RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 ZNF99A8MXY4 864 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 SHISA9B4DS77 424 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 E7EQL1 145 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 RPL36A-HNRNPH2H7BZ11 118 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 H7C1C5 153 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 TNFRSF11BO00300 401 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 TMPRSS2O15393 492 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 ARHGEF9O43307 516 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 OR10H3O60404 316 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 FZD7O75084 574 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 PTP4A3O75365 173 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 DNAJC8O75937 253 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 GOSR1O95249 250 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 SLC2A10O95528 541 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 HLA-HP01893 362 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 SEMG1P04279 462 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 CELA3BP08861 270 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 CD53P19397 219 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 CD40P25942 277 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 CDKN1AP38936 164 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 PTDSS1P48651 473 aaKnown RBP5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 SLC9A3P48764 834 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 RPL27P61353 136 aaKnown RBP5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 LCN6P62502 163 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 NKX6-1P78426 367 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 CBX1P83916 185 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 CHRNB3Q05901 458 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 FMODQ06828 376 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 NPRL3Q12980 569 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 FHL1Q13642 323 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 SGCAQ16586 387 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 FXNQ16595 210 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 DEFB113Q30KQ7 82 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 SPATS1Q496A3 300 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 TMEM108Q6UXF1 575 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 PAMR1Q6UXH9 720 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 ZNF813Q6ZN06 617 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 Q6ZS46 218 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 TMPRSS11FQ6ZWK6 438 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 MDP1Q86V88 176 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 SKA3Q8IX90 412 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 ARHGAP24Q8N264 748 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 LRRC18Q8N456 261 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 LRRC75AQ8NAA5 344 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 OR4K5Q8NGD3 323 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 SMAP2Q8WU79 429 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 LIPHQ8WWY8 451 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 NSMAFQ92636 917 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 HDAC2Q92769 488 aaKnown RBP5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 LRR1Q96L50 414 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 FOXN4Q96NZ1 517 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 TSPAN32Q96QS1 320 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 RBP7Q96R05 134 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 CCL19Q99731 98 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 FOXB1Q99853 325 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 SH3GL3Q99963 347 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 TXNIPQ9H3M7 391 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 NELFAQ9H3P2 528 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 RERGLQ9H628 205 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 RNF121Q9H920 327 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 SEC61A2Q9H9S3 476 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 IL1RAPQ9NPH3 570 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 GRHPRQ9UBQ7 328 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 PRPF19Q9UMS4 504 aaKnown RBP5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 MOKQ9UQ07 419 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 U3KQV3 271 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 PRR14LQ5THK1 2151 aa5.03□□□□□ -1.6
HMGB3P24-201ENST00000433260 PTPN13Q12923 2485 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 RAI1Q7Z5J4 1906 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 IGKV1D-43A0A0B4J1Z2 117 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 A0A1W2PPL8 197 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 A0A1W2PRQ8 180 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 SH3PXD2BA1X283 911 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 HTR3EA5X5Y0 456 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 ATP6V1G2-DDX39BF2Z307 99 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 SOCS2O14508 198 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 GNGT2O14610 69 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 ACOT8O14734 319 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 HS3ST1O14792 307 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 DHHO43323 396 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 SMPD2O60906 423 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 NDUFB2O95178 105 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 IGF2P01344 180 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 GASTP01350 101 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 IGHG1P01857 330 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 SOD3P08294 240 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 TSPAN19P0C672 248 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 PGA4P0DJD7 388 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 PGA3P0DJD8 388 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 CCL2P13500 99 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 CBR1P16152 277 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 ZNF26P17031 533 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 PTAFRP25105 342 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 CDAP32320 146 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 ARR3P36575 388 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 OMPP47874 163 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 GIPRP48546 466 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 CENPAP49450 140 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 FABP6P51161 128 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 DAP3P51398 398 aaKnown RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms