q969V1 340 aa10.74□□□□□ -0.69
CPSF4-208ENST00000452047 NMD3Q96D46 503 aaKnown RBP10.74□□□□□ -0.69
CPSF4-208ENST00000452047 TPD52L3Q96J77 140 aa10.74□□□□□ -0.69
CPSF4-208ENST00000452047 PRRC1Q96M27 445 aa10.74□□□□□ -0.69
CPSF4-208ENST00000452047 SH3GL3Q99963 347 aa10.74□□□□□ -0.69
CPSF4-208ENST00000452047 DYNLRB1Q9NP97 96 aa10.74□□□□□ -0.69
CPSF4-208ENST00000452047 MED4Q9NPJ6 270 aa10.74□□□□□ -0.69
CPSF4-208ENST00000452047 INIPQ9NRY2 104 aa10.74□□□□□ -0.69
CPSF4-208ENST00000452047 MAN2C1Q9NTJ4 1040 aa10.74□□□□□ -0.69
CPSF4-208ENST00000452047 TMEM160Q9NX00 188 aa10.74□□□□□ -0.69
CPSF4-208ENST00000452047 MED31Q9Y3C7 131 aa10.74□□□□□ -0.69
CPSF4-208ENST00000452047 STAB1Q9NY15 2570 aa10.74□□□□□ -0.69
CPSF4-208ENST00000452047 SH3PXD2BA1X283 911 aa10.73□□□□□ -0.69
CPSF4-208ENST00000452047 MCIDASD6RGH6 385 aa10.73□□□□□ -0.69
CPSF4-208ENST00000452047 NME4O00746 187 aa10.73□□□□□ -0.69
CPSF4-208ENST00000452047 SYNGR3O43761 229 aa10.73□□□□□ -0.69
CPSF4-208ENST00000452047 TRMUO75648 421 aaKnown RBP10.73□□□□□ -0.69
CPSF4-208ENST00000452047 STAMBPO95630 424 aa10.73□□□□□ -0.69
CPSF4-208ENST00000452047 ADRA2AP08913 450 aa10.73□□□□□ -0.69
CPSF4-208ENST00000452047 COX4I1P13073 169 aa10.73□□□□□ -0.69
CPSF4-208ENST00000452047 DAOP14920 347 aa10.73□□□□□ -0.69
CPSF4-208ENST00000452047 ACADSP16219 412 aa10.73□□□□□ -0.69
CPSF4-208ENST00000452047 GZMKP49863 264 aa10.73□□□□□ -0.69
CPSF4-208ENST00000452047 MYBPC1Q00872 1141 aa10.73□□□□□ -0.69
CPSF4-208ENST00000452047 ST3GAL3Q11203 375 aa10.73□□□□□ -0.69
CPSF4-208ENST00000452047 CARTPTQ16568 116 aa10.73□□□□□ -0.69
CPSF4-208ENST00000452047 HSP90B2PQ58FF3 399 aa10.73□□□□□ -0.69
CPSF4-208ENST00000452047 C10orf128Q5T292 105 aa10.73□□□□□ -0.69
CPSF4-208ENST00000452047 CYB5R2Q6BCY4 276 aa10.73□□□□□ -0.69
CPSF4-208ENST00000452047 HDDC2Q7Z4H3 204 aa10.73□□□□□ -0.69
CPSF4-208ENST00000452047 TREML1Q86YW5 311 aa10.73□□□□□ -0.69
CPSF4-208ENST00000452047 OFCC1Q8IZS5 231 aa10.73□□□□□ -0.69
CPSF4-208ENST00000452047 ZNF786Q8N393 782 aa10.73□□□□□ -0.69
CPSF4-208ENST00000452047 PAQR4Q8N4S7 273 aaPredicted RBP10.73□□□□□ -0.69
CPSF4-208ENST00000452047 SYT14Q8NB59 555 aa10.73□□□□□ -0.69
CPSF4-208ENST00000452047 MSI2Q96DH6 328 aaKnown RBP10.73□□□□□ -0.69
CPSF4-208ENST00000452047 MYEF2Q9P2K5 600 aaKnown RBP10.73□□□□□ -0.69
CPSF4-208ENST00000452047 SLC7A8Q9UHI5 535 aa10.73□□□□□ -0.69
CPSF4-208ENST00000452047 CDC42EP3Q9UKI2 254 aa10.73□□□□□ -0.69
CPSF4-208ENST00000452047 HIF3AQ9Y2N7 669 aa10.73□□□□□ -0.69
CPSF4-208ENST00000452047 AP3M1Q9Y2T2 418 aa10.73□□□□□ -0.69
CPSF4-208ENST00000452047 SPEF1Q9Y4P9 236 aa10.73□□□□□ -0.69
CPSF4-208ENST00000452047 SNX13Q9Y5W8 968 aa10.73□□□□□ -0.69
CPSF4-208ENST00000452047 IGKV1D-43A0A0B4J1Z2 117 aa10.72□□□□□ -0.69
CPSF4-208ENST00000452047 J3KTA2 159 aa10.72□□□□□ -0.69
CPSF4-208ENST00000452047 M0R233 179 aa10.72□□□□□ -0.69
CPSF4-208ENST00000452047 FFAR1O14842 300 aa10.72□□□□□ -0.69
CPSF4-208ENST00000452047 ATP8B1O43520 1251 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms