RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 GSG1Q2KHT4 349 aa18.59■□□□□ 0.57
PPP4R1-228ENST00000584074 LRFN4Q6PJG9 635 aa18.59■□□□□ 0.57
PPP4R1-228ENST00000584074 SPATA21Q7Z572 469 aa18.59■□□□□ 0.57
PPP4R1-228ENST00000584074 VTCN1Q7Z7D3 282 aa18.59■□□□□ 0.57
PPP4R1-228ENST00000584074 NUP37Q8NFH4 326 aa18.59■□□□□ 0.57
PPP4R1-228ENST00000584074 SGTBQ96EQ0 304 aa18.59■□□□□ 0.57
PPP4R1-228ENST00000584074 MS4A3Q96HJ5 214 aa18.59■□□□□ 0.57
PPP4R1-228ENST00000584074 ELAC2Q9BQ52 826 aaKnown RBP18.59■□□□□ 0.57
PPP4R1-228ENST00000584074 EFCAB1Q9HAE3 211 aa18.59■□□□□ 0.57
PPP4R1-228ENST00000584074 A4GNTQ9UNA3 340 aa18.59■□□□□ 0.57
PPP4R1-228ENST00000584074 HEATR1Q9H583 2144 aaKnown RBP18.59■□□□□ 0.57
PPP4R1-228ENST00000584074 BCL10O95999 233 aa18.58■□□□□ 0.56
PPP4R1-228ENST00000584074 F13BP05160 661 aa18.58■□□□□ 0.56
PPP4R1-228ENST00000584074 PGA4P0DJD7 388 aa18.58■□□□□ 0.56
PPP4R1-228ENST00000584074 PGA3P0DJD8 388 aa18.58■□□□□ 0.56
PPP4R1-228ENST00000584074 THRBP10828 461 aa18.58■□□□□ 0.56
PPP4R1-228ENST00000584074 FUT4P22083 530 aa18.58■□□□□ 0.56
PPP4R1-228ENST00000584074 THBS4P35443 961 aa18.58■□□□□ 0.56
PPP4R1-228ENST00000584074 AQP2P41181 271 aa18.58■□□□□ 0.56
PPP4R1-228ENST00000584074 DSCR9P59020 149 aa18.58■□□□□ 0.56
PPP4R1-228ENST00000584074 RUNX1T1Q06455 604 aa18.58■□□□□ 0.56
PPP4R1-228ENST00000584074 C8orf82Q6P1X6 216 aaPredicted RBP18.58■□□□□ 0.56
PPP4R1-228ENST00000584074 LZICQ8WZA0 190 aa18.58■□□□□ 0.56
PPP4R1-228ENST00000584074 HOPXQ9BPY8 73 aaPredicted RBP18.58■□□□□ 0.56
PPP4R1-228ENST00000584074 MED31Q9Y3C7 131 aa18.58■□□□□ 0.56
PPP4R1-228ENST00000584074 SNX13Q9Y5W8 968 aa18.58■□□□□ 0.56
PPP4R1-228ENST00000584074 ALPK2Q86TB3 2170 aa18.57■□□□□ 0.56
PPP4R1-228ENST00000584074 B9A039 149 aa18.57■□□□□ 0.56
PPP4R1-228ENST00000584074 CXCR6O00574 342 aa18.57■□□□□ 0.56
PPP4R1-228ENST00000584074 PIP5K1CO60331 668 aa18.57■□□□□ 0.56
PPP4R1-228ENST00000584074 F12P00748 615 aaPredicted RBP18.57■□□□□ 0.56
PPP4R1-228ENST00000584074 IGF2P01344 180 aa18.57■□□□□ 0.56
PPP4R1-228ENST00000584074 PATE4P0C8F1 98 aa18.57■□□□□ 0.56
PPP4R1-228ENST00000584074 YAP1P46937 504 aaKnown RBP18.57■□□□□ 0.56
PPP4R1-228ENST00000584074 GIPRP48546 466 aa18.57■□□□□ 0.56
PPP4R1-228ENST00000584074 GSK3BP49841 420 aa18.57■□□□□ 0.56
PPP4R1-228ENST00000584074 LSM11P83369 360 aaKnown RBP eCLIP18.57■□□□□ 0.56
PPP4R1-228ENST00000584074 PPP2R2BQ00005 443 aa18.57■□□□□ 0.56
PPP4R1-228ENST00000584074 EFNB3Q15768 340 aa18.57■□□□□ 0.56
PPP4R1-228ENST00000584074 SKA3Q8IX90 412 aa18.57■□□□□ 0.56
PPP4R1-228ENST00000584074 IL17RDQ8NFM7 739 aa18.57■□□□□ 0.56
PPP4R1-228ENST00000584074 MOSPD2Q8NHP6 518 aa18.57■□□□□ 0.56
PPP4R1-228ENST00000584074 NANOS1Q8WY41 292 aaKnown RBP18.57■□□□□ 0.56
PPP4R1-228ENST00000584074 PRRC1Q96M27 445 aa18.57■□□□□ 0.56
PPP4R1-228ENST00000584074 ZNF75AQ96N20 296 aa18.57■□□□□ 0.56
PPP4R1-228ENST00000584074 SORCS2Q96PQ0 1159 aa18.57■□□□□ 0.56
PPP4R1-228ENST00000584074 ZNF442Q9H7R0 627 aa18.57■□□□□ 0.56
PPP4R1-228ENST00000584074 A0A096LNT2 108 aa18.56■□□□□ 0.56
PPP4R1-228ENST00000584074 A0A1W2PRG6 482 aa18.56■□□□□ 0.56
PPP4R1-228ENST00000584074 GSTA4O15217 222 aa18.56■□□□□ 0.56
PPP4R1-228ENST00000584074 GPRIN2O60269 458 aa18.56■□□□□ 0.56
PPP4R1-228ENST00000584074 PDE5AO76074 875 aa18.56■□□□□ 0.56
PPP4R1-228ENST00000584074 ZNF682O95780 498 aa18.56■□□□□ 0.56
PPP4R1-228ENST00000584074 QDPRP09417 244 aa18.56■□□□□ 0.56
PPP4R1-228ENST00000584074 ZNF14P17017 642 aaPredicted RBP18.56■□□□□ 0.56
PPP4R1-228ENST00000584074 PTDSS1P48651 473 aaKnown RBP18.56■□□□□ 0.56
PPP4R1-228ENST00000584074 NUDT2P50583 147 aa18.56■□□□□ 0.56
PPP4R1-228ENST00000584074 RAB1AP62820 205 aa18.56■□□□□ 0.56
PPP4R1-228ENST00000584074 KRT80Q6KB66 452 aa18.56■□□□□ 0.56
PPP4R1-228ENST00000584074 PIWIL3Q7Z3Z3 882 aaKnown RBP18.56■□□□□ 0.56
PPP4R1-228ENST00000584074 SLC22A24Q8N4F4 322 aa18.56■□□□□ 0.56
PPP4R1-228ENST00000584074 ANKS4BQ8N8V4 417 aa18.56■□□□□ 0.56
PPP4R1-228ENST00000584074 FGFBP3Q8TAT2 258 aa18.56■□□□□ 0.56
PPP4R1-228ENST00000584074 LIPHQ8WWY8 451 aa18.56■□□□□ 0.56
PPP4R1-228ENST00000584074 FAM168AQ92567 244 aa18.56■□□□□ 0.56
PPP4R1-228ENST00000584074 VRK1Q99986 396 aaPredicted RBP18.56■□□□□ 0.56
PPP4R1-228ENST00000584074 FAM107BQ9H098 131 aa18.56■□□□□ 0.56
PPP4R1-228ENST00000584074 MYLK2Q9H1R3 596 aa18.56■□□□□ 0.56
PPP4R1-228ENST00000584074 PLK3Q9H4B4 646 aa18.56■□□□□ 0.56
PPP4R1-228ENST00000584074 RHCGQ9UBD6 479 aa18.56■□□□□ 0.56
PPP4R1-228ENST00000584074 HIVEP2P31629 2446 aa18.55■□□□□ 0.56
PPP4R1-228ENST00000584074 ANK3Q12955 4377 aaKnown RBP18.55■□□□□ 0.56
PPP4R1-228ENST00000584074 J3KTA2 159 aa18.55■□□□□ 0.56
PPP4R1-228ENST00000584074 DHHO43323 396 aa18.55■□□□□ 0.56
PPP4R1-228ENST00000584074 IGHG1P01857 330 aa18.55■□□□□ 0.56
PPP4R1-228ENST00000584074 NPR2P20594 1047 aa18.55■□□□□ 0.56
PPP4R1-228ENST00000584074 CLRN1P58418 232 aa18.55■□□□□ 0.56
PPP4R1-228ENST00000584074 ST3GAL3Q11203 375 aa18.55■□□□□ 0.56
PPP4R1-228ENST00000584074 SNTB2Q13425 540 aaKnown RBP18.55■□□□□ 0.56
PPP4R1-228ENST00000584074 DAG1Q14118 895 aa18.55■□□□□ 0.56
PPP4R1-228ENST00000584074 LAPTM4AQ15012 233 aa18.55■□□□□ 0.56
PPP4R1-228ENST00000584074 HACD2Q6Y1H2 254 aa18.55■□□□□ 0.56
PPP4R1-228ENST00000584074 SYT14Q8NB59 555 aa18.55■□□□□ 0.56
PPP4R1-228ENST00000584074 C10orf105Q8TEF2 133 aa18.55■□□□□ 0.56
PPP4R1-228ENST00000584074 ASB10Q8WXI3 467 aa18.55■□□□□ 0.56
PPP4R1-228ENST00000584074 ZNF347Q96SE7 839 aa18.55■□□□□ 0.56
PPP4R1-228ENST00000584074 SH3GL3Q99963 347 aa18.55■□□□□ 0.56
PPP4R1-228ENST00000584074 MRPL13Q9BYD1 178 aaKnown RBP18.55■□□□□ 0.56
PPP4R1-228ENST00000584074 INIPQ9NRY2 104 aa18.55■□□□□ 0.56
PPP4R1-228ENST00000584074 TMEM38BQ9NVV0 291 aa18.55■□□□□ 0.56
PPP4R1-228ENST00000584074 MCIDASD6RGH6 385 aa18.54■□□□□ 0.56
PPP4R1-228ENST00000584074 hCG_2039718K7EN88 272 aa18.54■□□□□ 0.56
PPP4R1-228ENST00000584074 FFAR1O14842 300 aa18.54■□□□□ 0.56
PPP4R1-228ENST00000584074 UBL3O95164 117 aa18.54■□□□□ 0.56
PPP4R1-228ENST00000584074 RAB36O95755 333 aa18.54■□□□□ 0.56
PPP4R1-228ENST00000584074 TP53P04637 393 aaPredicted RBP18.54■□□□□ 0.56
PPP4R1-228ENST00000584074 IFNW1P05000 195 aa18.54■□□□□ 0.56
PPP4R1-228ENST00000584074 TSPAN19P0C672 248 aa18.54■□□□□ 0.56
PPP4R1-228ENST00000584074 OR8G3PP0DMU2 310 aa18.54■□□□□ 0.56
PPP4R1-228ENST00000584074 NR4A1P22736 598 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms