RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 HDDC2Q7Z4H3 204 aa17.12■□□□□ 0.33
HLA-A-209ENST00000638375 NOXO1Q8NFA2 376 aa17.12■□□□□ 0.33
HLA-A-209ENST00000638375 MAGEE2Q8TD90 523 aaPredicted RBP17.12■□□□□ 0.33
HLA-A-209ENST00000638375 ZNF566Q969W8 418 aa17.12■□□□□ 0.33
HLA-A-209ENST00000638375 LRR1Q96L50 414 aa17.12■□□□□ 0.33
HLA-A-209ENST00000638375 ERMAPQ96PL5 475 aaPredicted RBP17.12■□□□□ 0.33
HLA-A-209ENST00000638375 KCNK17Q96T54 332 aa17.12■□□□□ 0.33
HLA-A-209ENST00000638375 SLC29A1Q99808 456 aa17.12■□□□□ 0.33
HLA-A-209ENST00000638375 RBM4BQ9BQ04 359 aaKnown RBP17.12■□□□□ 0.33
HLA-A-209ENST00000638375 C9orf16Q9BUW7 83 aa17.12■□□□□ 0.33
HLA-A-209ENST00000638375 RBM4Q9BWF3 364 aaKnown RBP17.12■□□□□ 0.33
HLA-A-209ENST00000638375 USE1Q9NZ43 259 aa17.12■□□□□ 0.33
HLA-A-209ENST00000638375 GRHPRQ9UBQ7 328 aa17.12■□□□□ 0.33
HLA-A-209ENST00000638375 UPB1Q9UBR1 384 aa17.12■□□□□ 0.33
HLA-A-209ENST00000638375 RRP15Q9Y3B9 282 aaKnown RBP17.12■□□□□ 0.33
HLA-A-209ENST00000638375 DOPEY1Q5JWR5 2465 aa17.12■□□□□ 0.33
HLA-A-209ENST00000638375 OR6C65A6NJZ3 312 aa17.11■□□□□ 0.33
HLA-A-209ENST00000638375 H7C1C5 153 aa17.11■□□□□ 0.33
HLA-A-209ENST00000638375 M0R3G1 203 aa17.11■□□□□ 0.33
HLA-A-209ENST00000638375 IMPA2O14732 288 aa17.11■□□□□ 0.33
HLA-A-209ENST00000638375 ALPLP05186 524 aa17.11■□□□□ 0.33
HLA-A-209ENST00000638375 IGHV1-2P23083 117 aa17.11■□□□□ 0.33
HLA-A-209ENST00000638375 IGFBP5P24593 272 aa17.11■□□□□ 0.33
HLA-A-209ENST00000638375 POU1F1P28069 291 aa17.11■□□□□ 0.33
HLA-A-209ENST00000638375 CD79BP40259 229 aa17.11■□□□□ 0.33
HLA-A-209ENST00000638375 LCN6P62502 163 aa17.11■□□□□ 0.33
HLA-A-209ENST00000638375 FAM27E3Q08E93 113 aa17.11■□□□□ 0.33
HLA-A-209ENST00000638375 KRR1Q13601 381 aaKnown RBP17.11■□□□□ 0.33
HLA-A-209ENST00000638375 TRIP10Q15642 601 aa17.11■□□□□ 0.33
HLA-A-209ENST00000638375 GPR137CQ8N3F9 429 aa17.11■□□□□ 0.33
HLA-A-209ENST00000638375 IQCF1Q8N6M8 205 aa17.11■□□□□ 0.33
HLA-A-209ENST00000638375 SYT14Q8NB59 555 aa17.11■□□□□ 0.33
HLA-A-209ENST00000638375 OR6N1Q8NGY5 312 aa17.11■□□□□ 0.33
HLA-A-209ENST00000638375 TEX47Q8TBZ9 253 aa17.11■□□□□ 0.33
HLA-A-209ENST00000638375 RNASE6Q93091 150 aaKnown RBP17.11■□□□□ 0.33
HLA-A-209ENST00000638375 EME1Q96AY2 570 aa17.11■□□□□ 0.33
HLA-A-209ENST00000638375 RNPEPL1Q9HAU8 725 aa17.11■□□□□ 0.33
HLA-A-209ENST00000638375 NPDC1Q9NQX5 325 aaPredicted RBP17.11■□□□□ 0.33
HLA-A-209ENST00000638375 ASB6Q9NWX5 421 aa17.11■□□□□ 0.33
HLA-A-209ENST00000638375 GLTPQ9NZD2 209 aa17.11■□□□□ 0.33
HLA-A-209ENST00000638375 A6NIZ1 184 aa17.1■□□□□ 0.33
HLA-A-209ENST00000638375 CENPBD1B2RD01 187 aa17.1■□□□□ 0.33
HLA-A-209ENST00000638375 C19orf84I3L1E1 186 aa17.1■□□□□ 0.33
HLA-A-209ENST00000638375 MGRN1O60291 552 aa17.1■□□□□ 0.33
HLA-A-209ENST00000638375 ITGA5P08648 1049 aa17.1■□□□□ 0.33
HLA-A-209ENST00000638375 COX5AP20674 150 aa17.1■□□□□ 0.33
HLA-A-209ENST00000638375 PEX2P28328 305 aa17.1■□□□□ 0.33
HLA-A-209ENST00000638375 CCKARP32238 428 aa17.1■□□□□ 0.33
HLA-A-209ENST00000638375 ALDH3A2P51648 485 aa17.1■□□□□ 0.33
HLA-A-209ENST00000638375 CRISP1P54107 249 aa17.1■□□□□ 0.33
HLA-A-209ENST00000638375 CLRN1P58418 232 aa17.1■□□□□ 0.33
HLA-A-209ENST00000638375 RAP1BP61224 184 aa17.1■□□□□ 0.33
HLA-A-209ENST00000638375 RAP1AP62834 184 aa17.1■□□□□ 0.33
HLA-A-209ENST00000638375 HIST3H3Q16695 136 aa17.1■□□□□ 0.33
HLA-A-209ENST00000638375 PGGHGQ32M88 737 aa17.1■□□□□ 0.33
HLA-A-209ENST00000638375 LPCAT4Q643R3 524 aa17.1■□□□□ 0.33
HLA-A-209ENST00000638375 STAC2Q6ZMT1 411 aa17.1■□□□□ 0.33
HLA-A-209ENST00000638375 ZBTB49Q6ZSB9 765 aa17.1■□□□□ 0.33
HLA-A-209ENST00000638375 PTCHD4Q6ZW05 846 aa17.1■□□□□ 0.33
HLA-A-209ENST00000638375 CXorf67Q86X51 503 aaPredicted RBP17.1■□□□□ 0.33
HLA-A-209ENST00000638375 LNX2Q8N448 690 aa17.1■□□□□ 0.33
HLA-A-209ENST00000638375 OR2T33Q8NG76 320 aa17.1■□□□□ 0.33
HLA-A-209ENST00000638375 NMD3Q96D46 503 aaKnown RBP17.1■□□□□ 0.33
HLA-A-209ENST00000638375 ZNF837Q96EG3 531 aaPredicted RBP17.1■□□□□ 0.33
HLA-A-209ENST00000638375 ALG12Q9BV10 488 aa17.1■□□□□ 0.33
HLA-A-209ENST00000638375 GPR35Q9HC97 309 aa17.1■□□□□ 0.33
HLA-A-209ENST00000638375 ELOVL5Q9NYP7 299 aa17.1■□□□□ 0.33
HLA-A-209ENST00000638375 ZNF587BE7ETH6 402 aa17.09■□□□□ 0.33
HLA-A-209ENST00000638375 RPL36A-HNRNPH2H7BZ11 118 aa17.09■□□□□ 0.33
HLA-A-209ENST00000638375 CASQ2O14958 399 aaPredicted RBP17.09■□□□□ 0.33
HLA-A-209ENST00000638375 ARHGEF9O43307 516 aa17.09■□□□□ 0.33
HLA-A-209ENST00000638375 IDH3BO43837 385 aa17.09■□□□□ 0.33
HLA-A-209ENST00000638375 KRT33AO76009 404 aa17.09■□□□□ 0.33
HLA-A-209ENST00000638375 CLDN1O95832 211 aa17.09■□□□□ 0.33
HLA-A-209ENST00000638375 HIST1H1CP16403 213 aaKnown RBP17.09■□□□□ 0.33
HLA-A-209ENST00000638375 EPHA2P29317 976 aa17.09■□□□□ 0.33
HLA-A-209ENST00000638375 CDKN2AP42771 156 aaKnown RBP17.09■□□□□ 0.33
HLA-A-209ENST00000638375 ESRRGP62508 458 aa17.09■□□□□ 0.33
HLA-A-209ENST00000638375 MYBPC1Q00872 1141 aa17.09■□□□□ 0.33
HLA-A-209ENST00000638375 ROR2Q01974 943 aaKnown RBP17.09■□□□□ 0.33
HLA-A-209ENST00000638375 GINS1Q14691 196 aa17.09■□□□□ 0.33
HLA-A-209ENST00000638375 P2RY6Q15077 328 aa17.09■□□□□ 0.33
HLA-A-209ENST00000638375 TSC22D1Q15714 1073 aa17.09■□□□□ 0.33
HLA-A-209ENST00000638375 SLC35F1Q5T1Q4 408 aa17.09■□□□□ 0.33
HLA-A-209ENST00000638375 C9orf135Q5VTT2 229 aa17.09■□□□□ 0.33
HLA-A-209ENST00000638375 LRFN4Q6PJG9 635 aa17.09■□□□□ 0.33
HLA-A-209ENST00000638375 ZNF433Q8N7K0 673 aaPredicted RBP17.09■□□□□ 0.33
HLA-A-209ENST00000638375 MCHR2Q969V1 340 aa17.09■□□□□ 0.33
HLA-A-209ENST00000638375 ULBP2Q9BZM5 246 aa17.09■□□□□ 0.33
HLA-A-209ENST00000638375 CRLF2Q9HC73 371 aa17.09■□□□□ 0.33
HLA-A-209ENST00000638375 BAIAP2Q9UQB8 552 aa17.09■□□□□ 0.33
HLA-A-209ENST00000638375 CACNA1CQ13936 2221 aa17.09■□□□□ 0.33
HLA-A-209ENST00000638375 TENM4Q6N022 2769 aa17.09■□□□□ 0.33
HLA-A-209ENST00000638375 FASNP49327 2511 aaKnown RBP17.08■□□□□ 0.33
HLA-A-209ENST00000638375 IGKV1D-43A0A0B4J1Z2 117 aa17.08■□□□□ 0.32
HLA-A-209ENST00000638375 PRSS37A4D1T9 235 aa17.08■□□□□ 0.32
HLA-A-209ENST00000638375 XKRYO14609 159 aa17.08■□□□□ 0.32
HLA-A-209ENST00000638375 LYZL6O75951 148 aa17.08■□□□□ 0.32
HLA-A-209ENST00000638375 PSMB1P20618 241 aaKnown RBP17.08■□□□□ 0.32
HLA-A-209ENST00000638375 MPGP29372 298 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms