RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 GFRA1P56159 465 aa12.74□□□□□ -0.37
USP39-207ENST00000450066 RPS25P62851 125 aaKnown RBP12.74□□□□□ -0.37
USP39-207ENST00000450066 GLO1Q04760 184 aa12.74□□□□□ -0.37
USP39-207ENST00000450066 CDC20Q12834 499 aa12.74□□□□□ -0.37
USP39-207ENST00000450066 DNM1P34Q6PK57 102 aa12.74□□□□□ -0.37
USP39-207ENST00000450066 ESPNLQ6ZVH7 1005 aa12.74□□□□□ -0.37
USP39-207ENST00000450066 GGNQ86UU5 652 aa12.74□□□□□ -0.37
USP39-207ENST00000450066 WDFY1Q8IWB7 410 aa12.74□□□□□ -0.37
USP39-207ENST00000450066 SYT14Q8NB59 555 aa12.74□□□□□ -0.37
USP39-207ENST00000450066 ZFAND2BQ8WV99 257 aa12.74□□□□□ -0.37
USP39-207ENST00000450066 TRMT61AQ96FX7 289 aaKnown RBP12.74□□□□□ -0.37
USP39-207ENST00000450066 COQ7Q99807 217 aa12.74□□□□□ -0.37
USP39-207ENST00000450066 MRPL13Q9BYD1 178 aaKnown RBP12.74□□□□□ -0.37
USP39-207ENST00000450066 TTTY12Q9BZ98 90 aa12.74□□□□□ -0.37
USP39-207ENST00000450066 WDR76Q9H967 626 aa12.74□□□□□ -0.37
USP39-207ENST00000450066 KLHL13Q9P2N7 655 aa12.74□□□□□ -0.37
USP39-207ENST00000450066 NCKAP5O14513 1909 aa12.73□□□□□ -0.37
USP39-207ENST00000450066 TNFSF11O14788 317 aa12.73□□□□□ -0.37
USP39-207ENST00000450066 RAMP1O60894 148 aa12.73□□□□□ -0.37
USP39-207ENST00000450066 CD53P19397 219 aa12.73□□□□□ -0.37
USP39-207ENST00000450066 SERPINB10P48595 397 aa12.73□□□□□ -0.37
USP39-207ENST00000450066 CLDN20P56880 219 aa12.73□□□□□ -0.37
USP39-207ENST00000450066 RAC3P60763 192 aa12.73□□□□□ -0.37
USP39-207ENST00000450066 ARG2P78540 354 aa12.73□□□□□ -0.37
USP39-207ENST00000450066 RSPO4Q2I0M5 234 aaPredicted RBP12.73□□□□□ -0.37
USP39-207ENST00000450066 TP53I3Q53FA7 332 aa12.73□□□□□ -0.37
USP39-207ENST00000450066 VASNQ6EMK4 673 aa12.73□□□□□ -0.37
USP39-207ENST00000450066 ASB18Q6ZVZ8 466 aa12.73□□□□□ -0.37
USP39-207ENST00000450066 GALNTL5Q7Z4T8 443 aa12.73□□□□□ -0.37
USP39-207ENST00000450066 OR6X1Q8NH79 312 aa12.73□□□□□ -0.37
USP39-207ENST00000450066 TBC1D15Q8TC07 691 aa12.73□□□□□ -0.37
USP39-207ENST00000450066 SLC25A44Q96H78 314 aaPredicted RBP12.73□□□□□ -0.37
USP39-207ENST00000450066 TM9SF2Q99805 663 aa12.73□□□□□ -0.37
USP39-207ENST00000450066 EMC6Q9BV81 110 aa12.73□□□□□ -0.37
USP39-207ENST00000450066 TXNL4BQ9NX01 149 aaKnown RBP12.73□□□□□ -0.37
USP39-207ENST00000450066 SIRT4Q9Y6E7 314 aaPredicted RBP12.73□□□□□ -0.37
USP39-207ENST00000450066 TMEM14AQ9Y6G1 99 aa12.73□□□□□ -0.37
USP39-207ENST00000450066 LOC400499M0QZD8 3231 aa12.73□□□□□ -0.37
USP39-207ENST00000450066 E9PI62 339 aa12.73□□□□□ -0.37
USP39-207ENST00000450066 PLPP2O43688 288 aa12.73□□□□□ -0.37
USP39-207ENST00000450066 GLSO94925 669 aaPredicted RBP12.73□□□□□ -0.37
USP39-207ENST00000450066 HLA-DQA2P01906 255 aa12.73□□□□□ -0.37
USP39-207ENST00000450066 HLA-DPB1P04440 258 aa12.73□□□□□ -0.37
USP39-207ENST00000450066 KLK2P20151 261 aa12.73□□□□□ -0.37
USP39-207ENST00000450066 GALP22466 123 aa12.73□□□□□ -0.37
USP39-207ENST00000450066 FGF9P31371 208 aaPredicted RBP12.73□□□□□ -0.37
USP39-207ENST00000450066 CD97P48960 835 aa12.73□□□□□ -0.37
USP39-207ENST00000450066 CCL11P51671 97 aa12.73□□□□□ -0.37
USP39-207ENST00000450066 POU4F3Q15319 338 aa12.73□□□□□ -0.37
USP39-207ENST00000450066 ETFDHQ16134 617 aa12.73□□□□□ -0.37
USP39-207ENST00000450066 HYAL4Q2M3T9 481 aa12.73□□□□□ -0.37
USP39-207ENST00000450066 ZNF684Q5T5D7 378 aa12.73□□□□□ -0.37
USP39-207ENST00000450066 KCTD20Q7Z5Y7 419 aa12.73□□□□□ -0.37
USP39-207ENST00000450066 PELI1Q96FA3 418 aa12.73□□□□□ -0.37
USP39-207ENST00000450066 SCMH1Q96GD3 660 aa12.73□□□□□ -0.37
USP39-207ENST00000450066 DACH2Q96NX9 599 aa12.73□□□□□ -0.37
USP39-207ENST00000450066 RBP7Q96R05 134 aa12.73□□□□□ -0.37
USP39-207ENST00000450066 SLIRPQ9GZT3 109 aaKnown RBP12.73□□□□□ -0.37
USP39-207ENST00000450066 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.73□□□□□ -0.37
USP39-207ENST00000450066 TRDV1A0A1B0GX56 115 aa12.72□□□□□ -0.37
USP39-207ENST00000450066 DCDC2BA2VCK2 349 aa12.72□□□□□ -0.37
USP39-207ENST00000450066 SLC35F4A4IF30 521 aa12.72□□□□□ -0.37
USP39-207ENST00000450066 EIF1AYO14602 144 aaKnown RBP12.72□□□□□ -0.37
USP39-207ENST00000450066 LRRTM2O43300 516 aa12.72□□□□□ -0.37
USP39-207ENST00000450066 GPANK1O95872 356 aa12.72□□□□□ -0.37
USP39-207ENST00000450066 IGHG1P01857 330 aa12.72□□□□□ -0.37
USP39-207ENST00000450066 POU3F2P20265 443 aaPredicted RBP12.72□□□□□ -0.37
USP39-207ENST00000450066 ALOX5APP20292 161 aa12.72□□□□□ -0.37
USP39-207ENST00000450066 PTGS2P35354 604 aa12.72□□□□□ -0.37
USP39-207ENST00000450066 RFC3P40938 356 aa12.72□□□□□ -0.37
USP39-207ENST00000450066 GBX2P52951 348 aaPredicted RBP12.72□□□□□ -0.37
USP39-207ENST00000450066 CARD18P57730 90 aa12.72□□□□□ -0.37
USP39-207ENST00000450066 FABP5Q01469 135 aa12.72□□□□□ -0.37
USP39-207ENST00000450066 THEM4Q5T1C6 240 aa12.72□□□□□ -0.37
USP39-207ENST00000450066 HBMQ6B0K9 141 aa12.72□□□□□ -0.37
USP39-207ENST00000450066 DPY19L4Q7Z388 723 aa12.72□□□□□ -0.37
USP39-207ENST00000450066 OR6N2Q8NGY6 317 aa12.72□□□□□ -0.37
USP39-207ENST00000450066 ADGRG7Q96K78 797 aa12.72□□□□□ -0.37
USP39-207ENST00000450066 ADAD1Q96M93 576 aaKnown RBP12.72□□□□□ -0.37
USP39-207ENST00000450066 TMED9Q9BVK6 235 aa12.72□□□□□ -0.37
USP39-207ENST00000450066 TTTY10Q9BZA0 68 aa12.72□□□□□ -0.37
USP39-207ENST00000450066 SIAEQ9HAT2 523 aa12.72□□□□□ -0.37
USP39-207ENST00000450066 LAMP5Q9UJQ1 280 aa12.72□□□□□ -0.37
USP39-207ENST00000450066 GNG8Q9UK08 70 aa12.72□□□□□ -0.37
USP39-207ENST00000450066 COA3Q9Y2R0 106 aaPredicted RBP12.72□□□□□ -0.37
USP39-207ENST00000450066 PMF1-BGLAPU3KQ54 211 aa12.72□□□□□ -0.37
USP39-207ENST00000450066 DCHS1Q96JQ0 3298 aa12.72□□□□□ -0.37
USP39-207ENST00000450066 FREM3P0C091 2139 aa12.72□□□□□ -0.37
USP39-207ENST00000450066 H0YC42 278 aa12.71□□□□□ -0.37
USP39-207ENST00000450066 PHYHO14832 338 aa12.71□□□□□ -0.37
USP39-207ENST00000450066 MAGEB4O15481 346 aaPredicted RBP12.71□□□□□ -0.37
USP39-207ENST00000450066 PGA4P0DJD7 388 aa12.71□□□□□ -0.37
USP39-207ENST00000450066 PGA3P0DJD8 388 aa12.71□□□□□ -0.37
USP39-207ENST00000450066 MEOX1P50221 254 aa12.71□□□□□ -0.37
USP39-207ENST00000450066 FMODQ06828 376 aa12.71□□□□□ -0.37
USP39-207ENST00000450066 CCDC58Q4VC31 144 aa12.71□□□□□ -0.37
USP39-207ENST00000450066 DMKNQ6E0U4 476 aaPredicted RBP12.71□□□□□ -0.37
USP39-207ENST00000450066 IGFL2Q6UWQ7 119 aa12.71□□□□□ -0.37
USP39-207ENST00000450066 PLEKHG7Q6ZR37 379 aa12.71□□□□□ -0.37
USP39-207ENST00000450066 LINC00299Q6ZSB3 139 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms