RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 ZNF813Q6ZN06 617 aa20.5■□□□□ 0.87
SNF8-217ENST00000576353 RINLQ6ZS11 566 aa20.5■□□□□ 0.87
SNF8-217ENST00000576353 TMPRSS11FQ6ZWK6 438 aa20.5■□□□□ 0.87
SNF8-217ENST00000576353 SLC7A13Q8TCU3 470 aa20.5■□□□□ 0.87
SNF8-217ENST00000576353 ACTR3BQ9P1U1 418 aa20.5■□□□□ 0.87
SNF8-217ENST00000576353 CRNNQ9UBG3 495 aaPredicted RBP20.5■□□□□ 0.87
SNF8-217ENST00000576353 TMEM5Q9Y2B1 443 aa20.5■□□□□ 0.87
SNF8-217ENST00000576353 PRRC2AP48634 2157 aaKnown RBP20.49■□□□□ 0.87
SNF8-217ENST00000576353 ENTPD5O75356 428 aa20.49■□□□□ 0.87
SNF8-217ENST00000576353 SEMG1P04279 462 aa20.49■□□□□ 0.87
SNF8-217ENST00000576353 ARR3P36575 388 aa20.49■□□□□ 0.87
SNF8-217ENST00000576353 CAPZA2P47755 286 aa20.49■□□□□ 0.87
SNF8-217ENST00000576353 TUBA1BP68363 451 aa20.49■□□□□ 0.87
SNF8-217ENST00000576353 TUBA4AP68366 448 aa20.49■□□□□ 0.87
SNF8-217ENST00000576353 SPOCK1Q08629 439 aa20.49■□□□□ 0.87
SNF8-217ENST00000576353 FGD3Q5JSP0 725 aa20.49■□□□□ 0.87
SNF8-217ENST00000576353 SHEQ5VZ18 495 aa20.49■□□□□ 0.87
SNF8-217ENST00000576353 PODNL1Q6PEZ8 512 aa20.49■□□□□ 0.87
SNF8-217ENST00000576353 TUBA1AQ71U36 451 aa20.49■□□□□ 0.87
SNF8-217ENST00000576353 TRPM8Q7Z2W7 1104 aa20.49■□□□□ 0.87
SNF8-217ENST00000576353 TGIF2LYQ8IUE0 185 aa20.49■□□□□ 0.87
SNF8-217ENST00000576353 OR51A7Q8NH64 312 aa20.49■□□□□ 0.87
SNF8-217ENST00000576353 ASB10Q8WXI3 467 aa20.49■□□□□ 0.87
SNF8-217ENST00000576353 FOXB1Q99853 325 aa20.49■□□□□ 0.87
SNF8-217ENST00000576353 KCNS3Q9BQ31 491 aa20.49■□□□□ 0.87
SNF8-217ENST00000576353 MRPL13Q9BYD1 178 aaKnown RBP20.49■□□□□ 0.87
SNF8-217ENST00000576353 GSX2Q9BZM3 304 aa20.49■□□□□ 0.87
SNF8-217ENST00000576353 C1orf21Q9H246 121 aa20.49■□□□□ 0.87
SNF8-217ENST00000576353 TXNIPQ9H3M7 391 aa20.49■□□□□ 0.87
SNF8-217ENST00000576353 MUC13Q9H3R2 512 aa20.49■□□□□ 0.87
SNF8-217ENST00000576353 PRPF19Q9UMS4 504 aaKnown RBP20.49■□□□□ 0.87
SNF8-217ENST00000576353 ALPK2Q86TB3 2170 aa20.49■□□□□ 0.87
SNF8-217ENST00000576353 CADP27708 2225 aa20.49■□□□□ 0.87
SNF8-217ENST00000576353 IGHV1-18A0A0C4DH31 117 aa20.48■□□□□ 0.87
SNF8-217ENST00000576353 SEC14L2O76054 403 aa20.48■□□□□ 0.87
SNF8-217ENST00000576353 DIRAS1O95057 198 aa20.48■□□□□ 0.87
SNF8-217ENST00000576353 SOD3P08294 240 aa20.48■□□□□ 0.87
SNF8-217ENST00000576353 PAX1P15863 534 aa20.48■□□□□ 0.87
SNF8-217ENST00000576353 ACADSP16219 412 aa20.48■□□□□ 0.87
SNF8-217ENST00000576353 ADAM8P78325 824 aa20.48■□□□□ 0.87
SNF8-217ENST00000576353 PGGHGQ32M88 737 aa20.48■□□□□ 0.87
SNF8-217ENST00000576353 IQCCQ4KMZ1 466 aa20.48■□□□□ 0.87
SNF8-217ENST00000576353 ARMC4Q5T2S8 1044 aa20.48■□□□□ 0.87
SNF8-217ENST00000576353 LRFN4Q6PJG9 635 aa20.48■□□□□ 0.87
SNF8-217ENST00000576353 PIWIL3Q7Z3Z3 882 aaKnown RBP20.48■□□□□ 0.87
SNF8-217ENST00000576353 DHRS1Q96LJ7 313 aa20.48■□□□□ 0.87
SNF8-217ENST00000576353 TNFRSF13CQ96RJ3 184 aa20.48■□□□□ 0.87
SNF8-217ENST00000576353 SEPHS2Q99611 448 aa20.48■□□□□ 0.87
SNF8-217ENST00000576353 DHRS9Q9BPW9 319 aa20.48■□□□□ 0.87
SNF8-217ENST00000576353 KATNB1Q9BVA0 655 aa20.48■□□□□ 0.87
SNF8-217ENST00000576353 KRCC1Q9NPI7 259 aaPredicted RBP20.48■□□□□ 0.87
SNF8-217ENST00000576353 ATP23Q9Y6H3 246 aa20.48■□□□□ 0.87
SNF8-217ENST00000576353 RAI1Q7Z5J4 1906 aaPredicted RBP20.48■□□□□ 0.87
SNF8-217ENST00000576353 E7EQL1 145 aa20.47■□□□□ 0.87
SNF8-217ENST00000576353 DHHO43323 396 aa20.47■□□□□ 0.87
SNF8-217ENST00000576353 IGKV3-15P01624 115 aa20.47■□□□□ 0.87
SNF8-217ENST00000576353 IGLV1-44P01699 117 aa20.47■□□□□ 0.87
SNF8-217ENST00000576353 CRYAAP02489 173 aa20.47■□□□□ 0.87
SNF8-217ENST00000576353 FABP3P05413 133 aa20.47■□□□□ 0.87
SNF8-217ENST00000576353 QDPRP09417 244 aa20.47■□□□□ 0.87
SNF8-217ENST00000576353 B4GALT1P15291 398 aa20.47■□□□□ 0.87
SNF8-217ENST00000576353 HIST3H3Q16695 136 aa20.47■□□□□ 0.87
SNF8-217ENST00000576353 MTX3Q5HYI7 312 aa20.47■□□□□ 0.87
SNF8-217ENST00000576353 AGAP6Q5VW22 663 aa20.47■□□□□ 0.87
SNF8-217ENST00000576353 MEX3DQ86XN8 651 aaKnown RBP20.47■□□□□ 0.87
SNF8-217ENST00000576353 NOXO1Q8NFA2 376 aa20.47■□□□□ 0.87
SNF8-217ENST00000576353 NANOS1Q8WY41 292 aaKnown RBP20.47■□□□□ 0.87
SNF8-217ENST00000576353 PERPQ96FX8 193 aa20.47■□□□□ 0.87
SNF8-217ENST00000576353 GRIP2Q9C0E4 1043 aa20.47■□□□□ 0.87
SNF8-217ENST00000576353 NDEL1Q9GZM8 345 aa20.47■□□□□ 0.87
SNF8-217ENST00000576353 IL1RAPQ9NPH3 570 aa20.47■□□□□ 0.87
SNF8-217ENST00000576353 ZNF701Q9NV72 531 aaPredicted RBP20.47■□□□□ 0.87
SNF8-217ENST00000576353 TAS2R1Q9NYW7 299 aa20.47■□□□□ 0.87
SNF8-217ENST00000576353 MOKQ9UQ07 419 aa20.47■□□□□ 0.87
SNF8-217ENST00000576353 AKAP9Q99996 3911 aa20.46■□□□□ 0.87
SNF8-217ENST00000576353 TRAV27A0A087WT01 109 aa20.46■□□□□ 0.87
SNF8-217ENST00000576353 TRMUO75648 421 aaKnown RBP20.46■□□□□ 0.87
SNF8-217ENST00000576353 NR2C1P13056 603 aa20.46■□□□□ 0.87
SNF8-217ENST00000576353 GPR4P46093 362 aa20.46■□□□□ 0.87
SNF8-217ENST00000576353 PTH2RP49190 550 aa20.46■□□□□ 0.87
SNF8-217ENST00000576353 CTXN1P60606 82 aa20.46■□□□□ 0.87
SNF8-217ENST00000576353 RUNX1T1Q06455 604 aa20.46■□□□□ 0.87
SNF8-217ENST00000576353 TRIM25Q14258 630 aaKnown RBP20.46■□□□□ 0.87
SNF8-217ENST00000576353 ZNF544Q6NX49 715 aa20.46■□□□□ 0.87
SNF8-217ENST00000576353 PRSS57Q6UWY2 283 aa20.46■□□□□ 0.87
SNF8-217ENST00000576353 CYP2R1Q6VVX0 501 aa20.46■□□□□ 0.87
SNF8-217ENST00000576353 SYT14Q8NB59 555 aa20.46■□□□□ 0.87
SNF8-217ENST00000576353 OR13C2Q8NGS9 318 aa20.46■□□□□ 0.87
SNF8-217ENST00000576353 OR52J3Q8NH60 311 aa20.46■□□□□ 0.87
SNF8-217ENST00000576353 POP5Q969H6 163 aaKnown RBP20.46■□□□□ 0.87
SNF8-217ENST00000576353 MCHR2Q969V1 340 aa20.46■□□□□ 0.87
SNF8-217ENST00000576353 GTPBP3Q969Y2 492 aaKnown RBP20.46■□□□□ 0.87
SNF8-217ENST00000576353 ZNF347Q96SE7 839 aa20.46■□□□□ 0.87
SNF8-217ENST00000576353 DENND2DQ9H6A0 471 aaPredicted RBP20.46■□□□□ 0.87
SNF8-217ENST00000576353 DSCAMO60469 2012 aa20.46■□□□□ 0.87
SNF8-217ENST00000576353 TRBV4-1A0A0J9YWV2 114 aa20.45■□□□□ 0.86
SNF8-217ENST00000576353 ATP6V1G2-DDX39BF2Z307 99 aa20.45■□□□□ 0.86
SNF8-217ENST00000576353 OVOL3O00110 214 aa20.45■□□□□ 0.86
SNF8-217ENST00000576353 CDC42EP2O14613 210 aa20.45■□□□□ 0.86
SNF8-217ENST00000576353 GADD45GO95257 159 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms