RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 BIDP55957 195 aa14.61□□□□□ -0.07
TPM1-201ENST00000267996 CLDN20P56880 219 aa14.61□□□□□ -0.07
TPM1-201ENST00000267996 POU4F3Q15319 338 aa14.61□□□□□ -0.07
TPM1-201ENST00000267996 RSPO4Q2I0M5 234 aaPredicted RBP14.61□□□□□ -0.07
TPM1-201ENST00000267996 IGFL2Q6UWQ7 119 aa14.61□□□□□ -0.07
TPM1-201ENST00000267996 OR6X1Q8NH79 312 aa14.61□□□□□ -0.07
TPM1-201ENST00000267996 TBC1D15Q8TC07 691 aa14.61□□□□□ -0.07
TPM1-201ENST00000267996 ADGRG7Q96K78 797 aa14.61□□□□□ -0.07
TPM1-201ENST00000267996 INTS14Q96SY0 518 aa14.61□□□□□ -0.07
TPM1-201ENST00000267996 NAA11Q9BSU3 229 aaPredicted RBP14.61□□□□□ -0.07
TPM1-201ENST00000267996 TTTY12Q9BZ98 90 aa14.61□□□□□ -0.07
TPM1-201ENST00000267996 PMF1-BGLAPU3KQ54 211 aa14.61□□□□□ -0.07
TPM1-201ENST00000267996 TRDV1A0A1B0GX56 115 aa14.61□□□□□ -0.07
TPM1-201ENST00000267996 CENPBD1B2RD01 187 aa14.61□□□□□ -0.07
TPM1-201ENST00000267996 TNFSF11O14788 317 aa14.61□□□□□ -0.07
TPM1-201ENST00000267996 PLPP2O43688 288 aa14.61□□□□□ -0.07
TPM1-201ENST00000267996 GFRA3O60609 400 aa14.61□□□□□ -0.07
TPM1-201ENST00000267996 CLPXO76031 633 aa14.61□□□□□ -0.07
TPM1-201ENST00000267996 VAMP5O95183 116 aa14.61□□□□□ -0.07
TPM1-201ENST00000267996 CD46P15529 392 aa14.61□□□□□ -0.07
TPM1-201ENST00000267996 FGF9P31371 208 aaPredicted RBP14.61□□□□□ -0.07
TPM1-201ENST00000267996 PEX19P40855 299 aa14.61□□□□□ -0.07
TPM1-201ENST00000267996 CD97P48960 835 aa14.61□□□□□ -0.07
TPM1-201ENST00000267996 RAC3P60763 192 aa14.61□□□□□ -0.07
TPM1-201ENST00000267996 DGUOKQ16854 277 aa14.61□□□□□ -0.07
TPM1-201ENST00000267996 DNM1P34Q6PK57 102 aa14.61□□□□□ -0.07
TPM1-201ENST00000267996 ESPNLQ6ZVH7 1005 aa14.61□□□□□ -0.07
TPM1-201ENST00000267996 HDDC2Q7Z4H3 204 aa14.61□□□□□ -0.07
TPM1-201ENST00000267996 GALNTL5Q7Z4T8 443 aa14.61□□□□□ -0.07
TPM1-201ENST00000267996 PELI1Q96FA3 418 aa14.61□□□□□ -0.07
TPM1-201ENST00000267996 COQ7Q99807 217 aa14.61□□□□□ -0.07
TPM1-201ENST00000267996 SLIRPQ9GZT3 109 aaKnown RBP14.61□□□□□ -0.07
TPM1-201ENST00000267996 WDR76Q9H967 626 aa14.61□□□□□ -0.07
TPM1-201ENST00000267996 SIAEQ9HAT2 523 aa14.61□□□□□ -0.07
TPM1-201ENST00000267996 MRPL22Q9NWU5 206 aaKnown RBP14.61□□□□□ -0.07
TPM1-201ENST00000267996 TXNL4BQ9NX01 149 aaKnown RBP14.61□□□□□ -0.07
TPM1-201ENST00000267996 KLHDC2Q9Y2U9 406 aa14.61□□□□□ -0.07
TPM1-201ENST00000267996 PNMA8CA0A1B0GUJ8 204 aa14.6□□□□□ -0.07
TPM1-201ENST00000267996 DCDC2BA2VCK2 349 aa14.6□□□□□ -0.07
TPM1-201ENST00000267996 PRR32B1ATL7 298 aa14.6□□□□□ -0.07
TPM1-201ENST00000267996 KLRC4-KLRK1H3BQV0 150 aa14.6□□□□□ -0.07
TPM1-201ENST00000267996 OGG1O15527 345 aa14.6□□□□□ -0.07
TPM1-201ENST00000267996 LRRTM2O43300 516 aa14.6□□□□□ -0.07
TPM1-201ENST00000267996 GPANK1O95872 356 aa14.6□□□□□ -0.07
TPM1-201ENST00000267996 GAAP10253 952 aa14.6□□□□□ -0.07
TPM1-201ENST00000267996 ZNF43P17038 809 aa14.6□□□□□ -0.07
TPM1-201ENST00000267996 ALOX5APP20292 161 aa14.6□□□□□ -0.07
TPM1-201ENST00000267996 GALP22466 123 aa14.6□□□□□ -0.07
TPM1-201ENST00000267996 ETFDHQ16134 617 aa14.6□□□□□ -0.07
TPM1-201ENST00000267996 TP53I3Q53FA7 332 aa14.6□□□□□ -0.07
TPM1-201ENST00000267996 DMKNQ6E0U4 476 aaPredicted RBP14.6□□□□□ -0.07
TPM1-201ENST00000267996 LINC00299Q6ZSB3 139 aa14.6□□□□□ -0.07
TPM1-201ENST00000267996 TMEM251Q8N6I4 163 aa14.6□□□□□ -0.07
TPM1-201ENST00000267996 ZFP62Q8NB50 900 aaPredicted RBP14.6□□□□□ -0.07
TPM1-201ENST00000267996 SYT14Q8NB59 555 aa14.6□□□□□ -0.07
TPM1-201ENST00000267996 SNX33Q8WV41 574 aa14.6□□□□□ -0.07
TPM1-201ENST00000267996 TMEM203Q969S6 136 aa14.6□□□□□ -0.07
TPM1-201ENST00000267996 SLC25A44Q96H78 314 aaPredicted RBP14.6□□□□□ -0.07
TPM1-201ENST00000267996 TM9SF2Q99805 663 aa14.6□□□□□ -0.07
TPM1-201ENST00000267996 EMC6Q9BV81 110 aa14.6□□□□□ -0.07
TPM1-201ENST00000267996 SRXN1Q9BYN0 137 aa14.6□□□□□ -0.07
TPM1-201ENST00000267996 RERGLQ9H628 205 aa14.6□□□□□ -0.07
TPM1-201ENST00000267996 EXOSC4Q9NPD3 245 aaKnown RBP14.6□□□□□ -0.07
TPM1-201ENST00000267996 ST6GALNAC2Q9UJ37 374 aa14.6□□□□□ -0.07
TPM1-201ENST00000267996 H0YC42 278 aa14.59□□□□□ -0.07
TPM1-201ENST00000267996 KHDRBS3O75525 346 aaKnown RBP14.59□□□□□ -0.07
TPM1-201ENST00000267996 CEACAM4O75871 244 aa14.59□□□□□ -0.07
TPM1-201ENST00000267996 PGA4P0DJD7 388 aa14.59□□□□□ -0.07
TPM1-201ENST00000267996 PGA3P0DJD8 388 aa14.59□□□□□ -0.07
TPM1-201ENST00000267996 SERPINB10P48595 397 aa14.59□□□□□ -0.07
TPM1-201ENST00000267996 MEOX1P50221 254 aa14.59□□□□□ -0.07
TPM1-201ENST00000267996 CCL11P51671 97 aa14.59□□□□□ -0.07
TPM1-201ENST00000267996 CLDN15P56746 228 aa14.59□□□□□ -0.07
TPM1-201ENST00000267996 FABP5Q01469 135 aa14.59□□□□□ -0.07
TPM1-201ENST00000267996 GLO1Q04760 184 aa14.59□□□□□ -0.07
TPM1-201ENST00000267996 KCTD20Q7Z5Y7 419 aa14.59□□□□□ -0.07
TPM1-201ENST00000267996 GPAT4Q86UL3 456 aa14.59□□□□□ -0.07
TPM1-201ENST00000267996 FDCSPQ8NFU4 85 aa14.59□□□□□ -0.07
TPM1-201ENST00000267996 OR2V1Q8NHB1 315 aa14.59□□□□□ -0.07
TPM1-201ENST00000267996 ADAD1Q96M93 576 aaKnown RBP14.59□□□□□ -0.07
TPM1-201ENST00000267996 UCN2Q96RP3 112 aa14.59□□□□□ -0.07
TPM1-201ENST00000267996 QPCTLQ9NXS2 382 aa14.59□□□□□ -0.07
TPM1-201ENST00000267996 CCDC59Q9P031 241 aaKnown RBP14.59□□□□□ -0.07
TPM1-201ENST00000267996 KLK13Q9UKR3 277 aa14.59□□□□□ -0.07
TPM1-201ENST00000267996 COA3Q9Y2R0 106 aaPredicted RBP14.59□□□□□ -0.07
TPM1-201ENST00000267996 TMEM14AQ9Y6G1 99 aa14.59□□□□□ -0.07
TPM1-201ENST00000267996 KIAA1549Q9HCM3 1950 aa14.59□□□□□ -0.07
TPM1-201ENST00000267996 IGKV1D-43A0A0B4J1Z2 117 aa14.58□□□□□ -0.07
TPM1-201ENST00000267996 SLC35F4A4IF30 521 aa14.58□□□□□ -0.07
TPM1-201ENST00000267996 MAGEB4O15481 346 aaPredicted RBP14.58□□□□□ -0.07
TPM1-201ENST00000267996 EFSO43281 561 aa14.58□□□□□ -0.07
TPM1-201ENST00000267996 ABHD16AO95870 558 aa14.58□□□□□ -0.07
TPM1-201ENST00000267996 IGHG1P01857 330 aa14.58□□□□□ -0.07
TPM1-201ENST00000267996 HLA-DPB1P04440 258 aa14.58□□□□□ -0.07
TPM1-201ENST00000267996 CD1AP06126 327 aa14.58□□□□□ -0.07
TPM1-201ENST00000267996 PSKH1P11801 424 aa14.58□□□□□ -0.07
TPM1-201ENST00000267996 POU3F2P20265 443 aaPredicted RBP14.58□□□□□ -0.07
TPM1-201ENST00000267996 STARP49675 285 aa14.58□□□□□ -0.07
TPM1-201ENST00000267996 TNFSF10P50591 281 aa14.58□□□□□ -0.07
TPM1-201ENST00000267996 GBX2P52951 348 aaPredicted RBP14.58□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms