RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 LURAP1LQ8IV03 231 aa11.6□□□□□ -0.55
CLK3-201ENST00000345005 OR11G2Q8NGC1 345 aa11.6□□□□□ -0.55
CLK3-201ENST00000345005 LRRC20Q8TCA0 184 aa11.6□□□□□ -0.55
CLK3-201ENST00000345005 ZNF524Q96C55 264 aa11.6□□□□□ -0.55
CLK3-201ENST00000345005 ERMAPQ96PL5 475 aaPredicted RBP11.6□□□□□ -0.55
CLK3-201ENST00000345005 SORCS2Q96PQ0 1159 aa11.6□□□□□ -0.55
CLK3-201ENST00000345005 KLHDC3Q9BQ90 382 aa11.6□□□□□ -0.55
CLK3-201ENST00000345005 NCDNQ9UBB6 729 aa11.6□□□□□ -0.55
CLK3-201ENST00000345005 ATPIF1Q9UII2 106 aa11.6□□□□□ -0.55
CLK3-201ENST00000345005 SCP2D1Q9UJQ7 156 aa11.6□□□□□ -0.55
CLK3-201ENST00000345005 TCFL5Q9UL49 500 aa11.6□□□□□ -0.55
CLK3-201ENST00000345005 FKBP7Q9Y680 259 aa11.6□□□□□ -0.55
CLK3-201ENST00000345005 ZFHX2Q9C0A1 2572 aaPredicted RBP11.59□□□□□ -0.55
CLK3-201ENST00000345005 NSG1A0A0A6YYJ2 146 aa11.59□□□□□ -0.55
CLK3-201ENST00000345005 CD8B2A6NJW9 211 aa11.59□□□□□ -0.55
CLK3-201ENST00000345005 LRRN3E7EW58 273 aa11.59□□□□□ -0.55
CLK3-201ENST00000345005 CTDSPLO15194 276 aa11.59□□□□□ -0.55
CLK3-201ENST00000345005 PLPP2O43688 288 aa11.59□□□□□ -0.55
CLK3-201ENST00000345005 SLC25A12O75746 678 aa11.59□□□□□ -0.55
CLK3-201ENST00000345005 HIST1H2ABP04908 130 aa11.59□□□□□ -0.55
CLK3-201ENST00000345005 CD8BP10966 210 aa11.59□□□□□ -0.55
CLK3-201ENST00000345005 ICAM2P13598 275 aa11.59□□□□□ -0.55
CLK3-201ENST00000345005 RPL4P36578 427 aaKnown RBP11.59□□□□□ -0.55
CLK3-201ENST00000345005 SNRPD2P62316 118 aaKnown RBP11.59□□□□□ -0.55
CLK3-201ENST00000345005 RPS15P62841 145 aaKnown RBP11.59□□□□□ -0.55
CLK3-201ENST00000345005 GALEQ14376 348 aa11.59□□□□□ -0.55
CLK3-201ENST00000345005 FCN2Q15485 313 aa11.59□□□□□ -0.55
CLK3-201ENST00000345005 TRIP6Q15654 476 aaKnown RBP11.59□□□□□ -0.55
CLK3-201ENST00000345005 HIST3H2AQ7L7L0 130 aa11.59□□□□□ -0.55
CLK3-201ENST00000345005 TIPARPQ7Z3E1 657 aaKnown RBP11.59□□□□□ -0.55
CLK3-201ENST00000345005 KLBQ86Z14 1044 aa11.59□□□□□ -0.55
CLK3-201ENST00000345005 TOMM5Q8N4H5 51 aa11.59□□□□□ -0.55
CLK3-201ENST00000345005 OR4M2Q8NGB6 313 aa11.59□□□□□ -0.55
CLK3-201ENST00000345005 OR4F15Q8NGB8 312 aa11.59□□□□□ -0.55
CLK3-201ENST00000345005 CT55Q8WUE5 264 aa11.59□□□□□ -0.55
CLK3-201ENST00000345005 ST8SIA1Q92185 356 aa11.59□□□□□ -0.55
CLK3-201ENST00000345005 HIST1H2ACQ93077 130 aa11.59□□□□□ -0.55
CLK3-201ENST00000345005 SPACA9Q96E40 222 aaPredicted RBP11.59□□□□□ -0.55
CLK3-201ENST00000345005 RASL10BQ96S79 203 aa11.59□□□□□ -0.55
CLK3-201ENST00000345005 KLRF1Q9NZS2 232 aa11.59□□□□□ -0.55
CLK3-201ENST00000345005 CHRNA9Q9UGM1 479 aa11.59□□□□□ -0.55
CLK3-201ENST00000345005 UBQLN2Q9UHD9 624 aa11.59□□□□□ -0.55
CLK3-201ENST00000345005 ZNF222Q9UK12 451 aa11.59□□□□□ -0.55
CLK3-201ENST00000345005 FARSAQ9Y285 508 aaKnown RBP11.59□□□□□ -0.55
CLK3-201ENST00000345005 TRAV36DV7A0A075B6V5 113 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 TMED7-TICAM2A0A0A6YYA0 188 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 TRAV1-2A0A0B4J238 106 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 TEX13CA0A0J9YWL9 993 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 NAP1L6A6NFF2 107 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 SLC22A31A6NKX4 558 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 FAM183AA6NL82 134 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 C17orf51A8MQB3 221 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 C9orf172C9J069 976 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 TRIM77I1YAP6 450 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 SOCS6O14544 535 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 TP53I11O14683 189 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 ARPC3O15145 178 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 GSTZ1O43708 216 aaPredicted RBP11.58□□□□□ -0.56
CLK3-201ENST00000345005 TCRBP04435 133 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 ASAH2BP0C7U1 165 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 B2MP61769 119 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 POU4F2Q12837 409 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 SSPNQ14714 243 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 BCL2L15Q5TBC7 163 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 NIPAL3Q6P499 406 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 OPN5Q6U736 354 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 C5orf46Q6UWT4 87 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 DHRS13Q6UX07 377 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 BTN2A1Q7KYR7 527 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 PIP4P1Q86T03 277 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 LSRQ86X29 649 aaPredicted RBP11.58□□□□□ -0.56
CLK3-201ENST00000345005 OR8H3Q8N146 312 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 ZFP41Q8N8Y5 198 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 BBS1Q8NFJ9 593 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 OR10Z1Q8NGY1 313 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 OR56B4Q8NH76 319 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 PHYHIPQ92561 330 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 PTP4A1Q93096 173 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 NXPE2Q96DL1 559 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 PPIL3Q9H2H8 161 aaKnown RBP11.58□□□□□ -0.56
CLK3-201ENST00000345005 METTL7AQ9H8H3 244 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 FKRPQ9H9S5 495 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 HIF3AQ9Y2N7 669 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 SLC6A5Q9Y345 797 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 TMED7Q9Y3B3 224 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 IER3IP1Q9Y5U9 82 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 OTOGLQ3ZCN5 2332 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 DAPL1A0PJW8 107 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 PMS2P1A4D2B8 440 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 MCIDASD6RGH6 385 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 BLOC1S5-TXNDC5H3BN57 136 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 LRRTM2O43300 516 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 SUSD5O60279 629 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 DKK1O94907 266 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 LALBAP00709 142 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 CLDN6P56747 220 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 ACTC1P68032 377 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 ACTA1P68133 377 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 SNTA1Q13424 505 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 ZNF791Q3KP31 576 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms