RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 HNF4GQ14541 408 aa12.18□□□□□ -0.46
COL2A1-201ENST00000337299 MEX3BQ6ZN04 569 aaKnown RBP12.18□□□□□ -0.46
COL2A1-201ENST00000337299 ZNF619Q8N2I2 560 aa12.18□□□□□ -0.46
COL2A1-201ENST00000337299 EID2Q8N6I1 236 aa12.18□□□□□ -0.46
COL2A1-201ENST00000337299 OR5K2Q8NHB8 316 aa12.18□□□□□ -0.46
COL2A1-201ENST00000337299 HAS2Q92819 552 aa12.18□□□□□ -0.46
COL2A1-201ENST00000337299 OR8D2Q9GZM6 311 aa12.18□□□□□ -0.46
COL2A1-201ENST00000337299 KPTNQ9Y664 436 aa12.18□□□□□ -0.46
COL2A1-201ENST00000337299 CDK5Q00535 292 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 SLC22A6Q4U2R8 563 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 TMEM35AQ53FP2 167 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 ASPGQ86U10 573 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 CAMKVQ8NCB2 501 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 OR4D11Q8NGI4 311 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 RXFP4Q8TDU9 374 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 MARVELD3Q96A59 401 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 SMIM19Q96E16 107 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 Q96M85 177 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 RAB11FIP5Q9BXF6 653 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 SLC5A7Q9GZV3 580 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 FAM212BQ9NTI7 297 aaPredicted RBP12.17□□□□□ -0.46
COL2A1-201ENST00000337299 A0A0U1RQK1 487 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 MFSD2BA6NFX1 497 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 NPIPA5E9PKD4 350 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 CRTAPO75718 401 aaPredicted RBP12.17□□□□□ -0.46
COL2A1-201ENST00000337299 AQP8O94778 261 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 WISP3O95389 354 aaPredicted RBP12.17□□□□□ -0.46
COL2A1-201ENST00000337299 S100GP29377 79 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 GDI1P31150 447 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 RAG2P55895 527 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 HERV-K104P61576 105 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 RAE1P78406 368 aaKnown RBP12.17□□□□□ -0.46
COL2A1-201ENST00000337299 FAM219AQ8IW50 185 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 DGAT2Q96PD7 388 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 MS4A8Q9BY19 250 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 NPIPA1Q9UND3 350 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 LSM2Q9Y333 95 aaKnown RBP12.17□□□□□ -0.46
COL2A1-201ENST00000337299 IDSB3KWA1 339 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 DPM1O60762 260 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 HTR2CP28335 458 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 CSRP3P50461 194 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 SLC18B1Q6NT16 456 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 OVCH2Q7RTZ1 564 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 SFXN5Q8TD22 340 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 URM1Q9BTM9 101 aaKnown RBP12.17□□□□□ -0.46
COL2A1-201ENST00000337299 ING1Q9UK53 422 aaPredicted RBP12.17□□□□□ -0.46
COL2A1-201ENST00000337299 KCNE3Q9Y6H6 103 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 COL4A5P29400 1685 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 KDM4EB2RXH2 506 aaPredicted RBP12.17□□□□□ -0.46
COL2A1-201ENST00000337299 RNASEK-C17orf49H0YIS7 233 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 KCNAB3O43448 404 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 MBP02144 154 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 APODP05090 189 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 EMP2P54851 167 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 IAH1Q2TAA2 248 aaPredicted RBP12.17□□□□□ -0.46
COL2A1-201ENST00000337299 ALG11Q2TAA5 492 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 B3GNTL1Q67FW5 361 aaPredicted RBP12.17□□□□□ -0.46
COL2A1-201ENST00000337299 C5orf46Q6UWT4 87 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 UBAC2Q8NBM4 344 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 OR4K15Q8NH41 348 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 IRF7Q92985 503 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 JSRP1Q96MG2 331 aaPredicted RBP12.17□□□□□ -0.46
COL2A1-201ENST00000337299 CASD1Q96PB1 797 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 PRSS16Q9NQE7 514 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 STEAP1Q9UHE8 339 aa12.17□□□□□ -0.46
COL2A1-201ENST00000337299 A0A1B0GWA3 101 aa12.16□□□□□ -0.46
COL2A1-201ENST00000337299 A6NLC8 198 aa12.16□□□□□ -0.46
COL2A1-201ENST00000337299 LRP3O75074 770 aa12.16□□□□□ -0.46
COL2A1-201ENST00000337299 NSA2O95478 260 aaKnown RBP12.16□□□□□ -0.46
COL2A1-201ENST00000337299 HIST1H1CP16403 213 aaKnown RBP12.16□□□□□ -0.46
COL2A1-201ENST00000337299 TYRP1P17643 537 aa12.16□□□□□ -0.46
COL2A1-201ENST00000337299 RAB28P51157 221 aa12.16□□□□□ -0.46
COL2A1-201ENST00000337299 GPR18Q14330 331 aa12.16□□□□□ -0.46
COL2A1-201ENST00000337299 ZNF626Q68DY1 528 aa12.16□□□□□ -0.46
COL2A1-201ENST00000337299 RGS7BPQ6MZT1 257 aaPredicted RBP12.16□□□□□ -0.46
COL2A1-201ENST00000337299 OR4S1Q8NGB4 309 aa12.16□□□□□ -0.46
COL2A1-201ENST00000337299 HGDQ93099 445 aa12.16□□□□□ -0.46
COL2A1-201ENST00000337299 FAM71F1Q96KD3 344 aaPredicted RBP12.16□□□□□ -0.46
COL2A1-201ENST00000337299 GPA33Q99795 319 aa12.16□□□□□ -0.46
COL2A1-201ENST00000337299 TRIOBPQ9H2D6 2365 aa12.16□□□□□ -0.46
COL2A1-201ENST00000337299 OR6C76A6NM76 312 aa12.16□□□□□ -0.46
COL2A1-201ENST00000337299 PRAMEF4O60810 478 aa12.16□□□□□ -0.46
COL2A1-201ENST00000337299 AKR7A3O95154 331 aa12.16□□□□□ -0.46
COL2A1-201ENST00000337299 QDPRP09417 244 aa12.16□□□□□ -0.46
COL2A1-201ENST00000337299 ZNF888P0CJ79 500 aaPredicted RBP12.16□□□□□ -0.46
COL2A1-201ENST00000337299 PCBP4P57723 403 aaKnown RBP12.16□□□□□ -0.46
COL2A1-201ENST00000337299 TAS2R31P59538 309 aa12.16□□□□□ -0.46
COL2A1-201ENST00000337299 ALKBH1Q13686 389 aaKnown RBP12.16□□□□□ -0.46
COL2A1-201ENST00000337299 CLEC12BQ2HXU8 276 aa12.16□□□□□ -0.46
COL2A1-201ENST00000337299 PRAMEF9Q5VWM5 478 aa12.16□□□□□ -0.46
COL2A1-201ENST00000337299 C11orf87Q6NUJ2 197 aa12.16□□□□□ -0.46
COL2A1-201ENST00000337299 POM121Q96HA1 1249 aa12.16□□□□□ -0.46
COL2A1-201ENST00000337299 CMC2Q9NRP2 79 aa12.16□□□□□ -0.46
COL2A1-201ENST00000337299 POLR2AP24928 1970 aaKnown RBP12.16□□□□□ -0.46
COL2A1-201ENST00000337299 PEX12O00623 359 aa12.16□□□□□ -0.46
COL2A1-201ENST00000337299 SLC16A7O60669 478 aa12.16□□□□□ -0.46
COL2A1-201ENST00000337299 PRLHRP49683 370 aa12.16□□□□□ -0.46
COL2A1-201ENST00000337299 ELAVL1Q15717 326 aaKnown RBP12.16□□□□□ -0.46
COL2A1-201ENST00000337299 SGPP2Q8IWX5 399 aa12.16□□□□□ -0.46
COL2A1-201ENST00000337299 FIBINQ8TAL6 211 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms