RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 LRFN1Q9P244 771 aa17.05■□□□□ 0.32
CLDND1-203ENST00000394181 SULT2B1O00204 365 aa17.04■□□□□ 0.32
CLDND1-203ENST00000394181 ZNF593O00488 134 aaPredicted RBP17.04■□□□□ 0.32
CLDND1-203ENST00000394181 FZD7O75084 574 aa17.04■□□□□ 0.32
CLDND1-203ENST00000394181 RPP14O95059 124 aaKnown RBP17.04■□□□□ 0.32
CLDND1-203ENST00000394181 ALOX5APP20292 161 aa17.04■□□□□ 0.32
CLDND1-203ENST00000394181 CDK5R1Q15078 307 aa17.04■□□□□ 0.32
CLDND1-203ENST00000394181 TMPPEQ6ZT21 453 aa17.04■□□□□ 0.32
CLDND1-203ENST00000394181 THEM6Q8WUY1 208 aa17.04■□□□□ 0.32
CLDND1-203ENST00000394181 S100ZQ8WXG8 99 aa17.04■□□□□ 0.32
CLDND1-203ENST00000394181 LAMP5Q9UJQ1 280 aa17.04■□□□□ 0.32
CLDND1-203ENST00000394181 A0A1B0GTH9 108 aa17.04■□□□□ 0.32
CLDND1-203ENST00000394181 A0A1W2PPK0 400 aa17.04■□□□□ 0.32
CLDND1-203ENST00000394181 CDRT15L2A8MXV6 281 aa17.04■□□□□ 0.32
CLDND1-203ENST00000394181 EDNRAP25101 427 aa17.04■□□□□ 0.32
CLDND1-203ENST00000394181 DAP3P51398 398 aaKnown RBP17.04■□□□□ 0.32
CLDND1-203ENST00000394181 B3GALT5-AS1P59052 145 aa17.04■□□□□ 0.32
CLDND1-203ENST00000394181 TAS2R43P59537 309 aa17.04■□□□□ 0.32
CLDND1-203ENST00000394181 LINC00696Q6ZRV3 163 aa17.04■□□□□ 0.32
CLDND1-203ENST00000394181 NR2C2APQ86WQ0 139 aa17.04■□□□□ 0.32
CLDND1-203ENST00000394181 SLC25A43Q8WUT9 341 aaPredicted RBP17.04■□□□□ 0.32
CLDND1-203ENST00000394181 MIB2Q96AX9 1013 aa17.04■□□□□ 0.32
CLDND1-203ENST00000394181 SNX18Q96RF0 628 aa17.04■□□□□ 0.32
CLDND1-203ENST00000394181 MED18Q9BUE0 208 aa17.04■□□□□ 0.32
CLDND1-203ENST00000394181 SMURF1Q9HCE7 757 aa17.04■□□□□ 0.32
CLDND1-203ENST00000394181 MED13Q9UHV7 2174 aa17.03■□□□□ 0.32
CLDND1-203ENST00000394181 IGHV3-15A0A0B4J1V0 119 aa17.03■□□□□ 0.32
CLDND1-203ENST00000394181 TRBV2A0A0J9YWF9 115 aa17.03■□□□□ 0.32
CLDND1-203ENST00000394181 A0A1W2PNV4 684 aa17.03■□□□□ 0.32
CLDND1-203ENST00000394181 CASKO14936 926 aa17.03■□□□□ 0.32
CLDND1-203ENST00000394181 NEURL1O76050 574 aa17.03■□□□□ 0.32
CLDND1-203ENST00000394181 GDI2P50395 445 aaKnown RBP17.03■□□□□ 0.32
CLDND1-203ENST00000394181 CEACAM19Q7Z692 300 aa17.03■□□□□ 0.32
CLDND1-203ENST00000394181 VASH2Q86V25 355 aa17.03■□□□□ 0.32
CLDND1-203ENST00000394181 TMPRSS12Q86WS5 348 aa17.03■□□□□ 0.32
CLDND1-203ENST00000394181 WDR12Q9GZL7 423 aaKnown RBP17.03■□□□□ 0.32
CLDND1-203ENST00000394181 SIAEQ9HAT2 523 aa17.03■□□□□ 0.32
CLDND1-203ENST00000394181 FANCFQ9NPI8 374 aa17.03■□□□□ 0.32
CLDND1-203ENST00000394181 HDGFL3Q9Y3E1 203 aa17.03■□□□□ 0.32
CLDND1-203ENST00000394181 LAMA5O15230 3695 aa17.03■□□□□ 0.32
CLDND1-203ENST00000394181 NCKAP5O14513 1909 aa17.03■□□□□ 0.32
CLDND1-203ENST00000394181 A0A075B6Q4 140 aa17.02■□□□□ 0.32
CLDND1-203ENST00000394181 UPK3AO75631 287 aa17.02■□□□□ 0.32
CLDND1-203ENST00000394181 FREM3P0C091 2139 aa17.02■□□□□ 0.32
CLDND1-203ENST00000394181 CALRP27797 417 aaKnown RBP17.02■□□□□ 0.32
CLDND1-203ENST00000394181 RFC3P40938 356 aa17.02■□□□□ 0.32
CLDND1-203ENST00000394181 MAGEB1P43366 347 aa17.02■□□□□ 0.32
CLDND1-203ENST00000394181 RPS11P62280 158 aaKnown RBP eCLIP17.02■□□□□ 0.32
CLDND1-203ENST00000394181 HSF2Q03933 536 aa17.02■□□□□ 0.32
CLDND1-203ENST00000394181 ABHD17BQ5VST6 288 aa17.02■□□□□ 0.32
CLDND1-203ENST00000394181 TMEM225Q6GV28 225 aa17.02■□□□□ 0.32
CLDND1-203ENST00000394181 TUBA3EQ6PEY2 450 aa17.02■□□□□ 0.32
CLDND1-203ENST00000394181 CROCCP3Q8IVE0 287 aa17.02■□□□□ 0.32
CLDND1-203ENST00000394181 SMIM19Q96E16 107 aa17.02■□□□□ 0.32
CLDND1-203ENST00000394181 KLHL15Q96M94 604 aa17.02■□□□□ 0.32
CLDND1-203ENST00000394181 SMAD5Q99717 465 aaKnown RBP17.02■□□□□ 0.32
CLDND1-203ENST00000394181 COQ7Q99807 217 aa17.02■□□□□ 0.32
CLDND1-203ENST00000394181 ASCL3Q9NQ33 180 aa17.02■□□□□ 0.32
CLDND1-203ENST00000394181 KLHL13Q9P2N7 655 aa17.02■□□□□ 0.32
CLDND1-203ENST00000394181 A0A0J9YW62 118 aa17.02■□□□□ 0.31
CLDND1-203ENST00000394181 A6NIZ1 184 aa17.02■□□□□ 0.31
CLDND1-203ENST00000394181 SC5DO75845 299 aa17.02■□□□□ 0.31
CLDND1-203ENST00000394181 ABHD16AO95870 558 aa17.02■□□□□ 0.31
CLDND1-203ENST00000394181 WNT11O96014 354 aa17.02■□□□□ 0.31
CLDND1-203ENST00000394181 RBMS1P29558 406 aaKnown RBP17.02■□□□□ 0.31
CLDND1-203ENST00000394181 S100A5P33763 92 aa17.02■□□□□ 0.31
CLDND1-203ENST00000394181 RAP1BP61224 184 aa17.02■□□□□ 0.31
CLDND1-203ENST00000394181 RAP1AP62834 184 aa17.02■□□□□ 0.31
CLDND1-203ENST00000394181 FOXO1Q12778 655 aa17.02■□□□□ 0.31
CLDND1-203ENST00000394181 CAMK2DQ13557 499 aa17.02■□□□□ 0.31
CLDND1-203ENST00000394181 ACSM3Q53FZ2 586 aa17.02■□□□□ 0.31
CLDND1-203ENST00000394181 LIPNQ5VXI9 398 aa17.02■□□□□ 0.31
CLDND1-203ENST00000394181 JMJD6Q6NYC1 403 aaPredicted RBP17.02■□□□□ 0.31
CLDND1-203ENST00000394181 SPATC1Q76KD6 591 aa17.02■□□□□ 0.31
CLDND1-203ENST00000394181 LAX1Q8IWV1 398 aa17.02■□□□□ 0.31
CLDND1-203ENST00000394181 UEVLDQ8IX04 471 aa17.02■□□□□ 0.31
CLDND1-203ENST00000394181 OTOSQ8NHW6 89 aa17.02■□□□□ 0.31
CLDND1-203ENST00000394181 NSMAFQ92636 917 aa17.02■□□□□ 0.31
CLDND1-203ENST00000394181 UCN2Q96RP3 112 aa17.02■□□□□ 0.31
CLDND1-203ENST00000394181 SLCO1C1Q9NYB5 712 aa17.02■□□□□ 0.31
CLDND1-203ENST00000394181 PEX16Q9Y5Y5 336 aa17.02■□□□□ 0.31
CLDND1-203ENST00000394181 A6NL46 340 aa17.01■□□□□ 0.31
CLDND1-203ENST00000394181 RGS5O15539 181 aa17.01■□□□□ 0.31
CLDND1-203ENST00000394181 TRAF3IP2O43734 574 aaPredicted RBP17.01■□□□□ 0.31
CLDND1-203ENST00000394181 WDPCPO95876 746 aa17.01■□□□□ 0.31
CLDND1-203ENST00000394181 TNFSF8P32971 234 aa17.01■□□□□ 0.31
CLDND1-203ENST00000394181 CLDN20P56880 219 aa17.01■□□□□ 0.31
CLDND1-203ENST00000394181 CARD17Q5XLA6 110 aa17.01■□□□□ 0.31
CLDND1-203ENST00000394181 RPL22L1Q6P5R6 122 aaKnown RBP17.01■□□□□ 0.31
CLDND1-203ENST00000394181 PARP16Q8N5Y8 322 aa17.01■□□□□ 0.31
CLDND1-203ENST00000394181 YIPF7Q8N8F6 280 aa17.01■□□□□ 0.31
CLDND1-203ENST00000394181 B3GNT4Q9C0J1 378 aa17.01■□□□□ 0.31
CLDND1-203ENST00000394181 RNF32Q9H0A6 362 aa17.01■□□□□ 0.31
CLDND1-203ENST00000394181 IKZF2Q9UKS7 526 aa17.01■□□□□ 0.31
CLDND1-203ENST00000394181 TRAPPC4Q9Y296 219 aa17.01■□□□□ 0.31
CLDND1-203ENST00000394181 NPIPB13A6NJU9 1138 aa17.01■□□□□ 0.31
CLDND1-203ENST00000394181 AQP7P3A6NL99 342 aa17.01■□□□□ 0.31
CLDND1-203ENST00000394181 NPIPB4C9JG80 1138 aa17.01■□□□□ 0.31
CLDND1-203ENST00000394181 TNFSF11O14788 317 aa17.01■□□□□ 0.31
CLDND1-203ENST00000394181 TRAPPC6AO75865 159 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms