RNA–Protein interactions for RNA: ENST00000402583.5

CBX1-203, Transcript of chromobox 1, humanhuman

TSL 4

Gene CBX1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-203ENST00000402583 SLC22A11Q9NSA0 550 aa8.4□□□□□ -1.06
CBX1-203ENST00000402583 STMN3Q9NZ72 180 aa8.4□□□□□ -1.06
CBX1-203ENST00000402583 FRRS1LQ9P0K9 344 aa8.4□□□□□ -1.06
CBX1-203ENST00000402583 PPP4R1LQ9P1A2 415 aa8.4□□□□□ -1.06
CBX1-203ENST00000402583 NXT1Q9UKK6 140 aaKnown RBP8.4□□□□□ -1.06
CBX1-203ENST00000402583 ATXN7L1Q9ULK2 861 aaPredicted RBP8.4□□□□□ -1.06
CBX1-203ENST00000402583 CLEC4AQ9UMR7 237 aa8.4□□□□□ -1.06
CBX1-203ENST00000402583 NPIPA1Q9UND3 350 aa8.4□□□□□ -1.06
CBX1-203ENST00000402583 MRPS7Q9Y2R9 242 aaKnown RBP8.4□□□□□ -1.06
CBX1-203ENST00000402583 KLHDC2Q9Y2U9 406 aa8.4□□□□□ -1.06
CBX1-203ENST00000402583 PCDHGA9Q9Y5G4 932 aaKnown RBP8.4□□□□□ -1.06
CBX1-203ENST00000402583 NUP210LQ5VU65 1888 aa8.4□□□□□ -1.07
CBX1-203ENST00000402583 ARHGEF17Q96PE2 2063 aaPredicted RBP8.39□□□□□ -1.07
CBX1-203ENST00000402583 COL5A1P20908 1838 aaPredicted RBP8.39□□□□□ -1.07
CBX1-203ENST00000402583 IGHV3-20A0A0C4DH32 117 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 IGHV5-10-1A0A0J9YXX1 117 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 SLC22A23A1A5C7 686 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 TRABD2BA6NFA1 517 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 OR4C45A6NMZ5 311 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 PSMD9O00233 223 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 DCTN6O00399 190 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 ZNF593O00488 134 aaPredicted RBP8.39□□□□□ -1.07
CBX1-203ENST00000402583 PIN1P1O15428 100 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 SIGLEC6O43699 453 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 SLC16A7O60669 478 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 PLGP00747 810 aaPredicted RBP8.39□□□□□ -1.07
CBX1-203ENST00000402583 SPARCP09486 303 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 ZNF823P16415 610 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 FKBP2P26885 142 aaKnown RBP8.39□□□□□ -1.07
CBX1-203ENST00000402583 MNDAP41218 407 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 DUSP3P51452 185 aaPredicted RBP8.39□□□□□ -1.07
CBX1-203ENST00000402583 ZNF41P51814 821 aaPredicted RBP8.39□□□□□ -1.07
CBX1-203ENST00000402583 RIDAP52758 137 aaKnown RBP8.39□□□□□ -1.07
CBX1-203ENST00000402583 NKX2-5P52952 324 aaPredicted RBP8.39□□□□□ -1.07
CBX1-203ENST00000402583 ART1P52961 327 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 RAG2P55895 527 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 FBXW4P57775 412 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 ROM1Q03395 351 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 GLO1Q04760 184 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 PUDPQ08623 228 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 MAB21L1Q13394 359 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 SLC17A1Q14916 467 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 CDK10Q15131 360 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 PLA1AQ53H76 456 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 OXLD1Q5BKU9 147 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 HES5Q5TA89 166 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 C1QL3Q5VWW1 255 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 STAC2Q6ZMT1 411 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 H1FNTQ75WM6 255 aaPredicted RBP8.39□□□□□ -1.07
CBX1-203ENST00000402583 LINGO2Q7L985 606 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 HDDC2Q7Z4H3 204 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 KRT77Q7Z794 578 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 LIX1LQ8IVB5 337 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 ZNF679Q8IYX0 411 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 APCDD1LQ8NCL9 501 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 TSEN15Q8WW01 171 aaKnown RBP8.39□□□□□ -1.07
CBX1-203ENST00000402583 RGP1Q92546 391 aaPredicted RBP8.39□□□□□ -1.07
CBX1-203ENST00000402583 EDAQ92838 391 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 ZNF524Q96C55 264 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 NXPE2Q96DL1 559 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 C4orf45Q96LM5 186 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 CCDC74BQ96LY2 380 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 DMRTB1Q96MA1 342 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 ZNF587Q96SQ5 575 aaPredicted RBP8.39□□□□□ -1.07
CBX1-203ENST00000402583 SMAD5Q99717 465 aaKnown RBP8.39□□□□□ -1.07
CBX1-203ENST00000402583 CRB3Q9BUF7 120 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 POTEKPQ9BYX7 375 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 SLC25A18Q9H1K4 315 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 TP63Q9H3D4 680 aaPredicted RBP8.39□□□□□ -1.07
CBX1-203ENST00000402583 ELOVL3Q9HB03 270 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 PLEKHA1Q9HB21 404 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 ALKBH4Q9NXW9 302 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 KLRF1Q9NZS2 232 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 EMC3Q9P0I2 261 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 KLHL9Q9P2J3 617 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 GPN3Q9UHW5 284 aaPredicted RBP8.39□□□□□ -1.07
CBX1-203ENST00000402583 PILRBQ9UKJ0 227 aa8.39□□□□□ -1.07
CBX1-203ENST00000402583 TRBV5-7A0A0A0MS05 114 aa8.38□□□□□ -1.07
CBX1-203ENST00000402583 IGLV1-36A0A0B4J1U3 117 aa8.38□□□□□ -1.07
CBX1-203ENST00000402583 A0A0B4J293 547 aa8.38□□□□□ -1.07
CBX1-203ENST00000402583 A0A1W2PQM1 296 aa8.38□□□□□ -1.07
CBX1-203ENST00000402583 TTLL8A6PVC2 850 aa8.38□□□□□ -1.07
CBX1-203ENST00000402583 C4orf47A7E2U8 309 aa8.38□□□□□ -1.07
CBX1-203ENST00000402583 A8MV72 311 aaPredicted RBP8.38□□□□□ -1.07
CBX1-203ENST00000402583 PRR32B1ATL7 298 aa8.38□□□□□ -1.07
CBX1-203ENST00000402583 FTCDNL1E5RQL4 147 aa8.38□□□□□ -1.07
CBX1-203ENST00000402583 GABARAPH6UMI1 98 aa8.38□□□□□ -1.07
CBX1-203ENST00000402583 SOX1O00570 391 aaPredicted RBP8.38□□□□□ -1.07
CBX1-203ENST00000402583 LANCL1O43813 399 aa8.38□□□□□ -1.07
CBX1-203ENST00000402583 KHDRBS3O75525 346 aaKnown RBP8.38□□□□□ -1.07
CBX1-203ENST00000402583 KRT33AO76009 404 aa8.38□□□□□ -1.07
CBX1-203ENST00000402583 C1QBP02746 253 aa8.38□□□□□ -1.07
CBX1-203ENST00000402583 CD2P06729 351 aa8.38□□□□□ -1.07
CBX1-203ENST00000402583 CD3GP09693 182 aa8.38□□□□□ -1.07
CBX1-203ENST00000402583 TFPIP10646 304 aa8.38□□□□□ -1.07
CBX1-203ENST00000402583 DPP4P27487 766 aa8.38□□□□□ -1.07
CBX1-203ENST00000402583 SOX2P48431 317 aa8.38□□□□□ -1.07
CBX1-203ENST00000402583 ADAM8P78325 824 aa8.38□□□□□ -1.07
CBX1-203ENST00000402583 CD83Q01151 205 aa8.38□□□□□ -1.07
CBX1-203ENST00000402583 SNTB2Q13425 540 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms