RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 THEM6Q8WUY1 208 aa19.07■□□□□ 0.64
ATG4D-201ENST00000309469 TXNDC15Q96J42 360 aa19.07■□□□□ 0.64
ATG4D-201ENST00000309469 FOXN4Q96NZ1 517 aa19.07■□□□□ 0.64
ATG4D-201ENST00000309469 PARD6AQ9NPB6 346 aa19.07■□□□□ 0.64
ATG4D-201ENST00000309469 RPH3AQ9Y2J0 694 aaPredicted RBP19.07■□□□□ 0.64
ATG4D-201ENST00000309469 ZNF593O00488 134 aaPredicted RBP19.06■□□□□ 0.64
ATG4D-201ENST00000309469 PHYHO14832 338 aa19.06■□□□□ 0.64
ATG4D-201ENST00000309469 GPRIN2O60269 458 aa19.06■□□□□ 0.64
ATG4D-201ENST00000309469 UPK3AO75631 287 aa19.06■□□□□ 0.64
ATG4D-201ENST00000309469 CFL1P23528 166 aaKnown RBP19.06■□□□□ 0.64
ATG4D-201ENST00000309469 MYL9P24844 172 aa19.06■□□□□ 0.64
ATG4D-201ENST00000309469 RPS27P42677 84 aaKnown RBP19.06■□□□□ 0.64
ATG4D-201ENST00000309469 BCAP31P51572 246 aa19.06■□□□□ 0.64
ATG4D-201ENST00000309469 EGR3Q06889 387 aa19.06■□□□□ 0.64
ATG4D-201ENST00000309469 TMEM176BQ3YBM2 270 aaPredicted RBP19.06■□□□□ 0.64
ATG4D-201ENST00000309469 ZMAT1Q5H9K5 638 aa19.06■□□□□ 0.64
ATG4D-201ENST00000309469 LIPNQ5VXI9 398 aa19.06■□□□□ 0.64
ATG4D-201ENST00000309469 TIGD3Q6B0B8 471 aa19.06■□□□□ 0.64
ATG4D-201ENST00000309469 YIPF7Q8N8F6 280 aa19.06■□□□□ 0.64
ATG4D-201ENST00000309469 OTOSQ8NHW6 89 aa19.06■□□□□ 0.64
ATG4D-201ENST00000309469 SNRNP27Q8WVK2 155 aaKnown RBP19.06■□□□□ 0.64
ATG4D-201ENST00000309469 TMEM41AQ96HV5 264 aa19.06■□□□□ 0.64
ATG4D-201ENST00000309469 JSRP1Q96MG2 331 aaPredicted RBP19.06■□□□□ 0.64
ATG4D-201ENST00000309469 PDCD1LG2Q9BQ51 273 aa19.06■□□□□ 0.64
ATG4D-201ENST00000309469 CCDC32Q9BV29 185 aa19.06■□□□□ 0.64
ATG4D-201ENST00000309469 ANKRD10Q9NXR5 420 aa19.06■□□□□ 0.64
ATG4D-201ENST00000309469 B3GAT1Q9P2W7 334 aa19.06■□□□□ 0.64
ATG4D-201ENST00000309469 HDGFL3Q9Y3E1 203 aa19.06■□□□□ 0.64
ATG4D-201ENST00000309469 V9GYH0 126 aa19.06■□□□□ 0.64
ATG4D-201ENST00000309469 TTC28Q96AY4 2481 aa19.06■□□□□ 0.64
ATG4D-201ENST00000309469 CFAP54Q96N23 3096 aa19.06■□□□□ 0.64
ATG4D-201ENST00000309469 TNFSF15O95150 251 aa19.06■□□□□ 0.64
ATG4D-201ENST00000309469 ABHD16AO95870 558 aa19.06■□□□□ 0.64
ATG4D-201ENST00000309469 SFTPDP35247 375 aa19.06■□□□□ 0.64
ATG4D-201ENST00000309469 NANOS3P60323 173 aaKnown RBP19.06■□□□□ 0.64
ATG4D-201ENST00000309469 RPS11P62280 158 aaKnown RBP eCLIP19.06■□□□□ 0.64
ATG4D-201ENST00000309469 MRPL28Q13084 256 aaKnown RBP19.06■□□□□ 0.64
ATG4D-201ENST00000309469 ACER2Q5QJU3 275 aa19.06■□□□□ 0.64
ATG4D-201ENST00000309469 TPRA1Q86W33 373 aa19.06■□□□□ 0.64
ATG4D-201ENST00000309469 NR2C2APQ86WQ0 139 aa19.06■□□□□ 0.64
ATG4D-201ENST00000309469 WDFY1Q8IWB7 410 aa19.06■□□□□ 0.64
ATG4D-201ENST00000309469 HAVCR2Q8TDQ0 301 aa19.06■□□□□ 0.64
ATG4D-201ENST00000309469 KCNK17Q96T54 332 aa19.06■□□□□ 0.64
ATG4D-201ENST00000309469 MRPL22Q9NWU5 206 aaKnown RBP19.06■□□□□ 0.64
ATG4D-201ENST00000309469 MED29Q9NX70 200 aa19.06■□□□□ 0.64
ATG4D-201ENST00000309469 COMMD3Q9UBI1 195 aa19.06■□□□□ 0.64
ATG4D-201ENST00000309469 TRAPPC4Q9Y296 219 aa19.06■□□□□ 0.64
ATG4D-201ENST00000309469 RAD1O60671 282 aa19.05■□□□□ 0.64
ATG4D-201ENST00000309469 RPP14O95059 124 aaKnown RBP19.05■□□□□ 0.64
ATG4D-201ENST00000309469 PSKH1P11801 424 aa19.05■□□□□ 0.64
ATG4D-201ENST00000309469 NHLRC1Q6VVB1 395 aa19.05■□□□□ 0.64
ATG4D-201ENST00000309469 ZNF554Q86TJ5 538 aa19.05■□□□□ 0.64
ATG4D-201ENST00000309469 POC5Q8NA72 575 aa19.05■□□□□ 0.64
ATG4D-201ENST00000309469 SDHCQ99643 169 aaPredicted RBP19.05■□□□□ 0.64
ATG4D-201ENST00000309469 SP140LQ9H930 580 aa19.05■□□□□ 0.64
ATG4D-201ENST00000309469 KCNG2Q9UJ96 466 aa19.05■□□□□ 0.64
ATG4D-201ENST00000309469 IKZF2Q9UKS7 526 aa19.05■□□□□ 0.64
ATG4D-201ENST00000309469 COA3Q9Y2R0 106 aaPredicted RBP19.05■□□□□ 0.64
ATG4D-201ENST00000309469 CENPBD1B2RD01 187 aa19.04■□□□□ 0.64
ATG4D-201ENST00000309469 ZIC3O60481 467 aa19.04■□□□□ 0.64
ATG4D-201ENST00000309469 CBR3O75828 277 aa19.04■□□□□ 0.64
ATG4D-201ENST00000309469 GATBO75879 557 aaKnown RBP19.04■□□□□ 0.64
ATG4D-201ENST00000309469 P2RY4P51582 365 aa19.04■□□□□ 0.64
ATG4D-201ENST00000309469 PPP3R1P63098 170 aa19.04■□□□□ 0.64
ATG4D-201ENST00000309469 GLO1Q04760 184 aa19.04■□□□□ 0.64
ATG4D-201ENST00000309469 OTPQ5XKR4 325 aa19.04■□□□□ 0.64
ATG4D-201ENST00000309469 DNM1P34Q6PK57 102 aa19.04■□□□□ 0.64
ATG4D-201ENST00000309469 GLRX5Q86SX6 157 aa19.04■□□□□ 0.64
ATG4D-201ENST00000309469 PSMF1Q92530 271 aa19.04■□□□□ 0.64
ATG4D-201ENST00000309469 SACM1LQ9NTJ5 587 aa19.04■□□□□ 0.64
ATG4D-201ENST00000309469 ING1Q9UK53 422 aaPredicted RBP19.04■□□□□ 0.64
ATG4D-201ENST00000309469 DKKL1Q9UK85 242 aa19.04■□□□□ 0.64
ATG4D-201ENST00000309469 ZNF281Q9Y2X9 895 aa19.04■□□□□ 0.64
ATG4D-201ENST00000309469 PCSK5Q92824 1860 aa19.04■□□□□ 0.64
ATG4D-201ENST00000309469 LOC101059948A0A1B0GTJ6 334 aa19.04■□□□□ 0.64
ATG4D-201ENST00000309469 P04436 131 aa19.04■□□□□ 0.64
ATG4D-201ENST00000309469 MZT2AQ6P582 158 aa19.04■□□□□ 0.64
ATG4D-201ENST00000309469 UNQ9370/PRO34162Q6UXP9 181 aa19.04■□□□□ 0.64
ATG4D-201ENST00000309469 UEVLDQ8IX04 471 aa19.04■□□□□ 0.64
ATG4D-201ENST00000309469 DIRAS2Q96HU8 199 aa19.04■□□□□ 0.64
ATG4D-201ENST00000309469 AMELYQ99218 206 aa19.04■□□□□ 0.64
ATG4D-201ENST00000309469 TRAV1-2A0A0B4J238 106 aa19.03■□□□□ 0.64
ATG4D-201ENST00000309469 ARL6IP5O75915 188 aa19.03■□□□□ 0.64
ATG4D-201ENST00000309469 ZFPL1O95159 310 aa19.03■□□□□ 0.64
ATG4D-201ENST00000309469 BIDP55957 195 aa19.03■□□□□ 0.64
ATG4D-201ENST00000309469 TMPPEQ6ZT21 453 aa19.03■□□□□ 0.64
ATG4D-201ENST00000309469 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.03■□□□□ 0.64
ATG4D-201ENST00000309469 RAB43Q86YS6 212 aa19.03■□□□□ 0.64
ATG4D-201ENST00000309469 ASB17Q8WXJ9 295 aa19.03■□□□□ 0.64
ATG4D-201ENST00000309469 ACOT12Q8WYK0 555 aa19.03■□□□□ 0.64
ATG4D-201ENST00000309469 HSD17B8Q92506 261 aa19.03■□□□□ 0.64
ATG4D-201ENST00000309469 MIB2Q96AX9 1013 aa19.03■□□□□ 0.64
ATG4D-201ENST00000309469 MAP6Q96JE9 813 aa19.03■□□□□ 0.64
ATG4D-201ENST00000309469 FAM117AQ9C073 453 aa19.03■□□□□ 0.64
ATG4D-201ENST00000309469 SLCO1C1Q9NYB5 712 aa19.03■□□□□ 0.64
ATG4D-201ENST00000309469 MRPS18BQ9Y676 258 aaKnown RBP19.03■□□□□ 0.64
ATG4D-201ENST00000309469 A0A1W2PPK0 400 aa19.02■□□□□ 0.64
ATG4D-201ENST00000309469 SULT2B1O00204 365 aa19.02■□□□□ 0.64
ATG4D-201ENST00000309469 SEC14L5O43304 696 aa19.02■□□□□ 0.64
ATG4D-201ENST00000309469 SPARCP09486 303 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms