RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Crispld2Q8BZQ2 495 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 TbceQ8CIV8 524 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Saysd1Q8K190 188 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Acer2Q8VD53 275 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Slc41a3Q921R8 488 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Zbtb8aQ9CWH1 434 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Etv5Q9CXC9 510 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Gkn3Q9D0T7 191 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 ClpxQ9JHS4 634 aaKnown RBP20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Slc35a2Q9R0M8 390 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Tex264E9Q137 309 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Efna3O08545 230 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Cdk1P11440 297 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Mfap2P55002 183 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 CxadrP97792 365 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Cab39Q06138 341 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Hp1bp3Q3TEA8 554 aaKnown RBP20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Clcn4Q61418 747 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Meig1Q61845 88 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Gpr176Q80WT4 515 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Slc35f1Q8BGK5 408 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Mfsd8Q8BH31 519 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Prkd2Q8BZ03 875 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Sulf2Q8CFG0 875 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Slc27a4Q91VE0 643 aaKnown RBP20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Acy3Q91XE4 318 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 AldobQ91Y97 364 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Polr2hQ923G2 150 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Smurf1Q9CUN6 731 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Nkain4Q9JMG4 208 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Slc37a2Q9WU81 501 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Spta1P08032 2415 aa20.5■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Rpl3lE9PWZ3 407 aa20.5■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Cyp4a31F8WGU9 509 aa20.5■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Vmn2r99H3BK37 856 aa20.5■□□□□ 0.87
Scn1b-201ENSMUST00000098548 P01808 119 aa20.5■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Eci1P42125 289 aaKnown RBP20.5■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Rps7P62082 194 aaKnown RBP20.5■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Rps4xP62702 263 aaKnown RBP20.5■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Gnb5P62881 395 aa20.5■□□□□ 0.87
Scn1b-201ENSMUST00000098548 HbegfQ06186 208 aa20.5■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Pdss2Q33DR3 401 aa20.5■□□□□ 0.87
Scn1b-201ENSMUST00000098548 ElaneQ3UP87 265 aa20.5■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Fam169aQ5XG69 665 aa20.5■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Gdi2Q61598 445 aaKnown RBP20.5■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Olfr290Q7TS13 315 aa20.5■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Txnl4bQ8BUH1 149 aa20.5■□□□□ 0.87
Scn1b-201ENSMUST00000098548 QdprQ8BVI4 241 aa20.5■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Ugt2b37Q8VCN3 530 aa20.5■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Calhm2Q8VEC4 323 aa20.5■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Mgst3Q9CPU4 153 aa20.5■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Abcb8Q9CXJ4 717 aa20.5■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Dnaja4Q9JMC3 397 aa20.5■□□□□ 0.87
Scn1b-201ENSMUST00000098548 PrknQ9WVS6 464 aa20.5■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Trbv2A0A0B4J1G8 114 aa20.49■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Skint10A7TZG1 354 aa20.49■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Bmp8bP55105 399 aa20.49■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Foxr2Q3UM89 302 aa20.49■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Spin1Q61142 262 aa20.49■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Znf511Q6P0X2 227 aa20.49■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Rcor3Q6PGA0 451 aa20.49■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Galnt12Q8BGT9 576 aa20.49■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Acp6Q8BP40 418 aa20.49■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Rad51ap1Q8C551 337 aa20.49■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Tsen15Q8R3W5 168 aa20.49■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Emc4Q9CZX9 183 aa20.49■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Ptp4a3Q9D658 173 aa20.49■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Tnfrsf21Q9EPU5 655 aa20.49■□□□□ 0.87
Scn1b-201ENSMUST00000098548 P2rx4Q9JJX6 388 aa20.49■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Asic5Q9R0Y1 495 aa20.49■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Ahctf1Q8CJF7 2243 aaKnown RBP20.49■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Fbn2Q61555 2907 aa20.48■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Col6a6Q8C6K9 2265 aa20.48■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Olfr1366A0A1W2P740 328 aa20.48■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Kiaa1324A2AFS3 1009 aa20.48■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Rhox2fA2ANE0 191 aa20.48■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Olfr1205A2ATJ7 307 aa20.48■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Olfr619E9PV95 320 aa20.48■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Gm17174M0QWQ9 212 aa20.48■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Hmgn2P09602 90 aa20.48■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Tead3P70210 439 aa20.48■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Treml4Q3LRV9 263 aa20.48■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Slc26a10Q5EBI0 492 aa20.48■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Sidt1Q6AXF6 827 aa20.48■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Cyb561a3Q6P1H1 242 aa20.48■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Slc26a11Q80ZD3 593 aa20.48■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Cxcl16Q8BSU2 246 aa20.48■□□□□ 0.87
Scn1b-201ENSMUST00000098548 C130079G13RikQ8BUY2 280 aa20.48■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Zbtb37Q8C3U9 504 aa20.48■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Olfr985Q8VGB4 311 aa20.48■□□□□ 0.87
Scn1b-201ENSMUST00000098548 MrgprgQ91ZB5 289 aa20.48■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Fastkd2Q922E6 689 aaKnown RBP20.48■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Yif1bQ9CX30 311 aa20.48■□□□□ 0.87
Scn1b-201ENSMUST00000098548 PlgrktQ9D3P8 147 aa20.48■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Tmem25Q9DCF1 365 aa20.48■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Tinf2Q9QXG9 341 aa20.48■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Dgat1Q9Z2A7 498 aa20.48■□□□□ 0.87
Scn1b-201ENSMUST00000098548 FryE9Q8I9 3020 aa20.48■□□□□ 0.87
Scn1b-201ENSMUST00000098548 4930595D18RikD3Z642 64 aa20.47■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Ier3P46694 153 aa20.47■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 63.7 ms