RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 NRN1LQ496H8 165 aa11.78□□□□□ -0.52
TNFRSF1A-202ENST00000366159 CYBRD1Q53TN4 286 aa11.78□□□□□ -0.52
TNFRSF1A-202ENST00000366159 HIST3H2AQ7L7L0 130 aa11.78□□□□□ -0.52
TNFRSF1A-202ENST00000366159 SPATA21Q7Z572 469 aa11.78□□□□□ -0.52
TNFRSF1A-202ENST00000366159 NANOGNBQ7Z5D8 188 aa11.78□□□□□ -0.52
TNFRSF1A-202ENST00000366159 SLC15A3Q8IY34 581 aa11.78□□□□□ -0.52
TNFRSF1A-202ENST00000366159 MICU2Q8IYU8 434 aa11.78□□□□□ -0.52
TNFRSF1A-202ENST00000366159 OR2T12Q8NG77 320 aa11.78□□□□□ -0.52
TNFRSF1A-202ENST00000366159 RP9Q8TA86 221 aaKnown RBP11.78□□□□□ -0.52
TNFRSF1A-202ENST00000366159 ASB10Q8WXI3 467 aa11.78□□□□□ -0.52
TNFRSF1A-202ENST00000366159 HIST1H2ACQ93077 130 aa11.78□□□□□ -0.52
TNFRSF1A-202ENST00000366159 MCHR2Q969V1 340 aa11.78□□□□□ -0.52
TNFRSF1A-202ENST00000366159 PIMREGQ9BSJ6 248 aa11.78□□□□□ -0.52
TNFRSF1A-202ENST00000366159 MRPL37Q9BZE1 423 aaKnown RBP11.78□□□□□ -0.52
TNFRSF1A-202ENST00000366159 RAB1BQ9H0U4 201 aa11.78□□□□□ -0.52
TNFRSF1A-202ENST00000366159 ARMCX1Q9P291 453 aa11.78□□□□□ -0.52
TNFRSF1A-202ENST00000366159 GMPR2Q9P2T1 348 aaKnown RBP11.78□□□□□ -0.52
TNFRSF1A-202ENST00000366159 METRNQ9UJH8 293 aa11.78□□□□□ -0.52
TNFRSF1A-202ENST00000366159 FBXL3Q9UKT7 428 aa11.78□□□□□ -0.52
TNFRSF1A-202ENST00000366159 A4GNTQ9UNA3 340 aa11.78□□□□□ -0.52
TNFRSF1A-202ENST00000366159 CMAHPQ9Y471 501 aa11.78□□□□□ -0.52
TNFRSF1A-202ENST00000366159 CAPN7Q9Y6W3 813 aa11.78□□□□□ -0.52
TNFRSF1A-202ENST00000366159 IGHV4-61A0A0C4DH41 118 aa11.77□□□□□ -0.53
TNFRSF1A-202ENST00000366159 ELOVL7A1L3X0 281 aa11.77□□□□□ -0.53
TNFRSF1A-202ENST00000366159 F13BP05160 661 aa11.77□□□□□ -0.53
TNFRSF1A-202ENST00000366159 OR8G3PP0DMU2 310 aa11.77□□□□□ -0.53
TNFRSF1A-202ENST00000366159 UMPSP11172 480 aa11.77□□□□□ -0.53
TNFRSF1A-202ENST00000366159 AQP2P41181 271 aa11.77□□□□□ -0.53
TNFRSF1A-202ENST00000366159 FHL1Q13642 323 aa11.77□□□□□ -0.53
TNFRSF1A-202ENST00000366159 RAB39AQ14964 217 aa11.77□□□□□ -0.53
TNFRSF1A-202ENST00000366159 C10orf128Q5T292 105 aa11.77□□□□□ -0.53
TNFRSF1A-202ENST00000366159 ARMC4Q5T2S8 1044 aa11.77□□□□□ -0.53
TNFRSF1A-202ENST00000366159 CYB5R2Q6BCY4 276 aa11.77□□□□□ -0.53
TNFRSF1A-202ENST00000366159 DEF8Q6ZN54 512 aa11.77□□□□□ -0.53
TNFRSF1A-202ENST00000366159 ZNF786Q8N393 782 aa11.77□□□□□ -0.53
TNFRSF1A-202ENST00000366159 POU5F2Q8N7G0 328 aa11.77□□□□□ -0.53
TNFRSF1A-202ENST00000366159 NEU4Q8WWR8 484 aaPredicted RBP11.77□□□□□ -0.53
TNFRSF1A-202ENST00000366159 RCN3Q96D15 328 aa11.77□□□□□ -0.53
TNFRSF1A-202ENST00000366159 NMD3Q96D46 503 aaKnown RBP11.77□□□□□ -0.53
TNFRSF1A-202ENST00000366159 SGTBQ96EQ0 304 aa11.77□□□□□ -0.53
TNFRSF1A-202ENST00000366159 ZNF347Q96SE7 839 aa11.77□□□□□ -0.53
TNFRSF1A-202ENST00000366159 SH3GL3Q99963 347 aa11.77□□□□□ -0.53
TNFRSF1A-202ENST00000366159 MAN2C1Q9NTJ4 1040 aa11.77□□□□□ -0.53
TNFRSF1A-202ENST00000366159 HTR3EA5X5Y0 456 aa11.76□□□□□ -0.53
TNFRSF1A-202ENST00000366159 FFAR1O14842 300 aa11.76□□□□□ -0.53
TNFRSF1A-202ENST00000366159 TRMUO75648 421 aaKnown RBP11.76□□□□□ -0.53
TNFRSF1A-202ENST00000366159 RAB36O95755 333 aa11.76□□□□□ -0.53
TNFRSF1A-202ENST00000366159 IGHG1P01857 330 aa11.76□□□□□ -0.53
TNFRSF1A-202ENST00000366159 TACSTD2P09758 323 aa11.76□□□□□ -0.53
TNFRSF1A-202ENST00000366159 ACADSP16219 412 aa11.76□□□□□ -0.53
TNFRSF1A-202ENST00000366159 RIN1Q13671 783 aa11.76□□□□□ -0.53
TNFRSF1A-202ENST00000366159 LAPTM4AQ15012 233 aa11.76□□□□□ -0.53
TNFRSF1A-202ENST00000366159 CHRFAM7AQ494W8 412 aa11.76□□□□□ -0.53
TNFRSF1A-202ENST00000366159 LRRC23Q53EV4 343 aaPredicted RBP11.76□□□□□ -0.53
TNFRSF1A-202ENST00000366159 NOXO1Q8NFA2 376 aa11.76□□□□□ -0.53
TNFRSF1A-202ENST00000366159 OR4K5Q8NGD3 323 aa11.76□□□□□ -0.53
TNFRSF1A-202ENST00000366159 MOSPD2Q8NHP6 518 aa11.76□□□□□ -0.53
TNFRSF1A-202ENST00000366159 MSI2Q96DH6 328 aaKnown RBP11.76□□□□□ -0.53
TNFRSF1A-202ENST00000366159 PRRC1Q96M27 445 aa11.76□□□□□ -0.53
TNFRSF1A-202ENST00000366159 BPESC1Q9GZL8 116 aa11.76□□□□□ -0.53
TNFRSF1A-202ENST00000366159 INIPQ9NRY2 104 aa11.76□□□□□ -0.53
TNFRSF1A-202ENST00000366159 HIF3AQ9Y2N7 669 aa11.76□□□□□ -0.53
TNFRSF1A-202ENST00000366159 AP3M1Q9Y2T2 418 aa11.76□□□□□ -0.53
TNFRSF1A-202ENST00000366159 MED31Q9Y3C7 131 aa11.76□□□□□ -0.53
TNFRSF1A-202ENST00000366159 SPEF1Q9Y4P9 236 aa11.76□□□□□ -0.53
TNFRSF1A-202ENST00000366159 SNX13Q9Y5W8 968 aa11.76□□□□□ -0.53
TNFRSF1A-202ENST00000366159 RTTNQ86VV8 2226 aa11.76□□□□□ -0.53
TNFRSF1A-202ENST00000366159 MALRD1Q5VYJ5 2156 aa11.76□□□□□ -0.53
TNFRSF1A-202ENST00000366159 A0A1W2PRG6 482 aa11.75□□□□□ -0.53
TNFRSF1A-202ENST00000366159 SH3PXD2BA1X283 911 aa11.75□□□□□ -0.53
TNFRSF1A-202ENST00000366159 SYNGR3O43761 229 aa11.75□□□□□ -0.53
TNFRSF1A-202ENST00000366159 MGRN1O60291 552 aa11.75□□□□□ -0.53
TNFRSF1A-202ENST00000366159 PIP5K1CO60331 668 aa11.75□□□□□ -0.53
TNFRSF1A-202ENST00000366159 ENTPD5O75356 428 aa11.75□□□□□ -0.53
TNFRSF1A-202ENST00000366159 MMP7P09237 267 aaPredicted RBP11.75□□□□□ -0.53
TNFRSF1A-202ENST00000366159 COX4I1P13073 169 aa11.75□□□□□ -0.53
TNFRSF1A-202ENST00000366159 DAOP14920 347 aa11.75□□□□□ -0.53
TNFRSF1A-202ENST00000366159 ZNF16P17020 682 aaPredicted RBP11.75□□□□□ -0.53
TNFRSF1A-202ENST00000366159 ZNF23P17027 643 aa11.75□□□□□ -0.53
TNFRSF1A-202ENST00000366159 MDH1P40925 334 aaKnown RBP11.75□□□□□ -0.53
TNFRSF1A-202ENST00000366159 GZMKP49863 264 aa11.75□□□□□ -0.53
TNFRSF1A-202ENST00000366159 ST3GAL3Q11203 375 aa11.75□□□□□ -0.53
TNFRSF1A-202ENST00000366159 GGTLC2Q14390 218 aa11.75□□□□□ -0.53
TNFRSF1A-202ENST00000366159 CXXC5Q7LFL8 322 aaKnown RBP11.75□□□□□ -0.53
TNFRSF1A-202ENST00000366159 DPPA2Q7Z7J5 298 aa11.75□□□□□ -0.53
TNFRSF1A-202ENST00000366159 LRP11Q86VZ4 500 aa11.75□□□□□ -0.53
TNFRSF1A-202ENST00000366159 TREML1Q86YW5 311 aa11.75□□□□□ -0.53
TNFRSF1A-202ENST00000366159 PAQR4Q8N4S7 273 aaPredicted RBP11.75□□□□□ -0.53
TNFRSF1A-202ENST00000366159 LRRC75AQ8NAA5 344 aa11.75□□□□□ -0.53
TNFRSF1A-202ENST00000366159 ZNF540Q8NDQ6 660 aa11.75□□□□□ -0.53
TNFRSF1A-202ENST00000366159 KCNK17Q96T54 332 aa11.75□□□□□ -0.53
TNFRSF1A-202ENST00000366159 SOX7Q9BT81 388 aa11.75□□□□□ -0.53
TNFRSF1A-202ENST00000366159 TXNIPQ9H3M7 391 aa11.75□□□□□ -0.53
TNFRSF1A-202ENST00000366159 MED4Q9NPJ6 270 aa11.75□□□□□ -0.53
TNFRSF1A-202ENST00000366159 MYEF2Q9P2K5 600 aaKnown RBP11.75□□□□□ -0.53
TNFRSF1A-202ENST00000366159 SLC7A8Q9UHI5 535 aa11.75□□□□□ -0.53
TNFRSF1A-202ENST00000366159 CDC42EP3Q9UKI2 254 aa11.75□□□□□ -0.53
TNFRSF1A-202ENST00000366159 UGT2A1Q9Y4X1 527 aa11.75□□□□□ -0.53
TNFRSF1A-202ENST00000366159 IGKV1D-43A0A0B4J1Z2 117 aa11.74□□□□□ -0.53
TNFRSF1A-202ENST00000366159 NME4O00746 187 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms