RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 LCN6P62502 163 aa12.06□□□□□ -0.48
SRP54-201ENST00000216774 FZD2Q14332 565 aa12.06□□□□□ -0.48
SRP54-201ENST00000216774 TOMM20Q15388 145 aa12.06□□□□□ -0.48
SRP54-201ENST00000216774 CSRP2Q16527 193 aa12.06□□□□□ -0.48
SRP54-201ENST00000216774 MAMSTRQ6ZN01 415 aa12.06□□□□□ -0.48
SRP54-201ENST00000216774 OTOSQ8NHW6 89 aa12.06□□□□□ -0.48
SRP54-201ENST00000216774 ZDHHC1Q8WTX9 485 aa12.06□□□□□ -0.48
SRP54-201ENST00000216774 WBP1Q96G27 269 aa12.06□□□□□ -0.48
SRP54-201ENST00000216774 GINS4Q9BRT9 223 aa12.06□□□□□ -0.48
SRP54-201ENST00000216774 ADAM19Q9H013 955 aa12.06□□□□□ -0.48
SRP54-201ENST00000216774 C17orf105B2RV13 164 aa12.05□□□□□ -0.48
SRP54-201ENST00000216774 SUSD5O60279 629 aa12.05□□□□□ -0.48
SRP54-201ENST00000216774 B3GALNT1O75752 331 aa12.05□□□□□ -0.48
SRP54-201ENST00000216774 SCO1O75880 301 aa12.05□□□□□ -0.48
SRP54-201ENST00000216774 GABRG2P18507 467 aa12.05□□□□□ -0.48
SRP54-201ENST00000216774 TACR3P29371 465 aa12.05□□□□□ -0.48
SRP54-201ENST00000216774 S100A11P31949 105 aa12.05□□□□□ -0.48
SRP54-201ENST00000216774 PLA2G7Q13093 441 aa12.05□□□□□ -0.48
SRP54-201ENST00000216774 MPPED2Q15777 294 aa12.05□□□□□ -0.48
SRP54-201ENST00000216774 CHMP1BQ7LBR1 199 aa12.05□□□□□ -0.48
SRP54-201ENST00000216774 OR51A4Q8NGJ6 313 aa12.05□□□□□ -0.48
SRP54-201ENST00000216774 OR10AC1Q8NH08 325 aa12.05□□□□□ -0.48
SRP54-201ENST00000216774 ASB17Q8WXJ9 295 aa12.05□□□□□ -0.48
SRP54-201ENST00000216774 TAAR8Q969N4 342 aa12.05□□□□□ -0.48
SRP54-201ENST00000216774 MMABQ96EY8 250 aaPredicted RBP12.05□□□□□ -0.48
SRP54-201ENST00000216774 PBX4Q9BYU1 374 aa12.05□□□□□ -0.48
SRP54-201ENST00000216774 SYT4Q9H2B2 425 aa12.05□□□□□ -0.48
SRP54-201ENST00000216774 GPR27Q9NS67 375 aa12.05□□□□□ -0.48
SRP54-201ENST00000216774 MRTO4Q9UKD2 239 aaKnown RBP12.05□□□□□ -0.48
SRP54-201ENST00000216774 UNC80Q8N2C7 3258 aa12.05□□□□□ -0.48
SRP54-201ENST00000216774 H0YC42 278 aa12.04□□□□□ -0.48
SRP54-201ENST00000216774 CDC40O60508 579 aaKnown RBP eCLIP12.04□□□□□ -0.48
SRP54-201ENST00000216774 ACSM4P0C7M7 580 aa12.04□□□□□ -0.48
SRP54-201ENST00000216774 AKAIN1P0CW23 69 aa12.04□□□□□ -0.48
SRP54-201ENST00000216774 CALCRP30988 508 aa12.04□□□□□ -0.48
SRP54-201ENST00000216774 KIR3DL2P43630 455 aa12.04□□□□□ -0.48
SRP54-201ENST00000216774 CCR5P51681 352 aa12.04□□□□□ -0.48
SRP54-201ENST00000216774 SLC37A1P57057 533 aa12.04□□□□□ -0.48
SRP54-201ENST00000216774 TAGLNQ01995 201 aaKnown RBP12.04□□□□□ -0.48
SRP54-201ENST00000216774 HYAL1Q12794 435 aa12.04□□□□□ -0.48
SRP54-201ENST00000216774 NHLRC1Q6VVB1 395 aa12.04□□□□□ -0.48
SRP54-201ENST00000216774 OR52B4Q8NGK2 314 aa12.04□□□□□ -0.48
SRP54-201ENST00000216774 ZNF563Q8TA94 476 aa12.04□□□□□ -0.48
SRP54-201ENST00000216774 SLC46A1Q96NT5 459 aa12.04□□□□□ -0.48
SRP54-201ENST00000216774 GAS2L1Q99501 681 aaPredicted RBP12.04□□□□□ -0.48
SRP54-201ENST00000216774 LAT2Q9GZY6 243 aa12.04□□□□□ -0.48
SRP54-201ENST00000216774 F5P12259 2224 aa12.04□□□□□ -0.48
SRP54-201ENST00000216774 LOC100289279A0A1B0GTE1 492 aa12.04□□□□□ -0.48
SRP54-201ENST00000216774 MFSD2BA6NFX1 497 aa12.04□□□□□ -0.48
SRP54-201ENST00000216774 FRG2CA6NGY1 282 aa12.04□□□□□ -0.48
SRP54-201ENST00000216774 SLC17A2O00624 439 aa12.04□□□□□ -0.48
SRP54-201ENST00000216774 RP2O75695 350 aa12.04□□□□□ -0.48
SRP54-201ENST00000216774 ZP3P21754 424 aa12.04□□□□□ -0.48
SRP54-201ENST00000216774 POU3F4P49335 361 aa12.04□□□□□ -0.48
SRP54-201ENST00000216774 H2BFSP57053 126 aa12.04□□□□□ -0.48
SRP54-201ENST00000216774 HLXQ14774 488 aaPredicted RBP12.04□□□□□ -0.48
SRP54-201ENST00000216774 RAB11BQ15907 218 aa12.04□□□□□ -0.48
SRP54-201ENST00000216774 WDR38Q5JTN6 314 aa12.04□□□□□ -0.48
SRP54-201ENST00000216774 KRT77Q7Z794 578 aa12.04□□□□□ -0.48
SRP54-201ENST00000216774 NAXDQ8IW45 347 aa12.04□□□□□ -0.48
SRP54-201ENST00000216774 OR51D1Q8NGF3 324 aa12.04□□□□□ -0.48
SRP54-201ENST00000216774 TSEN15Q8WW01 171 aaKnown RBP12.04□□□□□ -0.48
SRP54-201ENST00000216774 OR8B4Q96RC9 309 aa12.04□□□□□ -0.48
SRP54-201ENST00000216774 REG4Q9BYZ8 158 aa12.04□□□□□ -0.48
SRP54-201ENST00000216774 SEMA4CQ9C0C4 833 aa12.04□□□□□ -0.48
SRP54-201ENST00000216774 PIAS3Q9Y6X2 628 aa12.04□□□□□ -0.48
SRP54-201ENST00000216774 B4DGG1 531 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 H0YIG0 161 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 XKRYO14609 159 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 RLN1P04808 185 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 THEGLP0DJG4 465 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 PRSS3P35030 304 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 CAPZBP47756 277 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 CENPAP49450 140 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 BLKP51451 505 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 EFNB2P52799 333 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 C1orf61Q13536 156 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 PARGQ86W56 976 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 PM20D2Q8IYS1 436 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 OR2AK2Q8NG84 335 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 OR5M1Q8NGP8 315 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 OR8K3Q8NH51 312 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 PTPMT1Q8WUK0 201 aaPredicted RBP12.03□□□□□ -0.48
SRP54-201ENST00000216774 FAM3DQ96BQ1 224 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 ZNF524Q96C55 264 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 OR1F2PQ96R84 312 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 MAP3K3Q99759 626 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 ULBP3Q9BZM4 244 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 ALX4Q9H161 411 aaPredicted RBP12.03□□□□□ -0.48
SRP54-201ENST00000216774 NXF5Q9H1B4 397 aaKnown RBP12.03□□□□□ -0.48
SRP54-201ENST00000216774 SDHAF2Q9NX18 166 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 KCNG2Q9UJ96 466 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 PLCL2Q9UPR0 1127 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 F5H5P2 479 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 PRKNO60260 465 aaPredicted RBP12.03□□□□□ -0.48
SRP54-201ENST00000216774 BGLAPP02818 100 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 MELTFP08582 738 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 ITGA5P08648 1049 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 GTF2F2P13984 249 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 PPP3CBP16298 524 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms