RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 PSKH1P11801 424 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 ICAM2P13598 275 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 HLA-DOBP13765 273 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 LIFP15018 202 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 CTLA4P16410 223 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 PTBP1P26599 531 aaKnown RBP eCLIP6.21□□□□□ -1.42
TRIM55-203ENST00000350034 GTF2E2P29084 291 aaKnown RBP6.21□□□□□ -1.42
TRIM55-203ENST00000350034 THBS2P35442 1172 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 GDI2P50395 445 aaKnown RBP6.21□□□□□ -1.42
TRIM55-203ENST00000350034 SSR4P51571 173 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 CAV3P56539 151 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 NANOS3P60323 173 aaKnown RBP6.21□□□□□ -1.42
TRIM55-203ENST00000350034 PPP3R1P63098 170 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 ROM1Q03395 351 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 SELENBP1Q13228 472 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 EIF3IQ13347 325 aaKnown RBP6.21□□□□□ -1.42
TRIM55-203ENST00000350034 RIN1Q13671 783 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 ATP1A4Q13733 1029 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 OR7A5Q15622 319 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 PCK2Q16822 640 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 TRIM16LQ309B1 348 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 ZMAT1Q5H9K5 638 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 CEP78Q5JTW2 689 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 FAM27D1Q5T7N8 215 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 DDI2Q5TDH0 399 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 HBMQ6B0K9 141 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 METAP1DQ6UB28 335 aaPredicted RBP6.21□□□□□ -1.42
TRIM55-203ENST00000350034 CEACAM19Q7Z692 300 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 GTPBP8Q8N3Z3 284 aaPredicted RBP6.21□□□□□ -1.42
TRIM55-203ENST00000350034 FAM83FQ8NEG4 500 aaPredicted RBP6.21□□□□□ -1.42
TRIM55-203ENST00000350034 NLGN4YQ8NFZ3 816 aaPredicted RBP6.21□□□□□ -1.42
TRIM55-203ENST00000350034 OR4K17Q8NGC6 315 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 OTOSQ8NHW6 89 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 SLC25A43Q8WUT9 341 aaPredicted RBP6.21□□□□□ -1.42
TRIM55-203ENST00000350034 ACOT12Q8WYK0 555 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 ZBTB8AQ96BR9 441 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 PPP1R14BQ96C90 147 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 NXPE2Q96DL1 559 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 MS4A3Q96HJ5 214 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 TMEM41AQ96HV5 264 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 MAP6Q96JE9 813 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 SGCZQ96LD1 299 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 ADAD1Q96M93 576 aaKnown RBP6.21□□□□□ -1.42
TRIM55-203ENST00000350034 UBL7Q96S82 380 aaPredicted RBP6.21□□□□□ -1.42
TRIM55-203ENST00000350034 KCNK17Q96T54 332 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 TTYH2Q9BSA4 534 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 EDEM2Q9BV94 578 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 B3GNT4Q9C0J1 378 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 PPP1R3EQ9H7J1 279 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 SP140LQ9H930 580 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 ZNF160Q9HCG1 818 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 ABCB10Q9NRK6 738 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 SERINC1Q9NRX5 453 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 MRPL22Q9NWU5 206 aaKnown RBP6.21□□□□□ -1.42
TRIM55-203ENST00000350034 PISDQ9UG56 409 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 DAPK2Q9UIK4 370 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 GNG8Q9UK08 70 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 VDAC3Q9Y277 283 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 TMEM14AQ9Y6G1 99 aa6.21□□□□□ -1.42
TRIM55-203ENST00000350034 HECTD1Q9ULT8 2610 aa6.2□□□□□ -1.42
TRIM55-203ENST00000350034 FRYLO94915 3013 aa6.2□□□□□ -1.42
TRIM55-203ENST00000350034 hCG_2014768A0A024R1R8 64 aa6.2□□□□□ -1.42
TRIM55-203ENST00000350034 ARPC4-TTLL3A0A0A6YYG9 625 aa6.2□□□□□ -1.42
TRIM55-203ENST00000350034 TRBV2A0A0J9YWF9 115 aa6.2□□□□□ -1.42
TRIM55-203ENST00000350034 TRBV5-5A0A0J9YX44 114 aa6.2□□□□□ -1.42
TRIM55-203ENST00000350034 FUOMA2VDF0 154 aa6.2□□□□□ -1.42
TRIM55-203ENST00000350034 SMIM30A4D0T7 59 aa6.2□□□□□ -1.42
TRIM55-203ENST00000350034 OR4C45A6NMZ5 311 aa6.2□□□□□ -1.42
TRIM55-203ENST00000350034 CENPBD1B2RD01 187 aa6.2□□□□□ -1.42
TRIM55-203ENST00000350034 SHISA8B8ZZ34 492 aa6.2□□□□□ -1.42
TRIM55-203ENST00000350034 C21orf140B9A014 251 aa6.2□□□□□ -1.42
TRIM55-203ENST00000350034 FAM47E-STBD1D6RA91 191 aa6.2□□□□□ -1.42
TRIM55-203ENST00000350034 RGS5O15539 181 aa6.2□□□□□ -1.42
TRIM55-203ENST00000350034 ZIC3O60481 467 aa6.2□□□□□ -1.42
TRIM55-203ENST00000350034 SLC16A7O60669 478 aa6.2□□□□□ -1.42
TRIM55-203ENST00000350034 ZFPL1O95159 310 aa6.2□□□□□ -1.42
TRIM55-203ENST00000350034 PLGP00747 810 aaPredicted RBP6.2□□□□□ -1.42
TRIM55-203ENST00000350034 TACSTD2P09758 323 aa6.2□□□□□ -1.42
TRIM55-203ENST00000350034 JMJD7P0C870 316 aa6.2□□□□□ -1.42
TRIM55-203ENST00000350034 OR8G3PP0DMU2 310 aa6.2□□□□□ -1.42
TRIM55-203ENST00000350034 TFPIP10646 304 aa6.2□□□□□ -1.42
TRIM55-203ENST00000350034 IFNGR1P15260 489 aa6.2□□□□□ -1.42
TRIM55-203ENST00000350034 TCN2P20062 427 aa6.2□□□□□ -1.42
TRIM55-203ENST00000350034 AHCYP23526 432 aa6.2□□□□□ -1.42
TRIM55-203ENST00000350034 MYL9P24844 172 aa6.2□□□□□ -1.42
TRIM55-203ENST00000350034 EDNRAP25101 427 aa6.2□□□□□ -1.42
TRIM55-203ENST00000350034 CRABP1P29762 137 aa6.2□□□□□ -1.42
TRIM55-203ENST00000350034 PSMB10P40306 273 aa6.2□□□□□ -1.42
TRIM55-203ENST00000350034 EVX1P49640 407 aa6.2□□□□□ -1.42
TRIM55-203ENST00000350034 DAP3P51398 398 aaKnown RBP6.2□□□□□ -1.42
TRIM55-203ENST00000350034 CLDN6P56747 220 aa6.2□□□□□ -1.42
TRIM55-203ENST00000350034 RPS18P62269 152 aaKnown RBP6.2□□□□□ -1.42
TRIM55-203ENST00000350034 FOXK1P85037 733 aa6.2□□□□□ -1.42
TRIM55-203ENST00000350034 HSF1Q00613 529 aa6.2□□□□□ -1.42
TRIM55-203ENST00000350034 TLE3Q04726 772 aa6.2□□□□□ -1.42
TRIM55-203ENST00000350034 MYBPHQ13203 477 aa6.2□□□□□ -1.42
TRIM55-203ENST00000350034 DNASE1L3Q13609 305 aa6.2□□□□□ -1.42
TRIM55-203ENST00000350034 ALKBH1Q13686 389 aaKnown RBP6.2□□□□□ -1.42
TRIM55-203ENST00000350034 MELKQ14680 651 aa6.2□□□□□ -1.42
TRIM55-203ENST00000350034 YIF1BQ5BJH7 314 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms