RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 FOXN4Q96NZ1 517 aa11.59□□□□□ -0.55
CCDC7-202ENST00000302316 MFRPQ9BY79 579 aa11.59□□□□□ -0.55
CCDC7-202ENST00000302316 TTTY10Q9BZA0 68 aa11.59□□□□□ -0.55
CCDC7-202ENST00000302316 YIPF3Q9GZM5 350 aa11.59□□□□□ -0.55
CCDC7-202ENST00000302316 DEFB127Q9H1M4 99 aa11.59□□□□□ -0.55
CCDC7-202ENST00000302316 TSPAN10Q9H1Z9 355 aaPredicted RBP11.59□□□□□ -0.55
CCDC7-202ENST00000302316 LDAHQ9H6V9 325 aa11.59□□□□□ -0.55
CCDC7-202ENST00000302316 EXO5Q9H790 373 aa11.59□□□□□ -0.55
CCDC7-202ENST00000302316 ACKR4Q9NPB9 350 aa11.59□□□□□ -0.55
CCDC7-202ENST00000302316 TIGARQ9NQ88 270 aa11.59□□□□□ -0.55
CCDC7-202ENST00000302316 DKK4Q9UBT3 224 aa11.59□□□□□ -0.55
CCDC7-202ENST00000302316 PCDHGA9Q9Y5G4 932 aaKnown RBP11.59□□□□□ -0.55
CCDC7-202ENST00000302316 LIPGQ9Y5X9 500 aa11.59□□□□□ -0.55
CCDC7-202ENST00000302316 APC2O95996 2303 aa11.58□□□□□ -0.56
CCDC7-202ENST00000302316 ZNF726A6NNF4 738 aa11.58□□□□□ -0.56
CCDC7-202ENST00000302316 TFECO14948 347 aaPredicted RBP11.58□□□□□ -0.56
CCDC7-202ENST00000302316 GPANK1O95872 356 aa11.58□□□□□ -0.56
CCDC7-202ENST00000302316 ZNF24P17028 368 aa11.58□□□□□ -0.56
CCDC7-202ENST00000302316 CLDN17P56750 224 aa11.58□□□□□ -0.56
CCDC7-202ENST00000302316 CLDN18P56856 261 aa11.58□□□□□ -0.56
CCDC7-202ENST00000302316 SRYQ05066 204 aa11.58□□□□□ -0.56
CCDC7-202ENST00000302316 CAMK2DQ13557 499 aa11.58□□□□□ -0.56
CCDC7-202ENST00000302316 SSX6Q7RTT6 188 aa11.58□□□□□ -0.56
CCDC7-202ENST00000302316 SLC16A9Q7RTY1 509 aa11.58□□□□□ -0.56
CCDC7-202ENST00000302316 TIGD4Q8IY51 512 aa11.58□□□□□ -0.56
CCDC7-202ENST00000302316 RFLNBQ8N5W9 214 aa11.58□□□□□ -0.56
CCDC7-202ENST00000302316 MEIOBQ8N635 442 aa11.58□□□□□ -0.56
CCDC7-202ENST00000302316 ZNF485Q8NCK3 441 aa11.58□□□□□ -0.56
CCDC7-202ENST00000302316 OR9K2Q8NGE7 335 aa11.58□□□□□ -0.56
CCDC7-202ENST00000302316 OR6X1Q8NH79 312 aa11.58□□□□□ -0.56
CCDC7-202ENST00000302316 ABTB1Q969K4 478 aaPredicted RBP11.58□□□□□ -0.56
CCDC7-202ENST00000302316 SLC25A44Q96H78 314 aaPredicted RBP11.58□□□□□ -0.56
CCDC7-202ENST00000302316 ARHGAP9Q9BRR9 750 aa11.58□□□□□ -0.56
CCDC7-202ENST00000302316 FRYQ5TBA9 3013 aa11.58□□□□□ -0.56
CCDC7-202ENST00000302316 AHCYL1O43865 530 aa11.57□□□□□ -0.56
CCDC7-202ENST00000302316 PGA4P0DJD7 388 aa11.57□□□□□ -0.56
CCDC7-202ENST00000302316 PGA3P0DJD8 388 aa11.57□□□□□ -0.56
CCDC7-202ENST00000302316 ZNF708P17019 499 aa11.57□□□□□ -0.56
CCDC7-202ENST00000302316 GADD45AP24522 165 aa11.57□□□□□ -0.56
CCDC7-202ENST00000302316 BLVRAP53004 296 aa11.57□□□□□ -0.56
CCDC7-202ENST00000302316 SLC17A1Q14916 467 aa11.57□□□□□ -0.56
CCDC7-202ENST00000302316 ETFDHQ16134 617 aa11.57□□□□□ -0.56
CCDC7-202ENST00000302316 SSX1Q16384 188 aa11.57□□□□□ -0.56
CCDC7-202ENST00000302316 LIPKQ5VXJ0 399 aa11.57□□□□□ -0.56
CCDC7-202ENST00000302316 CARD17Q5XLA6 110 aa11.57□□□□□ -0.56
CCDC7-202ENST00000302316 VASNQ6EMK4 673 aa11.57□□□□□ -0.56
CCDC7-202ENST00000302316 CREB3L2Q70SY1 520 aa11.57□□□□□ -0.56
CCDC7-202ENST00000302316 OR6N2Q8NGY6 317 aa11.57□□□□□ -0.56
CCDC7-202ENST00000302316 NEIL3Q8TAT5 605 aa11.57□□□□□ -0.56
CCDC7-202ENST00000302316 ROBO4Q8WZ75 1007 aa11.57□□□□□ -0.56
CCDC7-202ENST00000302316 ZNF845Q96IR2 970 aaPredicted RBP11.57□□□□□ -0.56
CCDC7-202ENST00000302316 ADAD1Q96M93 576 aaKnown RBP11.57□□□□□ -0.56
CCDC7-202ENST00000302316 INTS14Q96SY0 518 aa11.57□□□□□ -0.56
CCDC7-202ENST00000302316 SF3B5Q9BWJ5 86 aaKnown RBP11.57□□□□□ -0.56
CCDC7-202ENST00000302316 MRPL13Q9BYD1 178 aaKnown RBP11.57□□□□□ -0.56
CCDC7-202ENST00000302316 ZDHHC11Q9H8X9 412 aa11.57□□□□□ -0.56
CCDC7-202ENST00000302316 ISG20L2Q9H9L3 353 aaKnown RBP11.57□□□□□ -0.56
CCDC7-202ENST00000302316 COPS3Q9UNS2 423 aa11.57□□□□□ -0.56
CCDC7-202ENST00000302316 KIAA1549Q9HCM3 1950 aa11.57□□□□□ -0.56
CCDC7-202ENST00000302316 SPTBN4Q9H254 2564 aa11.57□□□□□ -0.56
CCDC7-202ENST00000302316 TRGV5A0A0B4J1U4 118 aa11.57□□□□□ -0.56
CCDC7-202ENST00000302316 PNMA8CA0A1B0GUJ8 204 aa11.57□□□□□ -0.56
CCDC7-202ENST00000302316 AKAP8O43823 692 aaKnown RBP11.57□□□□□ -0.56
CCDC7-202ENST00000302316 ATE1O95260 518 aa11.57□□□□□ -0.56
CCDC7-202ENST00000302316 ACTL6AO96019 429 aa11.57□□□□□ -0.56
CCDC7-202ENST00000302316 RPS3AP61247 264 aaKnown RBP11.57□□□□□ -0.56
CCDC7-202ENST00000302316 LSM3P62310 102 aaKnown RBP11.57□□□□□ -0.56
CCDC7-202ENST00000302316 GLO1Q04760 184 aa11.57□□□□□ -0.56
CCDC7-202ENST00000302316 CTF1Q16619 201 aa11.57□□□□□ -0.56
CCDC7-202ENST00000302316 IGFL3Q6UXB1 125 aa11.57□□□□□ -0.56
CCDC7-202ENST00000302316 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.57□□□□□ -0.56
CCDC7-202ENST00000302316 KLBQ86Z14 1044 aa11.57□□□□□ -0.56
CCDC7-202ENST00000302316 UFD1Q92890 307 aa11.57□□□□□ -0.56
CCDC7-202ENST00000302316 RPL3LQ92901 407 aaKnown RBP11.57□□□□□ -0.56
CCDC7-202ENST00000302316 C4orf36Q96KX1 117 aa11.57□□□□□ -0.56
CCDC7-202ENST00000302316 ZNF385AQ96PM9 386 aaKnown RBP11.57□□□□□ -0.56
CCDC7-202ENST00000302316 RBP7Q96R05 134 aa11.57□□□□□ -0.56
CCDC7-202ENST00000302316 BCL7BQ9BQE9 202 aa11.57□□□□□ -0.56
CCDC7-202ENST00000302316 WDR76Q9H967 626 aa11.57□□□□□ -0.56
CCDC7-202ENST00000302316 ISYNA1Q9NPH2 558 aa11.57□□□□□ -0.56
CCDC7-202ENST00000302316 COA3Q9Y2R0 106 aaPredicted RBP11.57□□□□□ -0.56
CCDC7-202ENST00000302316 ZNF670-ZNF695F2Z2N8 137 aa11.56□□□□□ -0.56
CCDC7-202ENST00000302316 AIREO43918 545 aa11.56□□□□□ -0.56
CCDC7-202ENST00000302316 KHDRBS3O75525 346 aaKnown RBP11.56□□□□□ -0.56
CCDC7-202ENST00000302316 LALBAP00709 142 aa11.56□□□□□ -0.56
CCDC7-202ENST00000302316 MT-ND5P03915 603 aa11.56□□□□□ -0.56
CCDC7-202ENST00000302316 ACTA2P62736 377 aa11.56□□□□□ -0.56
CCDC7-202ENST00000302316 ACTG2P63267 376 aa11.56□□□□□ -0.56
CCDC7-202ENST00000302316 ZNF169Q14929 603 aaPredicted RBP11.56□□□□□ -0.56
CCDC7-202ENST00000302316 ABLIM2Q6H8Q1 611 aa11.56□□□□□ -0.56
CCDC7-202ENST00000302316 ZFP41Q8N8Y5 198 aa11.56□□□□□ -0.56
CCDC7-202ENST00000302316 SNX33Q8WV41 574 aa11.56□□□□□ -0.56
CCDC7-202ENST00000302316 NSMAFQ92636 917 aa11.56□□□□□ -0.56
CCDC7-202ENST00000302316 MRPL48Q96GC5 212 aaKnown RBP11.56□□□□□ -0.56
CCDC7-202ENST00000302316 TIMP4Q99727 224 aa11.56□□□□□ -0.56
CCDC7-202ENST00000302316 MARCH7Q9H992 704 aa11.56□□□□□ -0.56
CCDC7-202ENST00000302316 SLC24A3Q9HC58 644 aa11.56□□□□□ -0.56
CCDC7-202ENST00000302316 NDUFB11Q9NX14 153 aa11.56□□□□□ -0.56
CCDC7-202ENST00000302316 PTTG2Q9NZH5 202 aa11.56□□□□□ -0.56
CCDC7-202ENST00000302316 ALPK2Q86TB3 2170 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms