RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Trappc6bQ9D289 158 aa9.45□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Slc22a17Q9D9E0 401 aa9.45□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Slc22a5Q9Z0E8 557 aa9.45□□□□□ -0.9
Ubr1-201ENSMUST00000028728 IqckD3YYL3 290 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Enpp7D3Z6V6 446 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Olfr655E9Q252 308 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 H2-M1F7CXU4 344 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Vmn2r28L7N203 852 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Lin7bO88951 207 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 P01669 111 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 CycsP62897 105 aaKnown RBP9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 NfybP63139 207 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 KhsrpQ3U0V1 748 aaKnown RBP9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Scarb1Q61009 509 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Olfr1167Q7TR26 316 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 BanpQ8VBU8 548 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Asb9Q91ZT8 290 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Cryzl1Q921W4 348 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Bud23Q9CY21 281 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Exosc7Q9D0M0 291 aaKnown RBP9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Cby1Q9D1C2 127 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Olfr948Q9EQ95 321 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Trbc2A0A075B5J4 173 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Trbc1A0A0A6YWV4 173 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Dmrtb1A2A9I7 359 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Esp36G3UZD8 160 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Hoxb5P09079 269 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 InipQ3TXT3 104 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Olfr1133Q7TR44 313 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Wdfy2Q8BUB4 400 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Tsen54Q8C2A2 525 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Q8C4X7 151 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Olfr156Q8VGA9 318 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Olfr558Q8VGZ7 317 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Snx18Q91ZR2 614 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Olfr661Q99NH4 319 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Fam13cQ9DBR2 601 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Plxdc2Q9DC11 530 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 MokQ9WVS4 420 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Auts2A0A087WPF7 1261 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Olfr623E9Q382 317 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Tssk2O54863 358 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Hoxa4P06798 285 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 CfhP06909 1234 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Tppp2Q0P5Y3 170 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Uap1l1Q3TW96 507 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Tsr3Q5HZH2 323 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Olfr323Q5NCD0 323 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Icam5Q60625 917 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Olfr780Q8VEU0 312 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Olfr522Q8VGL1 312 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Plscr2Q9DCW2 307 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Olfr930Q9EQ99 308 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 CitP49025 2055 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Scn4aQ9ER60 1841 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Gm20390E9PZF0 267 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Gpld1O70362 837 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Emc8O70378 207 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Fgf9P54130 208 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Nme2Q01768 152 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 A1bgQ19LI2 512 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Treml2Q2LA85 329 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Hepacam2Q4VAH7 463 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Havcr1Q5QNS5 305 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Olfr11Q60890 313 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Fam205cQ80YD3 371 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Slc5a7Q8BGY9 580 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Rnf208Q8K0W3 265 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 SptssaQ8R207 71 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Pfn4Q9D6I3 129 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Olfr316A0A0N4SVP2 306 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Olfr1432A0A140LHS7 346 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Vmn2r76E9Q3F5 853 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Nkx1-1G3UXB3 402 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Vwa5b2Q3UR50 1248 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Olfr907Q7TRC7 310 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Acaa2Q8BWT1 397 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Ptov1Q91VU8 416 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Rab4bQ91ZR1 213 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 FrkQ922K9 512 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Klhdc8bQ9D2D9 354 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 RangrfQ9JIB0 185 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Dok3Q9QZK7 444 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 NcdnQ9Z0E0 729 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Tjp1P39447 1745 aaKnown RBP9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Gm3854A0A1B0GSS6 495 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Mamdc4A2AJA7 1228 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Zfp345A2AQA1 561 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Morn1A2RTS7 477 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Gm9047B9EJX3 177 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Rpl18P35980 188 aaKnown RBP9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Upp1P52624 311 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 FapP97321 761 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Ifna15Q61718 190 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Defb19Q8K3I8 83 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Utp4Q8R2N2 686 aaKnown RBP9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Olfr1469Q8VFW5 309 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Lnx2Q91XL2 687 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 L3hypdhQ9CXA2 354 aa9.44□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Ly6iQ9WU67 134 aa9.44□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms