RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 EIF3IQ13347 325 aaKnown RBP10.57□□□□□ -0.72
SMAD3-202ENST00000439724 SSPNQ14714 243 aa10.57□□□□□ -0.72
SMAD3-202ENST00000439724 SF3A2Q15428 464 aaKnown RBP10.57□□□□□ -0.72
SMAD3-202ENST00000439724 ZNF239Q16600 458 aaKnown RBP10.57□□□□□ -0.72
SMAD3-202ENST00000439724 BAK1Q16611 211 aa10.57□□□□□ -0.72
SMAD3-202ENST00000439724 CCDC157Q569K6 752 aa10.57□□□□□ -0.72
SMAD3-202ENST00000439724 FDX2Q6P4F2 183 aa10.57□□□□□ -0.72
SMAD3-202ENST00000439724 NHLRC1Q6VVB1 395 aa10.57□□□□□ -0.72
SMAD3-202ENST00000439724 SLC35D2Q76EJ3 337 aa10.57□□□□□ -0.72
SMAD3-202ENST00000439724 RELTQ969Z4 430 aa10.57□□□□□ -0.72
SMAD3-202ENST00000439724 MAP6Q96JE9 813 aa10.57□□□□□ -0.72
SMAD3-202ENST00000439724 C5orf34Q96MH7 638 aa10.57□□□□□ -0.72
SMAD3-202ENST00000439724 OR14A2Q96R54 314 aa10.57□□□□□ -0.72
SMAD3-202ENST00000439724 OR8B4Q96RC9 309 aa10.57□□□□□ -0.72
SMAD3-202ENST00000439724 KCNK17Q96T54 332 aa10.57□□□□□ -0.72
SMAD3-202ENST00000439724 CDC6Q99741 560 aa10.57□□□□□ -0.72
SMAD3-202ENST00000439724 ZCCHC4Q9H5U6 513 aa10.57□□□□□ -0.72
SMAD3-202ENST00000439724 PPP1R3EQ9H7J1 279 aa10.57□□□□□ -0.72
SMAD3-202ENST00000439724 KLHL13Q9P2N7 655 aa10.57□□□□□ -0.72
SMAD3-202ENST00000439724 TBC1D24Q9ULP9 559 aa10.57□□□□□ -0.72
SMAD3-202ENST00000439724 FARSAQ9Y285 508 aaKnown RBP10.57□□□□□ -0.72
SMAD3-202ENST00000439724 RPH3AQ9Y2J0 694 aaPredicted RBP10.57□□□□□ -0.72
SMAD3-202ENST00000439724 LAMA1P25391 3075 aa10.57□□□□□ -0.72
SMAD3-202ENST00000439724 CCDC187A0A096LP49 1063 aa10.56□□□□□ -0.72
SMAD3-202ENST00000439724 C9orf172C9J069 976 aa10.56□□□□□ -0.72
SMAD3-202ENST00000439724 TMCC2O75069 709 aa10.56□□□□□ -0.72
SMAD3-202ENST00000439724 GPANK1O95872 356 aa10.56□□□□□ -0.72
SMAD3-202ENST00000439724 HLA-DQA2P01906 255 aa10.56□□□□□ -0.72
SMAD3-202ENST00000439724 APOA1P02647 267 aa10.56□□□□□ -0.72
SMAD3-202ENST00000439724 OTX2P32243 289 aa10.56□□□□□ -0.72
SMAD3-202ENST00000439724 OR10A3P58181 314 aa10.56□□□□□ -0.72
SMAD3-202ENST00000439724 RPS18P62269 152 aaKnown RBP10.56□□□□□ -0.72
SMAD3-202ENST00000439724 POU3F1Q03052 451 aaPredicted RBP10.56□□□□□ -0.72
SMAD3-202ENST00000439724 GLO1Q04760 184 aa10.56□□□□□ -0.72
SMAD3-202ENST00000439724 HSD17B12Q53GQ0 312 aa10.56□□□□□ -0.72
SMAD3-202ENST00000439724 SLC22A10Q63ZE4 541 aa10.56□□□□□ -0.72
SMAD3-202ENST00000439724 SLC18B1Q6NT16 456 aa10.56□□□□□ -0.72
SMAD3-202ENST00000439724 LRRC28Q86X40 367 aaPredicted RBP10.56□□□□□ -0.72
SMAD3-202ENST00000439724 KDM8Q8N371 416 aa10.56□□□□□ -0.72
SMAD3-202ENST00000439724 GTPBP8Q8N3Z3 284 aaPredicted RBP10.56□□□□□ -0.72
SMAD3-202ENST00000439724 TMEM156Q8N614 296 aa10.56□□□□□ -0.72
SMAD3-202ENST00000439724 ZNF454Q8N9F8 522 aa10.56□□□□□ -0.72
SMAD3-202ENST00000439724 THEM6Q8WUY1 208 aa10.56□□□□□ -0.72
SMAD3-202ENST00000439724 SNRNP27Q8WVK2 155 aaKnown RBP10.56□□□□□ -0.72
SMAD3-202ENST00000439724 HSD17B8Q92506 261 aa10.56□□□□□ -0.72
SMAD3-202ENST00000439724 RGP1Q92546 391 aaPredicted RBP10.56□□□□□ -0.72
SMAD3-202ENST00000439724 EDEM2Q9BV94 578 aa10.56□□□□□ -0.72
SMAD3-202ENST00000439724 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.56□□□□□ -0.72
SMAD3-202ENST00000439724 TSPAN10Q9H1Z9 355 aaPredicted RBP10.56□□□□□ -0.72
SMAD3-202ENST00000439724 PROK2Q9HC23 129 aa10.56□□□□□ -0.72
SMAD3-202ENST00000439724 HPF1Q9NWY4 346 aa10.56□□□□□ -0.72
SMAD3-202ENST00000439724 B3GAT1Q9P2W7 334 aa10.56□□□□□ -0.72
SMAD3-202ENST00000439724 KCNG2Q9UJ96 466 aa10.56□□□□□ -0.72
SMAD3-202ENST00000439724 IKZF2Q9UKS7 526 aa10.56□□□□□ -0.72
SMAD3-202ENST00000439724 HDGFL3Q9Y3E1 203 aa10.56□□□□□ -0.72
SMAD3-202ENST00000439724 PCDHGA1Q9Y5H4 931 aa10.56□□□□□ -0.72
SMAD3-202ENST00000439724 NCOR1O75376 2440 aa10.55□□□□□ -0.72
SMAD3-202ENST00000439724 ARPC4-TTLL3A0A0A6YYG9 625 aa10.55□□□□□ -0.72
SMAD3-202ENST00000439724 TRBV5-5A0A0J9YX44 114 aa10.55□□□□□ -0.72
SMAD3-202ENST00000439724 OR4C45A6NMZ5 311 aa10.55□□□□□ -0.72
SMAD3-202ENST00000439724 NOTOA8MTQ0 251 aa10.55□□□□□ -0.72
SMAD3-202ENST00000439724 ZNF593O00488 134 aaPredicted RBP10.55□□□□□ -0.72
SMAD3-202ENST00000439724 PIN1P1O15428 100 aa10.55□□□□□ -0.72
SMAD3-202ENST00000439724 GALR2O43603 387 aaPredicted RBP10.55□□□□□ -0.72
SMAD3-202ENST00000439724 ZNF432O94892 652 aa10.55□□□□□ -0.72
SMAD3-202ENST00000439724 RPP14O95059 124 aaKnown RBP10.55□□□□□ -0.72
SMAD3-202ENST00000439724 MT-CO3P00414 261 aa10.55□□□□□ -0.72
SMAD3-202ENST00000439724 CSF3P09919 207 aa10.55□□□□□ -0.72
SMAD3-202ENST00000439724 LIFP15018 202 aa10.55□□□□□ -0.72
SMAD3-202ENST00000439724 APEX1P27695 318 aaKnown RBP10.55□□□□□ -0.72
SMAD3-202ENST00000439724 P2RY4P51582 365 aa10.55□□□□□ -0.72
SMAD3-202ENST00000439724 ROM1Q03395 351 aa10.55□□□□□ -0.72
SMAD3-202ENST00000439724 SCN1BQ07699 218 aa10.55□□□□□ -0.72
SMAD3-202ENST00000439724 ETFDHQ16134 617 aa10.55□□□□□ -0.72
SMAD3-202ENST00000439724 CEP78Q5JTW2 689 aa10.55□□□□□ -0.72
SMAD3-202ENST00000439724 H3F3CQ6NXT2 135 aa10.55□□□□□ -0.72
SMAD3-202ENST00000439724 GDPD3Q7L5L3 318 aa10.55□□□□□ -0.72
SMAD3-202ENST00000439724 ESX1Q8N693 406 aa10.55□□□□□ -0.72
SMAD3-202ENST00000439724 SLC26A10Q8NG04 563 aa10.55□□□□□ -0.72
SMAD3-202ENST00000439724 OR2G2Q8NGZ5 317 aa10.55□□□□□ -0.72
SMAD3-202ENST00000439724 OR5AK2Q8NH90 309 aa10.55□□□□□ -0.72
SMAD3-202ENST00000439724 HTRA1Q92743 480 aa10.55□□□□□ -0.72
SMAD3-202ENST00000439724 TMEM41AQ96HV5 264 aa10.55□□□□□ -0.72
SMAD3-202ENST00000439724 SGCZQ96LD1 299 aa10.55□□□□□ -0.72
SMAD3-202ENST00000439724 DERL3Q96Q80 235 aa10.55□□□□□ -0.72
SMAD3-202ENST00000439724 AMELYQ99218 206 aa10.55□□□□□ -0.72
SMAD3-202ENST00000439724 TMEM9BQ9NQ34 198 aa10.55□□□□□ -0.72
SMAD3-202ENST00000439724 TIGARQ9NQ88 270 aa10.55□□□□□ -0.72
SMAD3-202ENST00000439724 SLCO1C1Q9NYB5 712 aa10.55□□□□□ -0.72
SMAD3-202ENST00000439724 FRRS1LQ9P0K9 344 aa10.55□□□□□ -0.72
SMAD3-202ENST00000439724 RASD1Q9Y272 281 aa10.55□□□□□ -0.72
SMAD3-202ENST00000439724 SDK2Q58EX2 2172 aa10.55□□□□□ -0.72
SMAD3-202ENST00000439724 A0A1W2PNU3 283 aaPredicted RBP10.54□□□□□ -0.72
SMAD3-202ENST00000439724 A0A1W2PQ09 198 aa10.54□□□□□ -0.72
SMAD3-202ENST00000439724 TMEM212A6NML5 194 aa10.54□□□□□ -0.72
SMAD3-202ENST00000439724 TMEM127O75204 238 aa10.54□□□□□ -0.72
SMAD3-202ENST00000439724 KHDRBS3O75525 346 aaKnown RBP10.54□□□□□ -0.72
SMAD3-202ENST00000439724 HLA-DQB1P01920 261 aa10.54□□□□□ -0.72
SMAD3-202ENST00000439724 SPARCP09486 303 aa10.54□□□□□ -0.72
SMAD3-202ENST00000439724 EPXP11678 715 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms