RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 FRYLO94915 3013 aa23.1■■□□□ 1.29
RAB40C-201ENST00000248139 TRBV5-5A0A0J9YX44 114 aa23.1■■□□□ 1.29
RAB40C-201ENST00000248139 SCO1O75880 301 aa23.1■■□□□ 1.29
RAB40C-201ENST00000248139 DDAH2O95865 285 aa23.1■■□□□ 1.29
RAB40C-201ENST00000248139 PNPP00491 289 aa23.1■■□□□ 1.29
RAB40C-201ENST00000248139 RAG2P55895 527 aa23.1■■□□□ 1.29
RAB40C-201ENST00000248139 TSPAN5P62079 268 aa23.1■■□□□ 1.29
RAB40C-201ENST00000248139 CLPPQ16740 277 aaPredicted RBP23.1■■□□□ 1.29
RAB40C-201ENST00000248139 EEF1A1P5Q5VTE0 462 aa23.1■■□□□ 1.29
RAB40C-201ENST00000248139 C9orf40Q8IXQ3 194 aa23.1■■□□□ 1.29
RAB40C-201ENST00000248139 UXS1Q8NBZ7 420 aa23.1■■□□□ 1.29
RAB40C-201ENST00000248139 ZNF721Q8TF20 911 aa23.1■■□□□ 1.29
RAB40C-201ENST00000248139 TSEN15Q8WW01 171 aaKnown RBP23.1■■□□□ 1.29
RAB40C-201ENST00000248139 ZNF285Q96NJ3 590 aa23.1■■□□□ 1.29
RAB40C-201ENST00000248139 MYEF2Q9P2K5 600 aaKnown RBP23.1■■□□□ 1.29
RAB40C-201ENST00000248139 ELOCQ15369 112 aa23.09■■□□□ 1.29
RAB40C-201ENST00000248139 ESCO2Q56NI9 601 aa23.09■■□□□ 1.29
RAB40C-201ENST00000248139 SMRP1Q8NCR6 262 aa23.09■■□□□ 1.29
RAB40C-201ENST00000248139 LIPHQ8WWY8 451 aa23.09■■□□□ 1.29
RAB40C-201ENST00000248139 KLHL15Q96M94 604 aa23.09■■□□□ 1.29
RAB40C-201ENST00000248139 MRPL39Q9NYK5 338 aaKnown RBP23.09■■□□□ 1.29
RAB40C-201ENST00000248139 CDC40O60508 579 aaKnown RBP eCLIP23.09■■□□□ 1.29
RAB40C-201ENST00000248139 SIX6O95475 246 aa23.09■■□□□ 1.29
RAB40C-201ENST00000248139 SNTA1Q13424 505 aa23.09■■□□□ 1.29
RAB40C-201ENST00000248139 SQSTM1Q13501 440 aa23.09■■□□□ 1.29
RAB40C-201ENST00000248139 MELKQ14680 651 aa23.09■■□□□ 1.29
RAB40C-201ENST00000248139 SIX5Q8N196 739 aa23.09■■□□□ 1.29
RAB40C-201ENST00000248139 ADAM19Q9H013 955 aa23.09■■□□□ 1.29
RAB40C-201ENST00000248139 A0A1B0GVI7 797 aa23.08■■□□□ 1.29
RAB40C-201ENST00000248139 MPZL1O95297 269 aa23.08■■□□□ 1.29
RAB40C-201ENST00000248139 ECDO95905 644 aaPredicted RBP23.08■■□□□ 1.29
RAB40C-201ENST00000248139 IL12BP29460 328 aa23.08■■□□□ 1.29
RAB40C-201ENST00000248139 LCN1P31025 176 aa23.08■■□□□ 1.29
RAB40C-201ENST00000248139 TCTE1Q5JU00 501 aa23.08■■□□□ 1.29
RAB40C-201ENST00000248139 KCTD20Q7Z5Y7 419 aa23.08■■□□□ 1.29
RAB40C-201ENST00000248139 SLC46A1Q96NT5 459 aa23.08■■□□□ 1.29
RAB40C-201ENST00000248139 NPAS1Q99742 590 aa23.08■■□□□ 1.29
RAB40C-201ENST00000248139 PYCARD-AS1I3L0S3 204 aa23.08■■□□□ 1.29
RAB40C-201ENST00000248139 SLC16A7O60669 478 aa23.08■■□□□ 1.29
RAB40C-201ENST00000248139 TXNDC12O95881 172 aa23.08■■□□□ 1.29
RAB40C-201ENST00000248139 ITGA5P08648 1049 aa23.08■■□□□ 1.29
RAB40C-201ENST00000248139 SPARCP09486 303 aa23.08■■□□□ 1.29
RAB40C-201ENST00000248139 CALCBP10092 127 aa23.08■■□□□ 1.29
RAB40C-201ENST00000248139 APEHP13798 732 aaKnown RBP23.08■■□□□ 1.29
RAB40C-201ENST00000248139 OR1D5P58170 312 aa23.08■■□□□ 1.29
RAB40C-201ENST00000248139 PCGF3Q3KNV8 242 aa23.08■■□□□ 1.29
RAB40C-201ENST00000248139 TOR2AQ5JU69 321 aa23.08■■□□□ 1.29
RAB40C-201ENST00000248139 PLPP7Q8NBV4 271 aa23.08■■□□□ 1.29
RAB40C-201ENST00000248139 DVL3Q92997 716 aaPredicted RBP23.08■■□□□ 1.29
RAB40C-201ENST00000248139 CMTM3Q96MX0 182 aa23.08■■□□□ 1.29
RAB40C-201ENST00000248139 OR1F2PQ96R84 312 aa23.08■■□□□ 1.29
RAB40C-201ENST00000248139 COMMD4Q9H0A8 199 aa23.08■■□□□ 1.29
RAB40C-201ENST00000248139 ICMTO60725 284 aa23.07■■□□□ 1.28
RAB40C-201ENST00000248139 IGKV3-11P04433 115 aa23.07■■□□□ 1.28
RAB40C-201ENST00000248139 RAB40ALP0C0E4 278 aa23.07■■□□□ 1.28
RAB40C-201ENST00000248139 PUDPQ08623 228 aa23.07■■□□□ 1.28
RAB40C-201ENST00000248139 NSDHLQ15738 373 aa23.07■■□□□ 1.28
RAB40C-201ENST00000248139 GRK1Q15835 563 aa23.07■■□□□ 1.28
RAB40C-201ENST00000248139 ACKR1Q16570 336 aa23.07■■□□□ 1.28
RAB40C-201ENST00000248139 MEIOBQ8N635 442 aa23.07■■□□□ 1.28
RAB40C-201ENST00000248139 METTL21AQ8WXB1 218 aa23.07■■□□□ 1.28
RAB40C-201ENST00000248139 RAB40AQ8WXH6 277 aa23.07■■□□□ 1.28
RAB40C-201ENST00000248139 RBP7Q96R05 134 aa23.07■■□□□ 1.28
RAB40C-201ENST00000248139 AKAP7Q9P0M2 348 aaPredicted RBP23.07■■□□□ 1.28
RAB40C-201ENST00000248139 PIPOXQ9P0Z9 390 aa23.07■■□□□ 1.28
RAB40C-201ENST00000248139 IGHV3-20A0A0C4DH32 117 aa23.07■■□□□ 1.28
RAB40C-201ENST00000248139 H0YIG0 161 aa23.07■■□□□ 1.28
RAB40C-201ENST00000248139 BGLAPP02818 100 aa23.07■■□□□ 1.28
RAB40C-201ENST00000248139 IL11P20809 199 aa23.07■■□□□ 1.28
RAB40C-201ENST00000248139 AP3S2P59780 193 aa23.07■■□□□ 1.28
RAB40C-201ENST00000248139 OR8S1Q8NH09 359 aa23.07■■□□□ 1.28
RAB40C-201ENST00000248139 GPR148Q8TDV2 347 aa23.07■■□□□ 1.28
RAB40C-201ENST00000248139 ADAMTS18Q8TE60 1221 aa23.07■■□□□ 1.28
RAB40C-201ENST00000248139 NPDC1Q9NQX5 325 aaPredicted RBP23.07■■□□□ 1.28
RAB40C-201ENST00000248139 TLCD2A6NGC4 264 aa23.06■■□□□ 1.28
RAB40C-201ENST00000248139 ACOT7O00154 380 aa23.06■■□□□ 1.28
RAB40C-201ENST00000248139 XKRYO14609 159 aa23.06■■□□□ 1.28
RAB40C-201ENST00000248139 GLSO94925 669 aaPredicted RBP23.06■■□□□ 1.28
RAB40C-201ENST00000248139 CRYZL1O95825 349 aa23.06■■□□□ 1.28
RAB40C-201ENST00000248139 BIKQ13323 160 aa23.06■■□□□ 1.28
RAB40C-201ENST00000248139 CSRP2Q16527 193 aa23.06■■□□□ 1.28
RAB40C-201ENST00000248139 C2orf68Q2NKX9 166 aa23.06■■□□□ 1.28
RAB40C-201ENST00000248139 ASPHD2Q6ICH7 369 aa23.06■■□□□ 1.28
RAB40C-201ENST00000248139 OR7E24Q6IFN5 339 aa23.06■■□□□ 1.28
RAB40C-201ENST00000248139 BPHLQ86WA6 291 aaPredicted RBP23.06■■□□□ 1.28
RAB40C-201ENST00000248139 C17orf50Q8WW18 174 aa23.06■■□□□ 1.28
RAB40C-201ENST00000248139 C4orf45Q96LM5 186 aa23.06■■□□□ 1.28
RAB40C-201ENST00000248139 DMDP11532 3685 aa23.06■■□□□ 1.28
RAB40C-201ENST00000248139 IGHV1OR15-9A0A0B4J2B8 117 aa23.06■■□□□ 1.28
RAB40C-201ENST00000248139 TGM6O95932 706 aa23.06■■□□□ 1.28
RAB40C-201ENST00000248139 ZNF250P15622 560 aa23.06■■□□□ 1.28
RAB40C-201ENST00000248139 MAPK3P27361 379 aaPredicted RBP23.06■■□□□ 1.28
RAB40C-201ENST00000248139 EBPQ15125 230 aaKnown RBP23.06■■□□□ 1.28
RAB40C-201ENST00000248139 METTL11BQ5VVY1 283 aa23.06■■□□□ 1.28
RAB40C-201ENST00000248139 SEZ6L2Q6UXD5 910 aa23.06■■□□□ 1.28
RAB40C-201ENST00000248139 GLDNQ6ZMI3 551 aaPredicted RBP23.06■■□□□ 1.28
RAB40C-201ENST00000248139 OTOSQ8NHW6 89 aa23.06■■□□□ 1.28
RAB40C-201ENST00000248139 TBL1XR1Q9BZK7 514 aa23.06■■□□□ 1.28
RAB40C-201ENST00000248139 EXOSC3Q9NQT5 275 aaKnown RBP23.06■■□□□ 1.28
RAB40C-201ENST00000248139 KIF26BQ2KJY2 2108 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms