RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 RXFP3Q9NSD7 469 aa12.54□□□□□ -0.4
RNF43-202ENST00000577625 RPS6KB2Q9UBS0 482 aa12.54□□□□□ -0.4
RNF43-202ENST00000577625 FAM74A7A6NL05 159 aa12.54□□□□□ -0.4
RNF43-202ENST00000577625 SCDO00767 359 aa12.54□□□□□ -0.4
RNF43-202ENST00000577625 CASKO14936 926 aa12.54□□□□□ -0.4
RNF43-202ENST00000577625 RCBTB2O95199 551 aa12.54□□□□□ -0.4
RNF43-202ENST00000577625 APOC3P02656 99 aa12.54□□□□□ -0.4
RNF43-202ENST00000577625 FABP1P07148 127 aa12.54□□□□□ -0.4
RNF43-202ENST00000577625 PEPDP12955 493 aa12.54□□□□□ -0.4
RNF43-202ENST00000577625 CCL4P13236 92 aa12.54□□□□□ -0.4
RNF43-202ENST00000577625 ZNF28P17035 718 aa12.54□□□□□ -0.4
RNF43-202ENST00000577625 TBXA2RP21731 343 aa12.54□□□□□ -0.4
RNF43-202ENST00000577625 BTCP35070 178 aa12.54□□□□□ -0.4
RNF43-202ENST00000577625 RPS7P62081 194 aaKnown RBP12.54□□□□□ -0.4
RNF43-202ENST00000577625 NTRK2Q16620 822 aa12.54□□□□□ -0.4
RNF43-202ENST00000577625 TMEM44Q2T9K0 475 aa12.54□□□□□ -0.4
RNF43-202ENST00000577625 FAM74A3Q4VXF1 159 aa12.54□□□□□ -0.4
RNF43-202ENST00000577625 GATSQ8NAP1 163 aa12.54□□□□□ -0.4
RNF43-202ENST00000577625 NFAM1Q8NET5 270 aaPredicted RBP12.54□□□□□ -0.4
RNF43-202ENST00000577625 OR52L1Q8NGH7 329 aa12.54□□□□□ -0.4
RNF43-202ENST00000577625 OR2T35Q8NGX2 323 aa12.54□□□□□ -0.4
RNF43-202ENST00000577625 RFT1Q96AA3 541 aa12.54□□□□□ -0.4
RNF43-202ENST00000577625 SEMA4CQ9C0C4 833 aa12.54□□□□□ -0.4
RNF43-202ENST00000577625 AKIRIN1Q9H9L7 192 aaPredicted RBP12.54□□□□□ -0.4
RNF43-202ENST00000577625 EXOSC3Q9NQT5 275 aaKnown RBP12.54□□□□□ -0.4
RNF43-202ENST00000577625 ING1Q9UK53 422 aaPredicted RBP12.54□□□□□ -0.4
RNF43-202ENST00000577625 FBXL2Q9UKC9 423 aa12.54□□□□□ -0.4
RNF43-202ENST00000577625 SPATA2Q9UM82 520 aa12.54□□□□□ -0.4
RNF43-202ENST00000577625 SIGLEC7Q9Y286 467 aa12.54□□□□□ -0.4
RNF43-202ENST00000577625 GPR52Q9Y2T5 361 aa12.54□□□□□ -0.4
RNF43-202ENST00000577625 OIP5O43482 229 aa12.53□□□□□ -0.4
RNF43-202ENST00000577625 TSPAN2O60636 221 aa12.53□□□□□ -0.4
RNF43-202ENST00000577625 ICOSLGO75144 302 aa12.53□□□□□ -0.4
RNF43-202ENST00000577625 REM1O75628 298 aa12.53□□□□□ -0.4
RNF43-202ENST00000577625 CH25HO95992 272 aa12.53□□□□□ -0.4
RNF43-202ENST00000577625 NGFRP08138 427 aa12.53□□□□□ -0.4
RNF43-202ENST00000577625 SAGP10523 405 aaPredicted RBP12.53□□□□□ -0.4
RNF43-202ENST00000577625 BMP7P18075 431 aa12.53□□□□□ -0.4
RNF43-202ENST00000577625 FUT1P19526 365 aa12.53□□□□□ -0.4
RNF43-202ENST00000577625 CALCRP30988 508 aa12.53□□□□□ -0.4
RNF43-202ENST00000577625 FGF9P31371 208 aaPredicted RBP12.53□□□□□ -0.4
RNF43-202ENST00000577625 CAV3P56539 151 aa12.53□□□□□ -0.4
RNF43-202ENST00000577625 SSTP61278 116 aa12.53□□□□□ -0.4
RNF43-202ENST00000577625 SKP2Q13309 424 aa12.53□□□□□ -0.4
RNF43-202ENST00000577625 APCDD1LQ8NCL9 501 aa12.53□□□□□ -0.4
RNF43-202ENST00000577625 C17orf47Q8NEP4 570 aa12.53□□□□□ -0.4
RNF43-202ENST00000577625 MOSPD2Q8NHP6 518 aa12.53□□□□□ -0.4
RNF43-202ENST00000577625 C1GALT1C1Q96EU7 318 aa12.53□□□□□ -0.4
RNF43-202ENST00000577625 BABAM2Q9NXR7 383 aa12.53□□□□□ -0.4
RNF43-202ENST00000577625 IL20RAQ9UHF4 553 aa12.53□□□□□ -0.4
RNF43-202ENST00000577625 A0A087WUJ7 227 aa12.53□□□□□ -0.4
RNF43-202ENST00000577625 IRGMA1A4Y4 181 aa12.53□□□□□ -0.4
RNF43-202ENST00000577625 G3V3Q6 166 aa12.53□□□□□ -0.4
RNF43-202ENST00000577625 BHLHE40O14503 412 aa12.53□□□□□ -0.4
RNF43-202ENST00000577625 TCRBP04435 133 aa12.53□□□□□ -0.4
RNF43-202ENST00000577625 IFNA4P05014 189 aa12.53□□□□□ -0.4
RNF43-202ENST00000577625 BTF3P20290 206 aaKnown RBP12.53□□□□□ -0.4
RNF43-202ENST00000577625 GAS1P54826 345 aa12.53□□□□□ -0.4
RNF43-202ENST00000577625 EMP2P54851 167 aa12.53□□□□□ -0.4
RNF43-202ENST00000577625 RAG2P55895 527 aa12.53□□□□□ -0.4
RNF43-202ENST00000577625 TSPAN5P62079 268 aa12.53□□□□□ -0.4
RNF43-202ENST00000577625 MC2RQ01718 297 aa12.53□□□□□ -0.4
RNF43-202ENST00000577625 DHODHQ02127 395 aa12.53□□□□□ -0.4
RNF43-202ENST00000577625 PLCXD2Q0VAA5 305 aa12.53□□□□□ -0.4
RNF43-202ENST00000577625 RAB40BQ12829 278 aa12.53□□□□□ -0.4
RNF43-202ENST00000577625 CRTC2Q53ET0 693 aaPredicted RBP12.53□□□□□ -0.4
RNF43-202ENST00000577625 AADACL4Q5VUY2 407 aa12.53□□□□□ -0.4
RNF43-202ENST00000577625 HACD4Q5VWC8 232 aa12.53□□□□□ -0.4
RNF43-202ENST00000577625 MRPL14Q6P1L8 145 aaKnown RBP12.53□□□□□ -0.4
RNF43-202ENST00000577625 ASB18Q6ZVZ8 466 aa12.53□□□□□ -0.4
RNF43-202ENST00000577625 LNX2Q8N448 690 aa12.53□□□□□ -0.4
RNF43-202ENST00000577625 SYT14Q8NB59 555 aa12.53□□□□□ -0.4
RNF43-202ENST00000577625 OR52I1Q8NGK6 324 aa12.53□□□□□ -0.4
RNF43-202ENST00000577625 OR13C2Q8NGS9 318 aa12.53□□□□□ -0.4
RNF43-202ENST00000577625 PHOSPHO1Q8TCT1 267 aa12.53□□□□□ -0.4
RNF43-202ENST00000577625 SCARB1Q8WTV0 552 aa12.53□□□□□ -0.4
RNF43-202ENST00000577625 CCNL2Q96S94 520 aaPredicted RBP12.53□□□□□ -0.4
RNF43-202ENST00000577625 WDR77Q9BQA1 342 aaPredicted RBP12.53□□□□□ -0.4
RNF43-202ENST00000577625 THAP7Q9BT49 309 aaPredicted RBP12.53□□□□□ -0.4
RNF43-202ENST00000577625 RERGLQ9H628 205 aa12.53□□□□□ -0.4
RNF43-202ENST00000577625 DCAF16Q9NXF7 216 aa12.53□□□□□ -0.4
RNF43-202ENST00000577625 ZNF264O43296 627 aa12.52□□□□□ -0.4
RNF43-202ENST00000577625 RAB36O95755 333 aa12.52□□□□□ -0.4
RNF43-202ENST00000577625 ECDO95905 644 aaPredicted RBP12.52□□□□□ -0.4
RNF43-202ENST00000577625 GLAP06280 429 aa12.52□□□□□ -0.4
RNF43-202ENST00000577625 ABCD3P28288 659 aa12.52□□□□□ -0.4
RNF43-202ENST00000577625 IL12BP29460 328 aa12.52□□□□□ -0.4
RNF43-202ENST00000577625 GDI2P50395 445 aaKnown RBP12.52□□□□□ -0.4
RNF43-202ENST00000577625 RPS25P62851 125 aaKnown RBP12.52□□□□□ -0.4
RNF43-202ENST00000577625 RNF4P78317 190 aa12.52□□□□□ -0.4
RNF43-202ENST00000577625 SMARCD3Q6STE5 483 aa12.52□□□□□ -0.4
RNF43-202ENST00000577625 TMEM91Q6ZNR0 172 aa12.52□□□□□ -0.4
RNF43-202ENST00000577625 RAB11FIP2Q7L804 512 aa12.52□□□□□ -0.4
RNF43-202ENST00000577625 METTL21AQ8WXB1 218 aa12.52□□□□□ -0.4
RNF43-202ENST00000577625 ADAMTS14Q8WXS8 1223 aa12.52□□□□□ -0.4
RNF43-202ENST00000577625 RFKQ969G6 155 aa12.52□□□□□ -0.4
RNF43-202ENST00000577625 C3orf49Q96BT1 292 aa12.52□□□□□ -0.4
RNF43-202ENST00000577625 LRRC46Q96FV0 321 aa12.52□□□□□ -0.4
RNF43-202ENST00000577625 UBL7Q96S82 380 aaPredicted RBP12.52□□□□□ -0.4
RNF43-202ENST00000577625 CRB3Q9BUF7 120 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms