RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 ACTA1P68133 377 aa12.11□□□□□ -0.47
MCF2L-209ENST00000397036 CXADRP78310 365 aa12.11□□□□□ -0.47
MCF2L-209ENST00000397036 MELKQ14680 651 aa12.11□□□□□ -0.47
MCF2L-209ENST00000397036 LINC00303Q3SY05 128 aa12.11□□□□□ -0.47
MCF2L-209ENST00000397036 NADK2Q4G0N4 442 aa12.11□□□□□ -0.47
MCF2L-209ENST00000397036 KRTCAP3Q53RY4 240 aa12.11□□□□□ -0.47
MCF2L-209ENST00000397036 CHMP1BQ7LBR1 199 aa12.11□□□□□ -0.47
MCF2L-209ENST00000397036 ZNF367Q7RTV3 350 aa12.11□□□□□ -0.47
MCF2L-209ENST00000397036 OR4F15Q8NGB8 312 aa12.11□□□□□ -0.47
MCF2L-209ENST00000397036 OR51G2Q8NGK0 314 aa12.11□□□□□ -0.47
MCF2L-209ENST00000397036 OR13F1Q8NGS4 319 aa12.11□□□□□ -0.47
MCF2L-209ENST00000397036 RNF128Q8TEB7 428 aa12.11□□□□□ -0.47
MCF2L-209ENST00000397036 ZNRF4Q8WWF5 429 aa12.11□□□□□ -0.47
MCF2L-209ENST00000397036 TMEM45BQ96B21 275 aa12.11□□□□□ -0.47
MCF2L-209ENST00000397036 SRA1Q9HD15 236 aaKnown RBP12.11□□□□□ -0.47
MCF2L-209ENST00000397036 ISYNA1Q9NPH2 558 aa12.11□□□□□ -0.47
MCF2L-209ENST00000397036 FLVCR1Q9Y5Y0 555 aa12.11□□□□□ -0.47
MCF2L-209ENST00000397036 CHD8Q9HCK8 2581 aa12.1□□□□□ -0.47
MCF2L-209ENST00000397036 LOC400499M0QZD8 3231 aa12.1□□□□□ -0.47
MCF2L-209ENST00000397036 ZNF724A8MTY0 619 aa12.1□□□□□ -0.47
MCF2L-209ENST00000397036 SLC16A7O60669 478 aa12.1□□□□□ -0.47
MCF2L-209ENST00000397036 KHDRBS3O75525 346 aaKnown RBP12.1□□□□□ -0.47
MCF2L-209ENST00000397036 HRGP04196 525 aa12.1□□□□□ -0.47
MCF2L-209ENST00000397036 GYPBP06028 91 aa12.1□□□□□ -0.47
MCF2L-209ENST00000397036 LIMS3P0CW19 117 aa12.1□□□□□ -0.47
MCF2L-209ENST00000397036 LIMS4P0CW20 117 aa12.1□□□□□ -0.47
MCF2L-209ENST00000397036 PTGS2P35354 604 aa12.1□□□□□ -0.47
MCF2L-209ENST00000397036 MAP2K4P45985 399 aa12.1□□□□□ -0.47
MCF2L-209ENST00000397036 HSF2Q03933 536 aa12.1□□□□□ -0.47
MCF2L-209ENST00000397036 RASGEF1BQ0VAM2 473 aa12.1□□□□□ -0.47
MCF2L-209ENST00000397036 RNPS1Q15287 305 aaKnown RBP12.1□□□□□ -0.47
MCF2L-209ENST00000397036 NEDD8Q15843 81 aa12.1□□□□□ -0.47
MCF2L-209ENST00000397036 ZNF324BQ6AW86 544 aaPredicted RBP12.1□□□□□ -0.47
MCF2L-209ENST00000397036 SLC16A9Q7RTY1 509 aa12.1□□□□□ -0.47
MCF2L-209ENST00000397036 GPR141Q7Z602 305 aa12.1□□□□□ -0.47
MCF2L-209ENST00000397036 TIGD4Q8IY51 512 aa12.1□□□□□ -0.47
MCF2L-209ENST00000397036 ZNF485Q8NCK3 441 aa12.1□□□□□ -0.47
MCF2L-209ENST00000397036 NOXO1Q8NFA2 376 aa12.1□□□□□ -0.47
MCF2L-209ENST00000397036 OR52N1Q8NH53 320 aa12.1□□□□□ -0.47
MCF2L-209ENST00000397036 TMEM54Q969K7 222 aa12.1□□□□□ -0.47
MCF2L-209ENST00000397036 ZMYND19Q96E35 227 aaPredicted RBP12.1□□□□□ -0.47
MCF2L-209ENST00000397036 ZNF845Q96IR2 970 aaPredicted RBP12.1□□□□□ -0.47
MCF2L-209ENST00000397036 COG8Q96MW5 612 aa12.1□□□□□ -0.47
MCF2L-209ENST00000397036 TSSK2Q96PF2 358 aa12.1□□□□□ -0.47
MCF2L-209ENST00000397036 CNN2Q99439 309 aaKnown RBP12.1□□□□□ -0.47
MCF2L-209ENST00000397036 EMC6Q9BV81 110 aa12.1□□□□□ -0.47
MCF2L-209ENST00000397036 MND1Q9BWT6 205 aa12.1□□□□□ -0.47
MCF2L-209ENST00000397036 YIPF3Q9GZM5 350 aa12.1□□□□□ -0.47
MCF2L-209ENST00000397036 BCO1Q9HAY6 547 aa12.1□□□□□ -0.47
MCF2L-209ENST00000397036 ERVK13-1Q9NX77 482 aa12.1□□□□□ -0.47
MCF2L-209ENST00000397036 ING1Q9UK53 422 aaPredicted RBP12.1□□□□□ -0.47
MCF2L-209ENST00000397036 LSM2Q9Y333 95 aaKnown RBP12.1□□□□□ -0.47
MCF2L-209ENST00000397036 CAB39Q9Y376 341 aaPredicted RBP12.1□□□□□ -0.47
MCF2L-209ENST00000397036 MGAQ8IWI9 3026 aa12.09□□□□□ -0.47
MCF2L-209ENST00000397036 IGHV3-15A0A0B4J1V0 119 aa12.09□□□□□ -0.47
MCF2L-209ENST00000397036 MED19A0JLT2 244 aaPredicted RBP12.09□□□□□ -0.47
MCF2L-209ENST00000397036 AHRRA9YTQ3 701 aa12.09□□□□□ -0.47
MCF2L-209ENST00000397036 H7C1C5 153 aa12.09□□□□□ -0.47
MCF2L-209ENST00000397036 PTHP01270 115 aa12.09□□□□□ -0.47
MCF2L-209ENST00000397036 CTLA4P16410 223 aa12.09□□□□□ -0.47
MCF2L-209ENST00000397036 PYCR1P32322 319 aa12.09□□□□□ -0.47
MCF2L-209ENST00000397036 CLDN17P56750 224 aa12.09□□□□□ -0.47
MCF2L-209ENST00000397036 LCN6P62502 163 aa12.09□□□□□ -0.47
MCF2L-209ENST00000397036 GLO1Q04760 184 aa12.09□□□□□ -0.47
MCF2L-209ENST00000397036 SRYQ05066 204 aa12.09□□□□□ -0.47
MCF2L-209ENST00000397036 ACSM1Q08AH1 577 aa12.09□□□□□ -0.47
MCF2L-209ENST00000397036 GALEQ14376 348 aa12.09□□□□□ -0.47
MCF2L-209ENST00000397036 RAB39AQ14964 217 aa12.09□□□□□ -0.47
MCF2L-209ENST00000397036 SPHARQ15513 63 aa12.09□□□□□ -0.47
MCF2L-209ENST00000397036 TEX30Q5JUR7 227 aa12.09□□□□□ -0.47
MCF2L-209ENST00000397036 SLC25A47Q6Q0C1 308 aa12.09□□□□□ -0.47
MCF2L-209ENST00000397036 B3GLCTQ6Y288 498 aa12.09□□□□□ -0.47
MCF2L-209ENST00000397036 SATL1Q86VE3 508 aa12.09□□□□□ -0.47
MCF2L-209ENST00000397036 TMEM123Q8N131 208 aa12.09□□□□□ -0.47
MCF2L-209ENST00000397036 ROBO4Q8WZ75 1007 aa12.09□□□□□ -0.47
MCF2L-209ENST00000397036 ZNF385AQ96PM9 386 aaKnown RBP12.09□□□□□ -0.47
MCF2L-209ENST00000397036 OR2M2Q96R28 347 aa12.09□□□□□ -0.47
MCF2L-209ENST00000397036 PRORYQ9H606 182 aa12.09□□□□□ -0.47
MCF2L-209ENST00000397036 GLRX2Q9NS18 164 aa12.09□□□□□ -0.47
MCF2L-209ENST00000397036 PARPBPQ9NWS1 579 aa12.09□□□□□ -0.47
MCF2L-209ENST00000397036 GLTPQ9NZD2 209 aa12.09□□□□□ -0.47
MCF2L-209ENST00000397036 EMC3Q9P0I2 261 aa12.09□□□□□ -0.47
MCF2L-209ENST00000397036 CLEC2DQ9UHP7 191 aa12.09□□□□□ -0.47
MCF2L-209ENST00000397036 FOXD3Q9UJU5 478 aaPredicted RBP12.09□□□□□ -0.47
MCF2L-209ENST00000397036 OR6C65A6NJZ3 312 aa12.08□□□□□ -0.48
MCF2L-209ENST00000397036 C12orf71A8MTZ7 269 aa12.08□□□□□ -0.48
MCF2L-209ENST00000397036 INMTO95050 263 aa12.08□□□□□ -0.48
MCF2L-209ENST00000397036 FCGR2AP12318 317 aa12.08□□□□□ -0.48
MCF2L-209ENST00000397036 ETV1P50549 477 aa12.08□□□□□ -0.48
MCF2L-209ENST00000397036 GP2P55259 537 aaKnown RBP12.08□□□□□ -0.48
MCF2L-209ENST00000397036 CLRN1P58418 232 aa12.08□□□□□ -0.48
MCF2L-209ENST00000397036 SF3B4Q15427 424 aaKnown RBP eCLIP12.08□□□□□ -0.48
MCF2L-209ENST00000397036 PCK2Q16822 640 aa12.08□□□□□ -0.48
MCF2L-209ENST00000397036 C10orf128Q5T292 105 aa12.08□□□□□ -0.48
MCF2L-209ENST00000397036 RIPPLY2Q5TAB7 128 aa12.08□□□□□ -0.48
MCF2L-209ENST00000397036 WDFY1Q8IWB7 410 aa12.08□□□□□ -0.48
MCF2L-209ENST00000397036 C20orf196Q8IYI0 205 aa12.08□□□□□ -0.48
MCF2L-209ENST00000397036 SYT14Q8NB59 555 aa12.08□□□□□ -0.48
MCF2L-209ENST00000397036 OR51L1Q8NGJ5 315 aa12.08□□□□□ -0.48
MCF2L-209ENST00000397036 OR6K6Q8NGW6 343 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms