RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 TRAV27A0A087WT01 109 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 IGHV1-18A0A0C4DH31 117 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 A6NIZ1 184 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 NPIPB13A6NJU9 1138 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 VSTM5A8MXK1 200 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 NPIPB4C9JG80 1138 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 E7EQL1 145 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 IGKV3-15P01624 115 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 TSPAN19P0C672 248 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 CECR9P0C854 216 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 OR8G3PP0DMU2 310 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 PAX1P15863 534 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 ACADSP16219 412 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 RPL4P36578 427 aaKnown RBP9.53□□□□□ -0.88
USP49-204ENST00000423567 GPR4P46093 362 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 CTXN1P60606 82 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 RAP1BP61224 184 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 RAP1AP62834 184 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 VLDLRP98155 873 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 SPIBQ01892 262 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 NAAAQ02083 359 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 CHRNB3Q05901 458 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 CD47Q08722 323 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 GSG1Q2KHT4 349 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 PODNL1Q6PEZ8 512 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 TMPRSS11FQ6ZWK6 438 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 YTHDF3Q7Z739 585 aaKnown RBP9.53□□□□□ -0.88
USP49-204ENST00000423567 DPPA2Q7Z7J5 298 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 DTX2Q86UW9 622 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 MDP1Q86V88 176 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 DHFR2Q86XF0 187 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 FAM86B1Q8N7N1 296 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 SYT14Q8NB59 555 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 OR4F15Q8NGB8 312 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 OR13C2Q8NGS9 318 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 OR52J3Q8NH60 311 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 FNDC8Q8TC99 324 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 SLC7A13Q8TCU3 470 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 IGFBPL1Q8WX77 278 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 POP5Q969H6 163 aaKnown RBP9.53□□□□□ -0.88
USP49-204ENST00000423567 MCHR2Q969V1 340 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 C7orf34Q96L11 122 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 RBP7Q96R05 134 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 ZNF347Q96SE7 839 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 TRAF4Q9BUZ4 470 aaPredicted RBP9.53□□□□□ -0.88
USP49-204ENST00000423567 ALG12Q9BV10 488 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 GRIP2Q9C0E4 1043 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 DENND2DQ9H6A0 471 aaPredicted RBP9.53□□□□□ -0.88
USP49-204ENST00000423567 CBLN4Q9NTU7 201 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 ZNF701Q9NV72 531 aaPredicted RBP9.53□□□□□ -0.88
USP49-204ENST00000423567 ACTR3BQ9P1U1 418 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 TMCC3Q9ULS5 477 aa9.53□□□□□ -0.88
USP49-204ENST00000423567 PRPF19Q9UMS4 504 aaKnown RBP9.53□□□□□ -0.88
USP49-204ENST00000423567 XKRYO14609 159 aa9.52□□□□□ -0.89
USP49-204ENST00000423567 MGRN1O60291 552 aa9.52□□□□□ -0.89
USP49-204ENST00000423567 TRMUO75648 421 aaKnown RBP9.52□□□□□ -0.89
USP49-204ENST00000423567 DIRAS1O95057 198 aa9.52□□□□□ -0.89
USP49-204ENST00000423567 GADD45GO95257 159 aa9.52□□□□□ -0.89
USP49-204ENST00000423567 IGLV1-44P01699 117 aa9.52□□□□□ -0.89
USP49-204ENST00000423567 HLA-HP01893 362 aa9.52□□□□□ -0.89
USP49-204ENST00000423567 FUT4P22083 530 aa9.52□□□□□ -0.89
USP49-204ENST00000423567 APOBEC3AP31941 199 aaPredicted RBP9.52□□□□□ -0.89
USP49-204ENST00000423567 ACVR1BP36896 505 aa9.52□□□□□ -0.89
USP49-204ENST00000423567 IFNGR2P38484 337 aa9.52□□□□□ -0.89
USP49-204ENST00000423567 CDKN1AP38936 164 aa9.52□□□□□ -0.89
USP49-204ENST00000423567 GUCA1AP43080 201 aaPredicted RBP9.52□□□□□ -0.89
USP49-204ENST00000423567 GIPRP48546 466 aa9.52□□□□□ -0.89
USP49-204ENST00000423567 PTDSS1P48651 473 aaKnown RBP9.52□□□□□ -0.89
USP49-204ENST00000423567 RPL27P61353 136 aaKnown RBP9.52□□□□□ -0.89
USP49-204ENST00000423567 MYBPC1Q00872 1141 aa9.52□□□□□ -0.89
USP49-204ENST00000423567 PIGFQ07326 219 aa9.52□□□□□ -0.89
USP49-204ENST00000423567 ETFDHQ16134 617 aa9.52□□□□□ -0.89
USP49-204ENST00000423567 SLC36A2Q495M3 483 aa9.52□□□□□ -0.89
USP49-204ENST00000423567 NRN1LQ496H8 165 aa9.52□□□□□ -0.89
USP49-204ENST00000423567 ZBED5Q49AG3 693 aa9.52□□□□□ -0.89
USP49-204ENST00000423567 ARMC4Q5T2S8 1044 aa9.52□□□□□ -0.89
USP49-204ENST00000423567 TMEM53Q6P2H8 277 aa9.52□□□□□ -0.89
USP49-204ENST00000423567 LRFN4Q6PJG9 635 aa9.52□□□□□ -0.89
USP49-204ENST00000423567 CYP2R1Q6VVX0 501 aa9.52□□□□□ -0.89
USP49-204ENST00000423567 B3GLCTQ6Y288 498 aa9.52□□□□□ -0.89
USP49-204ENST00000423567 RINLQ6ZS11 566 aa9.52□□□□□ -0.89
USP49-204ENST00000423567 TRPM8Q7Z2W7 1104 aa9.52□□□□□ -0.89
USP49-204ENST00000423567 TSEN54Q7Z6J9 526 aaKnown RBP9.52□□□□□ -0.89
USP49-204ENST00000423567 MEX3DQ86XN8 651 aaKnown RBP9.52□□□□□ -0.89
USP49-204ENST00000423567 WDFY1Q8IWB7 410 aa9.52□□□□□ -0.89
USP49-204ENST00000423567 SLC22A24Q8N4F4 322 aa9.52□□□□□ -0.89
USP49-204ENST00000423567 OR4K5Q8NGD3 323 aa9.52□□□□□ -0.89
USP49-204ENST00000423567 FAM46AQ96IP4 442 aaKnown RBP9.52□□□□□ -0.89
USP49-204ENST00000423567 LRGUKQ96M69 825 aa9.52□□□□□ -0.89
USP49-204ENST00000423567 Q96MF0 132 aa9.52□□□□□ -0.89
USP49-204ENST00000423567 TNFRSF13CQ96RJ3 184 aa9.52□□□□□ -0.89
USP49-204ENST00000423567 MRPL13Q9BYD1 178 aaKnown RBP9.52□□□□□ -0.89
USP49-204ENST00000423567 C1orf21Q9H246 121 aa9.52□□□□□ -0.89
USP49-204ENST00000423567 KCNN2Q9H2S1 579 aa9.52□□□□□ -0.89
USP49-204ENST00000423567 RNF121Q9H920 327 aa9.52□□□□□ -0.89
USP49-204ENST00000423567 SMURF2Q9HAU4 748 aa9.52□□□□□ -0.89
USP49-204ENST00000423567 BARX1Q9HBU1 254 aaPredicted RBP9.52□□□□□ -0.89
USP49-204ENST00000423567 TMEM38BQ9NVV0 291 aa9.52□□□□□ -0.89
USP49-204ENST00000423567 GRHPRQ9UBQ7 328 aa9.52□□□□□ -0.89
USP49-204ENST00000423567 ZNF346Q9UL40 294 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms