RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 A0A0G2JK05 382 aa20.89■□□□□ 0.94
MSX2-201ENST00000239243 NOTOA8MTQ0 251 aa20.89■□□□□ 0.94
MSX2-201ENST00000239243 FAM25AB3EWG3 89 aa20.89■□□□□ 0.94
MSX2-201ENST00000239243 FAM25CB3EWG5 89 aa20.89■□□□□ 0.94
MSX2-201ENST00000239243 FAM25GB3EWG6 89 aa20.89■□□□□ 0.94
MSX2-201ENST00000239243 RPP14O95059 124 aaKnown RBP20.89■□□□□ 0.94
MSX2-201ENST00000239243 ZFPL1O95159 310 aa20.89■□□□□ 0.94
MSX2-201ENST00000239243 IFNGR1P15260 489 aa20.89■□□□□ 0.94
MSX2-201ENST00000239243 CTLA4P16410 223 aa20.89■□□□□ 0.94
MSX2-201ENST00000239243 MLF1P58340 268 aa20.89■□□□□ 0.94
MSX2-201ENST00000239243 POU3F1Q03052 451 aaPredicted RBP20.89■□□□□ 0.94
MSX2-201ENST00000239243 SLC18B1Q6NT16 456 aa20.89■□□□□ 0.94
MSX2-201ENST00000239243 KDM8Q8N371 416 aa20.89■□□□□ 0.94
MSX2-201ENST00000239243 OR5AK2Q8NH90 309 aa20.89■□□□□ 0.94
MSX2-201ENST00000239243 PAQR8Q8TEZ7 354 aa20.89■□□□□ 0.94
MSX2-201ENST00000239243 TBC1D24Q9ULP9 559 aa20.89■□□□□ 0.94
MSX2-201ENST00000239243 ZNF593O00488 134 aaPredicted RBP20.89■□□□□ 0.93
MSX2-201ENST00000239243 CDX4O14627 284 aaPredicted RBP20.89■□□□□ 0.93
MSX2-201ENST00000239243 ZNF432O94892 652 aa20.89■□□□□ 0.93
MSX2-201ENST00000239243 MAPK3P27361 379 aaPredicted RBP20.89■□□□□ 0.93
MSX2-201ENST00000239243 THBS2P35442 1172 aa20.89■□□□□ 0.93
MSX2-201ENST00000239243 TALDO1P37837 337 aa20.89■□□□□ 0.93
MSX2-201ENST00000239243 OR10A3P58181 314 aa20.89■□□□□ 0.93
MSX2-201ENST00000239243 INPP5JQ15735 1006 aaPredicted RBP20.89■□□□□ 0.93
MSX2-201ENST00000239243 RNF166Q96A37 237 aaPredicted RBP20.89■□□□□ 0.93
MSX2-201ENST00000239243 TSPAN10Q9H1Z9 355 aaPredicted RBP20.89■□□□□ 0.93
MSX2-201ENST00000239243 PPP1R3EQ9H7J1 279 aa20.89■□□□□ 0.93
MSX2-201ENST00000239243 TEKT2Q9UIF3 430 aa20.89■□□□□ 0.93
MSX2-201ENST00000239243 MUC3AQ02505 3323 aa20.89■□□□□ 0.93
MSX2-201ENST00000239243 SEC14L5O43304 696 aa20.88■□□□□ 0.93
MSX2-201ENST00000239243 IL18Q14116 193 aa20.88■□□□□ 0.93
MSX2-201ENST00000239243 SSPNQ14714 243 aa20.88■□□□□ 0.93
MSX2-201ENST00000239243 SLC22A10Q63ZE4 541 aa20.88■□□□□ 0.93
MSX2-201ENST00000239243 KCTD18Q6PI47 426 aaPredicted RBP20.88■□□□□ 0.93
MSX2-201ENST00000239243 GDPD3Q7L5L3 318 aa20.88■□□□□ 0.93
MSX2-201ENST00000239243 ZNF454Q8N9F8 522 aa20.88■□□□□ 0.93
MSX2-201ENST00000239243 NSMAFQ92636 917 aa20.88■□□□□ 0.93
MSX2-201ENST00000239243 COMMD4Q9H0A8 199 aa20.88■□□□□ 0.93
MSX2-201ENST00000239243 ZCCHC4Q9H5U6 513 aa20.88■□□□□ 0.93
MSX2-201ENST00000239243 HPF1Q9NWY4 346 aa20.88■□□□□ 0.93
MSX2-201ENST00000239243 KCNG2Q9UJ96 466 aa20.88■□□□□ 0.93
MSX2-201ENST00000239243 HDGFL3Q9Y3E1 203 aa20.88■□□□□ 0.93
MSX2-201ENST00000239243 R4GN57 208 aa20.88■□□□□ 0.93
MSX2-201ENST00000239243 BDP1A6H8Y1 2624 aa20.88■□□□□ 0.93
MSX2-201ENST00000239243 A0A1W2PQ09 198 aa20.88■□□□□ 0.93
MSX2-201ENST00000239243 ANKRD61A6NGH8 418 aa20.88■□□□□ 0.93
MSX2-201ENST00000239243 PDCD5O14737 125 aa20.88■□□□□ 0.93
MSX2-201ENST00000239243 TMEM127O75204 238 aa20.88■□□□□ 0.93
MSX2-201ENST00000239243 GPANK1O95872 356 aa20.88■□□□□ 0.93
MSX2-201ENST00000239243 CSF3P09919 207 aa20.88■□□□□ 0.93
MSX2-201ENST00000239243 ADAM8P78325 824 aa20.88■□□□□ 0.93
MSX2-201ENST00000239243 RASGEF1BQ0VAM2 473 aa20.88■□□□□ 0.93
MSX2-201ENST00000239243 PPP1R32Q7Z5V6 425 aa20.88■□□□□ 0.93
MSX2-201ENST00000239243 DRAXINQ8NBI3 349 aaPredicted RBP20.88■□□□□ 0.93
MSX2-201ENST00000239243 CT55Q8WUE5 264 aa20.88■□□□□ 0.93
MSX2-201ENST00000239243 OR8B4Q96RC9 309 aa20.88■□□□□ 0.93
MSX2-201ENST00000239243 KCNK17Q96T54 332 aa20.88■□□□□ 0.93
MSX2-201ENST00000239243 MRPL22Q9NWU5 206 aaKnown RBP20.88■□□□□ 0.93
MSX2-201ENST00000239243 ABRACLQ9P1F3 81 aa20.88■□□□□ 0.93
MSX2-201ENST00000239243 CCBE1Q6UXH8 406 aaPredicted RBP20.87■□□□□ 0.93
MSX2-201ENST00000239243 MAP6Q96JE9 813 aa20.87■□□□□ 0.93
MSX2-201ENST00000239243 CDC6Q99741 560 aa20.87■□□□□ 0.93
MSX2-201ENST00000239243 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.87■□□□□ 0.93
MSX2-201ENST00000239243 FRRS1LQ9P0K9 344 aa20.87■□□□□ 0.93
MSX2-201ENST00000239243 FARSAQ9Y285 508 aaKnown RBP20.87■□□□□ 0.93
MSX2-201ENST00000239243 VPS13AQ96RL7 3174 aa20.87■□□□□ 0.93
MSX2-201ENST00000239243 A0A1W2PPK0 400 aa20.86■□□□□ 0.93
MSX2-201ENST00000239243 TMEM212A6NML5 194 aa20.86■□□□□ 0.93
MSX2-201ENST00000239243 HPP00738 406 aa20.86■□□□□ 0.93
MSX2-201ENST00000239243 SPARCP09486 303 aa20.86■□□□□ 0.93
MSX2-201ENST00000239243 OTX2P32243 289 aa20.86■□□□□ 0.93
MSX2-201ENST00000239243 RPS15P62841 145 aaKnown RBP20.86■□□□□ 0.93
MSX2-201ENST00000239243 ASAH1Q13510 395 aa20.86■□□□□ 0.93
MSX2-201ENST00000239243 CDCP2Q5VXM1 449 aa20.86■□□□□ 0.93
MSX2-201ENST00000239243 ZNF679Q8IYX0 411 aa20.86■□□□□ 0.93
MSX2-201ENST00000239243 HSD17B8Q92506 261 aa20.86■□□□□ 0.93
MSX2-201ENST00000239243 THRSPQ92748 146 aa20.86■□□□□ 0.93
MSX2-201ENST00000239243 SH2D2AQ9NP31 389 aa20.86■□□□□ 0.93
MSX2-201ENST00000239243 NOX4Q9NPH5 578 aa20.86■□□□□ 0.93
MSX2-201ENST00000239243 CYSLTR2Q9NS75 346 aa20.86■□□□□ 0.93
MSX2-201ENST00000239243 ARPC4-TTLL3A0A0A6YYG9 625 aa20.86■□□□□ 0.93
MSX2-201ENST00000239243 SLC2A2P11168 524 aaPredicted RBP20.86■□□□□ 0.93
MSX2-201ENST00000239243 ELK1P19419 428 aa20.86■□□□□ 0.93
MSX2-201ENST00000239243 SRMP19623 302 aa20.86■□□□□ 0.93
MSX2-201ENST00000239243 APEX1P27695 318 aaKnown RBP20.86■□□□□ 0.93
MSX2-201ENST00000239243 RPS27P42677 84 aaKnown RBP20.86■□□□□ 0.93
MSX2-201ENST00000239243 CHAF1BQ13112 559 aa20.86■□□□□ 0.93
MSX2-201ENST00000239243 EIF3IQ13347 325 aaKnown RBP20.86■□□□□ 0.93
MSX2-201ENST00000239243 Q499Y3 187 aa20.86■□□□□ 0.93
MSX2-201ENST00000239243 TMEM164Q5U3C3 297 aa20.86■□□□□ 0.93
MSX2-201ENST00000239243 TRIQKQ629K1 86 aa20.86■□□□□ 0.93
MSX2-201ENST00000239243 ZNF544Q6NX49 715 aa20.86■□□□□ 0.93
MSX2-201ENST00000239243 TIPARPQ7Z3E1 657 aaKnown RBP20.86■□□□□ 0.93
MSX2-201ENST00000239243 HDDC2Q7Z4H3 204 aa20.86■□□□□ 0.93
MSX2-201ENST00000239243 CADM3Q8N126 398 aa20.86■□□□□ 0.93
MSX2-201ENST00000239243 GTPBP8Q8N3Z3 284 aaPredicted RBP20.86■□□□□ 0.93
MSX2-201ENST00000239243 Q8N402 240 aa20.86■□□□□ 0.93
MSX2-201ENST00000239243 OR2G2Q8NGZ5 317 aa20.86■□□□□ 0.93
MSX2-201ENST00000239243 TRMT10AQ8TBZ6 339 aaKnown RBP20.86■□□□□ 0.93
MSX2-201ENST00000239243 SGCZQ96LD1 299 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms