RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 CLDN4O14493 209 aa11.57□□□□□ -0.56
RETREG3-201ENST00000309428 CD3DP04234 171 aa11.57□□□□□ -0.56
RETREG3-201ENST00000309428 SNRNP70P08621 437 aaKnown RBP11.57□□□□□ -0.56
RETREG3-201ENST00000309428 GLULP15104 373 aa11.57□□□□□ -0.56
RETREG3-201ENST00000309428 RBM34P42696 430 aaKnown RBP11.57□□□□□ -0.56
RETREG3-201ENST00000309428 VWA2Q5GFL6 755 aa11.57□□□□□ -0.56
RETREG3-201ENST00000309428 UBE2NLQ5JXB2 153 aa11.57□□□□□ -0.56
RETREG3-201ENST00000309428 ZNF585AQ6P3V2 769 aa11.57□□□□□ -0.56
RETREG3-201ENST00000309428 TMEM205Q6UW68 189 aa11.57□□□□□ -0.56
RETREG3-201ENST00000309428 ZNF619Q8N2I2 560 aa11.57□□□□□ -0.56
RETREG3-201ENST00000309428 TSLPQ969D9 159 aa11.57□□□□□ -0.56
RETREG3-201ENST00000309428 OR2A5Q96R48 311 aa11.57□□□□□ -0.56
RETREG3-201ENST00000309428 S100A13Q99584 98 aa11.57□□□□□ -0.56
RETREG3-201ENST00000309428 MCOLN1Q9GZU1 580 aa11.57□□□□□ -0.56
RETREG3-201ENST00000309428 PTTG3PQ9NZH4 202 aa11.57□□□□□ -0.56
RETREG3-201ENST00000309428 KCNE5Q9UJ90 142 aa11.57□□□□□ -0.56
RETREG3-201ENST00000309428 TRAV20A0A0B4J274 112 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 RHPN2P1A8MT19 583 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 CTNSO60931 367 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 HTR3BO95264 441 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 RENP00797 406 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 RAB3AP20336 220 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 IL13RA1P78552 427 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 RBMS2Q15434 407 aaKnown RBP11.56□□□□□ -0.56
RETREG3-201ENST00000309428 AADACL4Q5VUY2 407 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 SEZ6L2Q6UXD5 910 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 CBLN2Q8IUK8 224 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 BPIFB2Q8N4F0 458 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 ZNF321PQ8N8H1 164 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 TMED6Q8WW62 240 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 SORCS2Q96PQ0 1159 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 SEC61A2Q9H9S3 476 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 SHOXO15266 292 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 FRKP42685 505 aaPredicted RBP11.56□□□□□ -0.56
RETREG3-201ENST00000309428 SLC9A3R2Q15599 337 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 BAIAP2L2Q6UXY1 529 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 PEG10Q86TG7 708 aaKnown RBP11.56□□□□□ -0.56
RETREG3-201ENST00000309428 SCMH1Q96GD3 660 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 ZNF75AQ96N20 296 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 FOXQ1Q9C009 403 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 Q9N2J8 555 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 ACKR4Q9NPB9 350 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 NPFFR2Q9Y5X5 522 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 TMEM82A0PJX8 343 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 LINC00862A6NCI5 91 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 FAM74A7A6NL05 159 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 ZNF736B4DX44 427 aaPredicted RBP11.56□□□□□ -0.56
RETREG3-201ENST00000309428 SSX5O60225 188 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 PPM1BO75688 479 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 KNG1P01042 644 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 PI3P19957 117 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 EPHA4P54764 986 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 CHAF1BQ13112 559 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 DYRK1AQ13627 763 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 FAM74A3Q4VXF1 159 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 FCRL6Q6DN72 434 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 SLC25A24Q6NUK1 477 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 RCBTB1Q8NDN9 531 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 NPRL2Q8WTW4 380 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 ZBTB8AQ96BR9 441 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 S100PBPQ96BU1 408 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 SERINC2Q96SA4 455 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 MESP1Q9BRJ9 268 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 FSCN3Q9NQT6 498 aa11.56□□□□□ -0.56
RETREG3-201ENST00000309428 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 SOX1O00570 391 aaPredicted RBP11.55□□□□□ -0.56
RETREG3-201ENST00000309428 TNFSF12O43508 249 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 PLRG1O43660 514 aaKnown RBP11.55□□□□□ -0.56
RETREG3-201ENST00000309428 ADAM11O75078 769 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 ZNF254O75437 659 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 ICAM2P13598 275 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 ZNF823P16415 610 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 GABRG2P18507 467 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 CXCL2P19875 107 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 PPT1P50897 306 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 NR0B1P51843 470 aaKnown RBP11.55□□□□□ -0.56
RETREG3-201ENST00000309428 TAS2R20P59543 309 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 DECR1Q16698 335 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 EXOSC6Q5RKV6 272 aaKnown RBP11.55□□□□□ -0.56
RETREG3-201ENST00000309428 LIPNQ5VXI9 398 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 CBLN3Q6UW01 205 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 LHFPL5Q8TAF8 219 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 SLC25A44Q96H78 314 aaPredicted RBP11.55□□□□□ -0.56
RETREG3-201ENST00000309428 EIF5A2Q9GZV4 153 aaKnown RBP11.55□□□□□ -0.56
RETREG3-201ENST00000309428 FLRT3Q9NZU0 649 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 KCND3Q9UK17 655 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 VDAC3Q9Y277 283 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 MRPS33Q9Y291 106 aaKnown RBP11.55□□□□□ -0.56
RETREG3-201ENST00000309428 PLXNB3Q9ULL4 1909 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 RAB19A4D1S5 217 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 C17orf105B2RV13 164 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 DPM1O60762 260 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 AKAIN1P0CW23 69 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 TMIGD3P0DMS9 266 aaPredicted RBP11.55□□□□□ -0.56
RETREG3-201ENST00000309428 GLI4P10075 376 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 IFNGR1P15260 489 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 NDUFS1P28331 727 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 TOMM20Q15388 145 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 USF2Q15853 346 aaPredicted RBP11.55□□□□□ -0.56
RETREG3-201ENST00000309428 PAN3Q58A45 887 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms