RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 MALSU1Q96EH3 234 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 ZNF681Q96N22 645 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 C1orf123Q9NWV4 160 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 CGGBP1Q9UFW8 167 aaPredicted RBP12.64□□□□□ -0.39
RTN4-202ENST00000337526 SLC23A2Q9UGH3 650 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 XIRP1Q702N8 1843 aaKnown RBP12.63□□□□□ -0.39
RTN4-202ENST00000337526 TRAPPC2LH3BP13 241 aa12.63□□□□□ -0.39
RTN4-202ENST00000337526 FGF17O60258 216 aa12.63□□□□□ -0.39
RTN4-202ENST00000337526 CHATP28329 748 aa12.63□□□□□ -0.39
RTN4-202ENST00000337526 KANSL1Q7Z3B3 1105 aa12.63□□□□□ -0.39
RTN4-202ENST00000337526 NKAIN3Q8N8D7 197 aa12.63□□□□□ -0.39
RTN4-202ENST00000337526 BBS1Q8NFJ9 593 aa12.63□□□□□ -0.39
RTN4-202ENST00000337526 PXT1Q8NFP0 134 aa12.63□□□□□ -0.39
RTN4-202ENST00000337526 ASB16Q96NS5 453 aa12.63□□□□□ -0.39
RTN4-202ENST00000337526 ACAD8Q9UKU7 415 aa12.63□□□□□ -0.39
RTN4-202ENST00000337526 RAB22AQ9UL26 194 aa12.63□□□□□ -0.39
RTN4-202ENST00000337526 SHROOM3Q8TF72 1996 aa12.63□□□□□ -0.39
RTN4-202ENST00000337526 RPS10-NUDT3A0A1W2PQS6 291 aa12.63□□□□□ -0.39
RTN4-202ENST00000337526 TNFRSF10CO14798 259 aa12.63□□□□□ -0.39
RTN4-202ENST00000337526 TXNL1O43396 289 aa12.63□□□□□ -0.39
RTN4-202ENST00000337526 RPS10P46783 165 aaKnown RBP12.63□□□□□ -0.39
RTN4-202ENST00000337526 EBPQ15125 230 aaKnown RBP12.63□□□□□ -0.39
RTN4-202ENST00000337526 TMEM201Q5SNT2 666 aa12.63□□□□□ -0.39
RTN4-202ENST00000337526 MARCH3Q86UD3 253 aa12.63□□□□□ -0.39
RTN4-202ENST00000337526 VN1R2Q8NFZ6 395 aa12.63□□□□□ -0.39
RTN4-202ENST00000337526 ARHGAP9Q9BRR9 750 aa12.63□□□□□ -0.39
RTN4-202ENST00000337526 PAPOLGQ9BWT3 736 aaKnown RBP12.63□□□□□ -0.39
RTN4-202ENST00000337526 MCOLN1Q9GZU1 580 aa12.63□□□□□ -0.39
RTN4-202ENST00000337526 QPCTLQ9NXS2 382 aa12.63□□□□□ -0.39
RTN4-202ENST00000337526 THSD7AQ9UPZ6 1657 aa12.63□□□□□ -0.39
RTN4-202ENST00000337526 TLCD2A6NGC4 264 aa12.63□□□□□ -0.39
RTN4-202ENST00000337526 BET1O15155 118 aa12.63□□□□□ -0.39
RTN4-202ENST00000337526 IRF2P14316 349 aa12.63□□□□□ -0.39
RTN4-202ENST00000337526 OMGP23515 440 aa12.63□□□□□ -0.39
RTN4-202ENST00000337526 CPT2P23786 658 aa12.63□□□□□ -0.39
RTN4-202ENST00000337526 ERVK-16P61578 105 aa12.63□□□□□ -0.39
RTN4-202ENST00000337526 LPAL2Q16609 132 aa12.63□□□□□ -0.39
RTN4-202ENST00000337526 BAK1Q16611 211 aa12.63□□□□□ -0.39
RTN4-202ENST00000337526 C1orf140Q5VVS0 124 aa12.63□□□□□ -0.39
RTN4-202ENST00000337526 DCXRQ7Z4W1 244 aa12.63□□□□□ -0.39
RTN4-202ENST00000337526 ANGPTL5Q86XS5 388 aa12.63□□□□□ -0.39
RTN4-202ENST00000337526 OR9K2Q8NGE7 335 aa12.63□□□□□ -0.39
RTN4-202ENST00000337526 SPAG17Q6Q759 2223 aa12.62□□□□□ -0.39
RTN4-202ENST00000337526 LINC01553A4QN01 128 aa12.62□□□□□ -0.39
RTN4-202ENST00000337526 TOR1AO14656 332 aa12.62□□□□□ -0.39
RTN4-202ENST00000337526 MAGEB4O15481 346 aaPredicted RBP12.62□□□□□ -0.39
RTN4-202ENST00000337526 CD79BP40259 229 aa12.62□□□□□ -0.39
RTN4-202ENST00000337526 C9orf135Q5VTT2 229 aa12.62□□□□□ -0.39
RTN4-202ENST00000337526 NPSR1Q6W5P4 371 aa12.62□□□□□ -0.39
RTN4-202ENST00000337526 RHBDD1Q8TEB9 315 aa12.62□□□□□ -0.39
RTN4-202ENST00000337526 PSMF1Q92530 271 aa12.62□□□□□ -0.39
RTN4-202ENST00000337526 ANKRD61A6NGH8 418 aa12.62□□□□□ -0.39
RTN4-202ENST00000337526 H0Y8X5 98 aa12.62□□□□□ -0.39
RTN4-202ENST00000337526 MRPL33O75394 65 aaKnown RBP12.62□□□□□ -0.39
RTN4-202ENST00000337526 KCNK2O95069 426 aa12.62□□□□□ -0.39
RTN4-202ENST00000337526 NAGAP17050 411 aa12.62□□□□□ -0.39
RTN4-202ENST00000337526 NME2P22392 152 aa12.62□□□□□ -0.39
RTN4-202ENST00000337526 DIO1P49895 249 aa12.62□□□□□ -0.39
RTN4-202ENST00000337526 B4GALNT1Q00973 533 aa12.62□□□□□ -0.39
RTN4-202ENST00000337526 IAH1Q2TAA2 248 aaPredicted RBP12.62□□□□□ -0.39
RTN4-202ENST00000337526 LYSMD4Q5XG99 296 aa12.62□□□□□ -0.39
RTN4-202ENST00000337526 CAMKMTQ7Z624 323 aa12.62□□□□□ -0.39
RTN4-202ENST00000337526 FAM174AQ8TBP5 190 aa12.62□□□□□ -0.39
RTN4-202ENST00000337526 CPT1CQ8TCG5 803 aa12.62□□□□□ -0.39
RTN4-202ENST00000337526 SLC25A19Q9HC21 320 aa12.62□□□□□ -0.39
RTN4-202ENST00000337526 FAM186AA6NE01 2351 aa12.62□□□□□ -0.39
RTN4-202ENST00000337526 PHIPQ8WWQ0 1821 aa12.62□□□□□ -0.39
RTN4-202ENST00000337526 OR5K3A6NET4 321 aa12.62□□□□□ -0.39
RTN4-202ENST00000337526 MT-CO2P00403 227 aa12.62□□□□□ -0.39
RTN4-202ENST00000337526 MT-ATP6P00846 226 aa12.62□□□□□ -0.39
RTN4-202ENST00000337526 RAF1P04049 648 aa12.62□□□□□ -0.39
RTN4-202ENST00000337526 IL32P24001 234 aa12.62□□□□□ -0.39
RTN4-202ENST00000337526 GZMKP49863 264 aa12.62□□□□□ -0.39
RTN4-202ENST00000337526 GABREP78334 506 aa12.62□□□□□ -0.39
RTN4-202ENST00000337526 OR10R2Q8NGX6 335 aa12.62□□□□□ -0.39
RTN4-202ENST00000337526 ZNF845Q96IR2 970 aaPredicted RBP12.62□□□□□ -0.39
RTN4-202ENST00000337526 TCEAL2Q9H3H9 227 aaPredicted RBP12.62□□□□□ -0.39
RTN4-202ENST00000337526 IL21Q9HBE4 155 aa12.62□□□□□ -0.39
RTN4-202ENST00000337526 COA3Q9Y2R0 106 aaPredicted RBP12.62□□□□□ -0.39
RTN4-202ENST00000337526 LAMB1P07942 1786 aa12.62□□□□□ -0.39
RTN4-202ENST00000337526 UPK1AO00322 258 aa12.62□□□□□ -0.39
RTN4-202ENST00000337526 MSTNO14793 375 aa12.62□□□□□ -0.39
RTN4-202ENST00000337526 BCAT2O15382 392 aaPredicted RBP12.62□□□□□ -0.39
RTN4-202ENST00000337526 CALCBP10092 127 aa12.62□□□□□ -0.39
RTN4-202ENST00000337526 CD53P19397 219 aa12.62□□□□□ -0.39
RTN4-202ENST00000337526 XAF1Q6GPH4 301 aa12.62□□□□□ -0.39
RTN4-202ENST00000337526 AAED1Q7RTV5 226 aa12.62□□□□□ -0.39
RTN4-202ENST00000337526 SGK3Q96BR1 496 aa12.62□□□□□ -0.39
RTN4-202ENST00000337526 SLIRPQ9GZT3 109 aaKnown RBP12.62□□□□□ -0.39
RTN4-202ENST00000337526 DNAJB11Q9UBS4 358 aa12.62□□□□□ -0.39
RTN4-202ENST00000337526 WIF1Q9Y5W5 379 aa12.62□□□□□ -0.39
RTN4-202ENST00000337526 NSA2O95478 260 aaKnown RBP12.61□□□□□ -0.39
RTN4-202ENST00000337526 SPI1P17947 270 aa12.61□□□□□ -0.39
RTN4-202ENST00000337526 GCH1P30793 250 aa12.61□□□□□ -0.39
RTN4-202ENST00000337526 SOX18P35713 384 aa12.61□□□□□ -0.39
RTN4-202ENST00000337526 ADPRHP54922 357 aa12.61□□□□□ -0.39
RTN4-202ENST00000337526 NR0B2Q15466 257 aa12.61□□□□□ -0.39
RTN4-202ENST00000337526 FCRL6Q6DN72 434 aa12.61□□□□□ -0.39
RTN4-202ENST00000337526 MDGA2Q7Z553 956 aa12.61□□□□□ -0.39
RTN4-202ENST00000337526 SCARB1Q8WTV0 552 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms